KEGG   Kryptolebias marmoratus (mangrove rivulus): 108245999
Entry
108245999         CDS       T05608                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013  Nucleocytoplasmic transport
kmr03015  mRNA surveillance pathway
kmr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108245999 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    108245999 (rbm8a)
   03015 mRNA surveillance pathway
    108245999 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmr03019]
    108245999 (rbm8a)
   03041 Spliceosome [BR:kmr03041]
    108245999 (rbm8a)
Messenger RNA biogenesis [BR:kmr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108245999 (rbm8a)
Spliceosome [BR:kmr03041]
 Complex C
  Other components
   EJC/TREX
    108245999 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 YflT RRM_7
Other DBs
NCBI-GeneID: 108245999
NCBI-ProteinID: XP_017288789
UniProt: A0A3Q3G5G9
LinkDB
Position
LG16:complement(1573741..1577432)
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGLEEGARSRAKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNAQELMGQTISVDWAFVRGPPKNKRRGGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtgttggatcttcatgaggcgggaggcgaggactttcctatggatgaggat
ggcgatgagagcatccacaaactgaaagagaaagctaagaagagaaaaggacgaggcttt
ggcttagaggagggagccaggtccagagctaaagaggactatgataccgtggagcaagat
ggagatgagccaggtcctcagagatctgtggagggctggatcctgtttgtgactggcgtg
cacgaggaggccacagaagaagacatccatgacaagttctcagagttcggtgaaatcaag
aacctgcatctgaacctcgaccgtagaacaggctacctgaagggctatgcgctggtggag
tatgagacgtacaaagaggcgcaggcagccatggaggggcttaacgctcaggaactgatg
ggtcagactatcagcgtagactgggcgtttgtcagaggaccccccaagaacaaaaggagg
ggtggcgggcgaaggcgtagcagaagtccagacagaagacggcgttga

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