Kryptolebias marmoratus (mangrove rivulus): 108246183
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Entry
108246183 CDS
T05608
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108246183 (med13a)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
108246183 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
108246183
NCBI-ProteinID:
XP_017289083
UniProt:
A0A3Q2ZDK2
LinkDB
All DBs
Position
LG13:21129752..21217996
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AA seq
2158 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRFVWQGHTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQPQGRRELWLFWWGDDPNFADLIHHELADDYNDQWENGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKHEKPINKSEHLSCAFTFFLHGESNVCTSVEI
NQHQPIYHLTEEHLALAQQATSPFQVILSPFGLNGTLTGQSFKMSDPPTQKLIEEWNQFY
PISPSAKEGVSEDEAEDMDWEDDSLASVEVLVGGVRMIYPACLVLVPQSDIPVLAPVGSS
HCTAVYPGGHQVPASQREPAMSLVTLTPPTSPEEAHTVDSHSAQKWVKMPSSSDAFSVDR
TSHHGGKIPRRLATQVVERVWQECNINRAQNKRKFSAATNGTCEEEVTEKLGAWDFVVPS
QKSYCSCSRHKSVKQRTGSTPGQAQSAGQPSQPPNKHKTGGEKPEKGEKQQKRPQTPFHH
RSLTSEETSIETEATVGQRLSMRGPDGGRFCSTDVAAISKAPQLHSGAISTGPSEQPNSP
QPPPLSPHPCEHPEESGEGIKNPSTPNGQHFYQLPPESCLVGVKGGGEEPGGPECLNPHF
HPHHPHPHSATSAYPEPPEPTVYVGAEVNQEDDSSHTPWRLFNLPRRKEAELPTPLLPGD
KLRDEASAAQDLVSVTELMSSSKGPLKVSEERVQMYRARRNQYLSAAVTDGDHEPEVDPY
DFEDGEVKFTFSSKKDKAGGEREPGKKHKGEDGGAGPLDDSQRAAANNRMASTSLMHETD
LVVSINDLEHLFNSDEDDLTTGSRRPMNGTDENSGYKEQKPSILDPVSCIGSDWPHMFPT
PPSLEQHTMGYSPMNMCSKEYNSMESNLGMTTLDGTSTLGGDFKIEVEESFCSPKPSEIK
DYSFVYKPELCQAFVGCSMFAPLKTLPSQCLPPVKVPEDCVYRPSWTMGREMLNPGHVMN
FLNKDSNIPSVGSTMDQDYNQTYTPQTHTPFMSNSAPPSNSGVGILPSPATPRFSAPTPR
TPRTPRTPRGPSSVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPFIPEAHSLYVTLI
LSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYLSDPIGEAQETCSCGFSAVVNRRYGN
GSGLFLEDELDIIGRSSDVSREAEKRFEELRLSSLEKTGVGRGDRVPDELILLLQDQCTN
PFSPISVVENETVTRGPSGAPVSPCVRVEERDYHSDCYMALEHGRQFMDNMSGGKVDEAL
VKSTCLHPWAKQNAVDVTSLCSQDVLRVLMSLQPVLQDAIQKKRTVRSWGFQGPLTWQQF
HKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDIGYLV
VCPDNEALLSGSKSFFRDLTAVYESCHLGQHRPISRGYPDGIVLVGGSAAKTLADQPVSE
WFLKAASSNSDAFTKLKLYAQVCRHNLAPYLASQTLDSSLFTQPSPPPSSNQTSSTQQSS
SSSSTASQQGSSGSNSSSSSSSSSGGSGNGSASSNNHTASSGQPGSTIPSAKPNSFPPFG
SMGSQSQSGQLGQQAGSQNAGTSGDNSNIQAQGPTEPPESTLEREKVGVPTDGESHAVMY
PPAIVVYIVDPFSYEESDGGSGPVPAHSSVWTLGLLRCYLEMLQFLPLHIRNSISVQIVP
CQYLLQPVRGEDRQIYAQHLKSLAFSVFTQCKRPLPTSTNVKSLTGFGPGLAIDTALRSP
ERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDLY
GELLETCIINIDIPNRARRKKGSVRRLGLQKLWDWCLGLVQMTSIPWRVVIGRLGRMGHG
ELKDWSILLSRGNLQSLSRRLKDMCRMCGISASDTPSILSVCLVAMEPQGSFIIMPDSVS
TGSVFGRSTTLNMQTSQLSTPQDTSCTHILVFPTSASVQVASSNYTNIDTNIDILNATTD
GPDGMGIFDLLDQNEFVDPDIINISPSTSPVHSPGSHYHHGGDGSKGQSTDRMESHEEVQ
NLLQQPLALGYFVSTVKAGPLPDWFWSACPQAQHQCPLFLKASLHLHASSLQSDELLHSK
HSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQMYNFIMNML
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttttgtaccgaacggggccagcttggaggattgccattccaatctattc
tgtctggctgacttgacagggatcaaatggaagaggtttgtgtggcagggtcacacctct
gcccccatcctcttcccggtgacagaggaggaccccatcctgtgcagcttcagccgctgc
ctgaaggccgacgtgctgagcgtgtggcggcgcagccagccgcagggccggagggagctg
tggctcttctggtggggcgacgacccgaacttcgctgacctcatccaccacgagcttgca
gacgattataacgatcagtgggagaacggcctttcctacgagtgtcgcactctgctgttc
aaagcgatccacaacttgctggagcgctgcctcatgaatcgcagctttgttcgcatcggc
aagtggttcgtcaagccctacgagaagcatgagaagcccatcaacaagagcgagcacctg
tcctgcgccttcaccttcttcttacacggagagagtaacgtgtgcaccagcgtggagatc
aaccaacaccagcccatctaccatctaacagaggagcacctcgctctggcccagcaggcg
accagcccgtttcaagtgatcctgagtccgtttggcctaaatgggacgctgaccggtcag
tcattcaagatgtcagatcctcccacacagaaactgattgaggagtggaaccagttttat
cccatcagccccagtgccaaggagggtgtttctgaagacgaggctgaggacatggactgg
gaggatgactctctggcctctgtagaggtcctcgttggtggtgttcgaatgatctaccca
gcctgcctggtcctggtacctcagtcagatatccctgtcttggcccctgtggggtcctcc
cactgcactgccgtctacccgggtggccaccaagtgcctgcttcccagcgagagcctgcc
atgtctttggtgaccctcacccctcccacgtcacctgaggaggcgcacacagtggactct
cactcggcccagaagtgggttaagatgccttcatcatctgacgcgttcagcgtggacaga
acaagtcaccacggaggaaagattccacgccggctggccactcaggtggtggagcgtgtc
tggcaagagtgcaatatcaaccgagcccagaacaagcggaagttttcagctgcaaccaat
ggtacctgcgaggaggaggtgacagagaaattgggagcttgggattttgtggtgccttcg
cagaagtcttactgcagctgttccagacacaaatcagtaaagcaacgaacaggcagcact
ccaggccaagctcagtcagcaggccagccctcccagcctccaaataagcacaaaactgga
ggagagaagcccgagaaaggtgaaaagcagcagaagagaccccaaacccccttccatcat
cgcagtctgaccagtgaggaaacatccatcgagacagaagcaacagtaggccaaaggctc
agcatgaggggtccagatgggggaagattttgctcgacggatgttgccgccatctcaaaa
gccccccagctccacagtggagcaatcagcactgggccttcagaacagcccaactctccc
caacctccaccacttagcccccacccctgtgagcatcctgaggagtcaggggagggcata
aagaacccttcaacccccaatggccaacacttttatcagctaccaccagagtcctgcctg
gtcggggtgaagggtggcggcgaggagcccggagggcccgagtgtctaaatccgcacttc
cacccccaccaccctcacccccactctgcaacctctgcctaccccgagcctcctgagccc
actgtgtatgtgggcgcagaagtaaaccaggaggatgacagctcacacacaccgtggagg
ttattcaacctgccccgcaggaaagaagccgagctgcccacgccgctgctgcctggggac
aagttgagagacgaggcctcagcggcacaggacctggtgtcagtcacagaattgatgtcg
tcatccaaaggtccgctgaaggtgtctgaagagcgtgttcagatgtatagagccaggagg
aaccagtacctgtctgctgctgtaaccgatggagatcatgagcccgaagtggacccctac
gactttgaggacggagaggtcaagttcacattctccagtaaaaaggataaagccggggga
gagcgcgagccaggcaagaaacacaagggggaagatggtggagctggccctttagatgat
tctcagcgtgcagctgcaaacaaccgcatggcctccaccagcctgatgcacgagacagac
ctggtggtttccatcaacgacctggaacaccttttcaactcggacgaggatgatctgacg
actggctccaggcgaccaatgaatggaacagatgagaattctggctacaaggaacaaaag
ccatccattttggaccctgtgtcttgcattggttcagactggccccatatgtttcccaca
cctccctccctggagcagcacaccatgggctactcccccatgaacatgtgcagcaaggag
tacaacagcatggagtccaacctgggcatgaccacgctggacggcacctccactctgggg
ggcgactttaagatagaagtggaggagagcttctgcagccccaaaccatctgagatcaag
gattattcctttgtgtacaagccagagctgtgtcaggcgtttgtaggctgctccatgttc
gcccctctgaagacgttgcccagccagtgtctcccacccgttaaagtaccggaggactgc
gtgtaccggcccagctggactatgggcagggagatgctgaacccggggcacgtgatgaac
ttcctcaacaaagacagtaatatccccagtgtgggcagcaccatggaccaggactacaac
cagacctacacccctcagacccacacaccctttatgtccaacagtgctccacccagtaac
agtggcgttggcatcctgccctctcctgccaccccgcgcttctcagcccccaccccacgc
acgcctcggaccccgcgcacaccccgaggcccctcaagcgtccagggctcattaaaatac
gagaattctgacctatactcaccagcgtccaccccctccacgtgccgacctctaaactcc
gtggagcccgccacagtacccttcatccccgaagcccacagcctctatgtcacgctcatc
ctctccgagtccgtcatgaacctcttcaaggactgtaactttgacagctgctgcatctgt
gtgtgcaacatgaatataaaaggagccgatgtgggcgtgtacctgagcgaccccatcggc
gaggcccaggagacgtgcagctgcggcttcagcgccgtggtcaaccggcgttacgggaat
ggctccgggctcttcttggaggacgagctggacatcatcggccgcagttcggacgtcagc
agggaggcagaaaagcgcttcgaggaactgcggctctcctcgctcgagaaaaccggagtt
ggaagaggggaccgtgtcccggacgagctgattctgctgctgcaggaccagtgcacgaac
cccttttcgcccatttccgtggtggagaacgaaactgtgacgcgggggccgagcggggcc
cccgtttccccttgtgtaagggtggaggagagagactaccacagcgactgctacatggca
ctggagcacggcaggcagttcatggacaacatgtcaggcggcaaggtggacgaggcgctg
gtgaagagcacctgtctgcacccctgggccaaacaaaacgctgtggacgtcacttcactg
tgctctcaggatgtgctgcgggtgctgatgtcgctccagcccgtactccaggatgctatc
cagaagaaaaggacggtgcggtcatggggctttcagggtcctctcacctggcagcagttc
cacaagatggccggacgtggctcttatggcacagacgagtctcccgagcctctgcccatc
cccaccttcctggttggttatgagtatgactttgtggttctgtctccgtttggtctgccc
tattgggagaaactgctgctggatccatttggctctcagcgggacatcgggtatctagtt
gtttgtcctgacaacgaagccctgctcagcggctccaaaagcttcttccgagacctcact
gctgtctacgagtcttgtcacctgggacaacaccggcccatttcaagaggctatcctgat
ggcatagtacttgttggtggcagtgcagccaagaccctagcagatcagccagtcagtgag
tggttcctaaaggccgccagcagcaacagcgacgccttcaccaagctcaaactctatgca
caagtgtgccgccacaacctcgctccatacctcgcatcacagactttagacagttccctc
ttcacccagcccagcccccctccctcatccaatcagacatcatccacacaacagtctagc
tcctcctccagcacagccagccagcagggctcctctggttccaacagcagcagcagcagc
agcagcagcagcggcggttctggaaatggctctgcatcgtccaacaaccacacagcatct
tcaggccagcctggcagcacaatcccatctgccaagcccaactccttccctccctttgga
agcatgggaagccagtcccagagtggacagctgggacagcaggctggttcccagaatgct
ggcacctcaggggacaactccaacatccaggcccaggggcccacagagccacctgaaagc
actttggagcgggagaaggtaggcgtgcccacagatggggagtcccacgctgtgatgtat
ccgcctgccatcgttgtttacattgtggacccctttagctacgaggagtccgacggaggc
tcagggcccgttccagcccattccagtgtgtggacgctgggtttgctccgctgttacctg
gagatgctccagtttctgcccctacatatccgcaactctatttctgtacagattgtccca
tgccagtatctgcttcagcctgtacgaggtgaagaccgtcagatctacgcacagcacctc
aaatctctagcgttctctgtcttcactcagtgcaaacgaccgctgcccacctccaccaat
gtcaagtctttaaccggcttcggcccaggcttggccattgacacagcgctgaggagccca
gagaggccagagtgtcttcgtctgtacacccccccatttatcttagcaccagtaaaggac
aaacagacggagctgggcgagacgtttggcgaggcgtcgcaaaaatacaacgtgctcttt
gtgggatactgtttgtctcatgaccagagatggcttctggctacatgcactgacctgtat
ggggaactactggagacctgcatcatcaacatagacatacccaacagggcgcggaggaaa
aaggggtcagttcgtcgactcggcctgcagaagctgtgggattggtgtttgggactggtg
cagatgacatccattccctggagagtggtgattggccgtttaggcaggatggggcacgga
gagttaaaagactggagcattctgttgagccgaggaaacctgcagtcgctcagtcggcgt
ctgaaggacatgtgtcgaatgtgtggcatctctgcctcggacactcccagcatcctcagc
gtttgcttggtcgccatggagccgcagggatccttcatcatcatgccagactctgtgtcg
acaggctctgtgtttggccgcagcaccacgttaaacatgcagacctcgcagctcagcacc
ccgcaggacacctcctgtacccacatcctggtctttcccacctctgcctccgttcaagtt
gccagctctaattacaccaacatcgacaccaacatcgacattctcaacgccaccactgat
gggcctgatggtatggggatctttgacctgctggaccagaatgagtttgtggacccggat
atcatcaacatttcaccctccacgtcacctgtacactcccctggctctcattaccaccac
ggaggggatggtagtaaggggcaaagcacagaccggatggagtctcatgaagaggttcag
aacctcctgcagcagcctctggcacttggctactttgtctcgacggtgaaggctggccct
ctacccgactggttctggtcggcttgtccgcaggctcagcaccagtgtccactcttcctc
aaggcctctttgcacctccatgcgtcttcattgcaatcagatgaactactgcatagcaaa
cactcccaccccctcgactccaatcagacctcagatgtactcagattcgtactggagcag
tacaacgcactctcctggctcacgtgcgacccggccacgcaggaccgacgatcttgtctg
cccattcactttgtggtgctcaaccagatgtacaacttcatcatgaacatgttgtaa
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integrated database retrieval system
