Kryptolebias marmoratus (mangrove rivulus): 108246215
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Entry
108246215 CDS
T05608
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X3
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108246215 (mms19)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108246215 (mms19)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108246215 (mms19)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
108246215 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
RTP1_C1
HEAT_2
HEAT_ECM29
API5
PARG_cat_N
Motif
Other DBs
NCBI-GeneID:
108246215
NCBI-ProteinID:
XP_017289122
LinkDB
All DBs
Position
LG2:complement(34976079..35014306)
Genome browser
AA seq
1027 aa
AA seq
DB search
MAAVSPLLLSLVEEFVSGLQDSKAKEAAKGVKDGQFTMLQLVEALGVSLTSSQPHTRARG
VQLLSEVLQENYAELTEREVEVLTAFYENRLKDHYVVTPSVLRGLQELTKCTTLPPGSAV
SMLRSVFQDVHVQSLMLAERACIYNMLINLMETREAELKGLGADFVFGFVQSMDGERDPR
NLLLAFQIAKNIVLQGYNLGKFTEELFEVTSCYYPIDFTPPPNDPHGITKEELILGLRAV
LTGTPKFAEFLLPLLIEKLDSDVQSAKLDSLQTLAACMSQYESKDLAEFLEGLWASLRRE
VFQTSSEKMESAALAALAALTSCLSRSVLSSDSEDTLSTFLDLILRDCKHHLSEPDLKLV
WPSAKLLQASCSASNRASYVITAAIMPSLIKQFNSRTQCSHRRTLLEVVQRFIQSVNTSQ
SSDIDESVFSEYRAALCSMVFSALSESNSSLQITAASVLNSLAQQTGLLLDSDIQLAVDH
LTRLLLAEEDERVSSAVVDCAGALAEQHPAAFITKLIPRLKEELFSDTESFELRYHPAVH
RRCLAALAAVSIQPSVVQESSPVLLDVLSSAHSGSTRFSVDEVVLACRSLQRIAEQVKDT
EEAGQCFHDVIIPRLLSLALQAALQNEGPSGPCSPLTKEEVLSAMVPVISTACSRLQPTL
AGQTVLRVVSLFLDGDVSFLPDNAFPSHIQLLKQQQQGMKASWSQSQLVCLLMACVCSLP
RNVEVPQMERLLSQLEELSCSCSHLLSYSSAAKCFAGLINKRPQGESLDSSIQRTMQRVC
SELDCPSSPVRTQVFTLMIWVAKALLLRYHPLFSILTDKLFSLLGDPDLGPMAAASFSLL
MSDTEDILNRRCHANMRIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALSNIITKLPK
QVQVSELPALLSLLLEALTCPDQGVQLSTLSCLEPVLLNPPPVLIQQLEALISRLLALVC
SPAMKIRITSIRCIHALSQFPVHEVLPFRARVLRALAQPLDDRKRLVRREAVQARGEWFL
LGSPVGR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagtgagtcctttgctactgtctctggtggaggaatttgtctccggactacag
gacagcaaggcaaaggaggctgctaaaggcgttaaagatggacaattcacaatgctgcag
ctggtggaagcactcggagtaagcctgactagttctcagcctcacacccgagctcgaggg
gtccagctcctctctgaagttttacaggagaactacgcagagcttacagagagagaagtg
gaggtgcttactgccttctatgaaaaccgcctcaaagaccattatgtcgtcacaccatct
gttttacgtggacttcaagagttgactaaatgtactactttgccacctggttcagctgta
tccatgctacgttctgtgtttcaggatgtccatgtacagtcactgatgcttgcagagaga
gcgtgcatctacaacatgctcatcaacctcatggaaaccagagaagctgagctgaaaggt
ttgggggctgactttgtttttggttttgtccaatcaatggatggagaaagggatccccgc
aacctcttgttagccttccaaatagccaaaaacattgttctgcaaggatacaatttaggt
aaattcacagaggaactgttcgaagtgacgtcctgctattaccccatagacttcaccccc
ccccccaatgacccccacggtatcaccaaagaggaattaattctgggattgagggctgtc
ctcacaggaactcctaaatttgctgagtttctgttaccgctcctcattgagaagctggac
tcagacgttcagagtgccaagttggactcactgcagactctggctgcttgtatgtcacaa
tacgagagcaaagacttggcagaattcctcgagggactatgggcgtcactgcgcagagag
gtgtttcagacctccagcgagaagatggagtctgcagcgctcgctgctctcgccgcactc
acttcctgtctgtctcgttcagtcctcagctctgactctgaagacactctcagcactttc
ctggatcttattctcagagactgcaagcatcatctgagtgaacctgatctgaagctagta
tggcccagtgccaaactgctccaggcctcctgcagcgcctccaacagggctagttatgtc
ataacagccgccattatgccatctctgatcaagcagtttaacagcagaacacagtgttct
cacagacggacgttgttggaagtggtgcaacgattcatccagtcggtgaacacaagtcag
tcttcagatattgatgagagtgtgttttcagaatacagagcagctttgtgcagcatggtg
ttttcagctctctctgagagtaattctagtctgcagatcactgctgcctctgttcttaac
tcactggcacaacaaacaggcctgcttttagactctgacatccaacttgctgttgatcac
ttgaccagactgttgctggcagaggaggatgaaagagtcagttccgctgtggtggactgt
gctggagctttagcagagcagcatccggcggccttcatcactaaactgatcccaaggctg
aaggaggagttgttttctgacacagaatcttttgagctacgttaccatcctgcggtgcat
cggaggtgtttagctgctctggcagctgtgtccatccaacccagtgttgtccaggagagt
tcacctgtcctcctggatgtccttagttcagcacattcaggtagcactcgtttctctgtg
gatgaggtggtgctggcgtgccgcagcctgcagaggatagcagagcaggttaaggacact
gaagaggcggggcagtgtttccatgatgtcatcatcccacgccttctgtctttggcactg
caggctgcactgcagaatgaggggccatctggtccttgtagtcctctgacaaaagaggag
gtcctgtctgcaatggtgcctgtcatcagtactgcctgctcccggctgcaacccacgttg
gcaggacagacagtattaagggtggtgtctctcttcctggatggtgatgtctcctttttg
cctgataacgccttcccttctcacattcagctgcttaagcagcagcaacagggaatgaaa
gcatcgtggagtcagtctcagttggtctgtctgcttatggcctgtgtgtgttcattacca
cgtaatgtggaggtgccccagatggagcgcctgctgtcacagctggaggagctgagttgc
agctgcagccacctgctgtcctacagctctgctgctaagtgcttcgcaggcctgatcaac
aagagacctcagggtgaatctctcgacagctcaatacagagaacaatgcagcgagtgtgc
agtgagttggactgtccctcctcccctgtccgcacccaggtcttcacactgatgatttgg
gtggccaaggctctgctcctgcggtaccaccctctgttctcaattctgactgacaaactc
ttctctttgctcggtgatcccgatctgggtccaatggcagcagccagcttctctctgctg
atgagtgacaccgaggacatcttgaaccgcagatgccacgcaaacatgcgcatcatgtat
cgccaacgcttcttcagtgaaaactcagccaagctggtccagggcttcaatgctgcaccg
caagagaagaagcccaactacttgaaggctctgtcgaacattatcactaagctgcctaag
caggtccaagtctccgagctgccagcgctattgtctctgttactggaggctttgacatgt
cccgatcagggcgtccagctgtccactctgtcctgcctggagcctgtcctcctgaacccc
ccaccagttctcatccagcagctggaagctttgatcagcaggttactggcccttgtctgc
agtccggccatgaaaataaggatcacctcaatacgctgcatccacgctctgtcccagttt
cctgtgcatgaggttttgccatttcgagcacgggtgctgcgagcattggcccagcctctg
gatgacaggaagaggctggtgaggagggaagcagttcaggcccgaggagagtggttcctc
ttaggaagtcctgtggggaggtga
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integrated database retrieval system
