Kryptolebias marmoratus (mangrove rivulus): 108246081
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Entry
108246081 CDS
T05608
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03266
Virion - Herpesvirus
kmr04145
Phagosome
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04810
Regulation of actin cytoskeleton
kmr04820
Cytoskeleton in muscle cells
kmr05100
Bacterial invasion of epithelial cells
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
108246081
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108246081
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108246081
09144 Cellular community - eukaryotes
04510 Focal adhesion
108246081
09142 Cell motility
04820 Cytoskeleton in muscle cells
108246081
04810 Regulation of actin cytoskeleton
108246081
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108246081
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
108246081
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108246081
04515 Cell adhesion molecules [BR:
kmr04515
]
108246081
04090 CD molecules [BR:
kmr04090
]
108246081
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108246081
Cell adhesion molecules [BR:
kmr04515
]
Integrins
Integrin alpha subunits
108246081
CD molecules [BR:
kmr04090
]
Proteins
108246081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
108246081
NCBI-ProteinID:
XP_017288924
UniProt:
A0A3Q3B044
LinkDB
All DBs
Position
LG4:complement(30369765..30441349)
Genome browser
AA seq
1047 aa
AA seq
DB search
MAAAPGPPPPAPAALLLPGLALVIRLCAAFNLDAESRVVFTGPRGSHFGYSVEFFGNSSS
ISILIGAPKSNTSQPAITEGGAVYLCPWSQTNCSVINFDKQGDRYFYINGVNTQVEFKSH
QWFGATVRSHGNSILACAPRYYWRTEHDAPFSDVTGTCYLSVDSLKTFVEFAPCRTERHG
PAGQGYCQGGFSADFTKDGRVVLGGPGSFYWQGQLISATTEEIVKAYYPSYFLLSVAGQI
QTQQVQGSYDDSYLGYSVTTGEFSGDGEEDFITGVPRGLMLHGLVSILNGADLKSLLNLT
GEQMGSYFGYSVAVTDINNDSLDDLAVGAPMFICRGSDGRLEEMGKVYVYLQRGPLLLQP
SQHQLLGSQAFGRFGSSLAPLGDLNQDGFNDMAIGCPYGGDDQQGLVFIYSGHSGGLNDA
PTQTLSGQWAVSSFPASFGFAMRGNRDLDQNGYPDLLVGAFGSDKAALYRARPIVNASAF
LTVQPTMFNQEEKTCFLFKRNKTISVSCVNISFCLLAHGKHLPPHLAFRVEVQLDSGKRN
KKESVRRALFLESQQPNLTTTFNLTHGESLCHDAKIYLRAEEEFRDKLSPIYISLNFSLD
PLAPPDIHGLRSILNYRTEQRVEQKAQIQLDCGEDNVCVPDLKLDVYSDRDEVYLGDENT
LSLTFNARNEGEGGAYEAELYVALPPEADYSGIARNNVSLTQLTCSYGADNQTRFVVCDL
GNPLQSGTSLWAGLRFTVPRLEDTHRSVQFKLQIQSKNANNSESDVVLCELEVAAMAEVL
LQGVSRPDEVIFPPPNFTARHSLADEQDVGPQLHQVFELVNNGPSPVSQSRLEVKCPLRA
RGHALLYPVEMTTEGPLSCASKTVFNALKLRLQPPATEASTSPKSRSEHHIWRREVHGEP
LTEEGNLTCGAVECWELRCNVGLLRKGGRVILSVRSRLWAETFIKRPYKQHILECLVHYE
VNRMPYTIPPKSKPSGSTKVVATVTWSTPDGPFSVPVWIIVLAVLAGLLLLALLIYLLYK
MGFFKRSDPYGTTMEKAHLKPQASSEA
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctcctggacctcctcctccggctccagccgcgctgctcctgccgggactg
gcgctcgtgatccggctgtgcgccgccttcaacctggacgcggagagccgggtggtgttc
acgggaccgcgcgggagtcacttcggttactcggtggagttcttcggaaactccagcagt
atcagtattttgatcggcgctcctaaatccaacaccagccagcccgccatcacagaagga
ggagcggtgtacttgtgtccctggagccaaactaactgcagcgttatcaactttgacaaa
caaggtgacaggtatttttacataaatggcgtgaacactcaggttgagttcaaatcccat
cagtggtttggagctactgtgcgttcccatggtaacagcatcttggcttgtgctcccagg
tattactggaggacggagcacgatgcccccttctctgacgttacaggaacctgctacctg
tctgttgacagcctcaaaacctttgtggaatttgccccgtgccgaacagaaagacatgga
cctgctggacagggctactgtcagggtggattcagtgccgacttcaccaaggatggaaga
gttgtgctcggtggacctggcagcttctactggcaaggtcagctgatctcagcaaccaca
gaggagattgttaaagcctactatccctcctacttcctgctgtcagtcgctgggcagatt
cagacgcaacaagtgcaggggagctatgatgacagttatctgggttattctgtgaccacc
ggcgagttcagcggggacggggaggaagatttcatcacaggagttccaagaggactcatg
ttgcatggtttagtgagcattttgaacggggcggatctgaagtctctgttgaacttgacg
ggggagcagatgggctcttactttggctactcagtggcagtcactgacatcaacaacgac
agtttggacgaccttgctgtgggagctccgatgttcatatgtcgggggtctgacgggcgt
ctggaggagatgggtaaggtgtacgtgtacctgcagagaggccctttgctgctccagcca
agccagcaccagctcctcggctcacaggctttcggccgattcggcagctctctggctcca
ctgggggacctcaaccaggatggatttaatgacatggccatcggctgtccctacggagga
gatgaccagcaggggctggttttcatctacagcggccactcaggaggactgaacgacgcg
cctactcagacgctctccggccaatgggctgtgagctcttttcctgccagttttggcttt
gccatgagaggcaacagagaccttgaccagaacgggtatccagacctacttgttggtgct
tttgggtcagataaggctgcactgtacagggctcgaccaatagtgaatgccagcgcattt
ctcactgtgcagccaacaatgtttaaccaggaggagaagacttgtttcctgttcaaacgg
aataaaaccatttctgtgtcttgtgtcaacatcagtttctgcctcctggctcacgggaag
cacctccctcctcatctagccttcagggtggaggtgcagttggacagtgggaagcgcaac
aagaaggagtctgtcaggagagctttgttcctggagagtcagcagcccaatctgacgacg
accttcaacctgacacacggcgaaagcttgtgtcatgacgccaagatctacctgcgggct
gaagaagagtttcgggataaactctctcccatctacatcagcctgaacttcagtctggac
cctctggcgccaccagacatacatggcctccgttccatcctgaattaccggacagaacaa
cgtgtggagcagaaggcccagatccagctggactgtggcgaggacaacgtgtgcgtccct
gatctgaagctggacgtttacagtgacagagatgaggtttacctgggcgacgaaaacacc
ctgagcttgacctttaacgccaggaacgagggcgagggcggggcttatgaggctgagctc
tacgtggcgttgccccctgaggccgactacagcgggatcgcacgcaacaacgtgagcttg
actcaactgacgtgcagctacggggcagataaccagacccgcttcgtcgtgtgcgacctg
ggaaaccccttacagtctggtaccagcttatgggctggccttcggttcaccgtcccaaga
ctggaggatactcacagatctgtccagtttaagctccagatacaaagtaaaaatgccaac
aactcggagagtgacgtggtgctgtgtgagctggaggttgctgccatggctgaagtcctt
ctgcagggtgtttcccggccagatgaagtcatctttcctccacccaattttaccgcccgt
cacagcctggcggacgagcaagatgtcggcccacaacttcaccaggtttttgagctggtg
aataatggtcccagtccggtgagccagtcaaggcttgaagtaaaatgtcccctgagggct
cgtggccacgcactgctctaccctgtggagatgaccaccgaggggccgctcagctgcgct
tccaaaacagtcttcaatgcactaaaactcaggcttcagcctccagccacagaggcctct
acgtcaccaaagtccagatctgagcatcacatctggaggagggaggtacatggagagcct
ctgactgaggaaggcaacctgacgtgcggtgctgtggaatgctgggagctgcgctgtaac
gtggggctgctgaggaaaggaggcagggtcatcctgagcgtacgctccagactctgggct
gaaactttcattaagcggccctataagcagcacatcctggagtgcttggttcactatgag
gtgaacaggatgccatacaccattcctcctaaatccaagccatctggatcaacaaaggtg
gtggccaccgtgacgtggagcacaccggacggtccgttctcagttccagtgtggatcatc
gtactggctgttctagctgggctgctgttactggctctgctcatatacctgctgtacaag
atgggcttctttaaacggtccgatccgtacggtaccaccatggagaaggcgcacctcaag
ccccaggcgtcctctgaagcgtag
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