Kryptolebias marmoratus (mangrove rivulus): 108246223
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Entry
108246223 CDS
T05608
Symbol
nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108246223 (nfkb2)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
108246223 (nfkb2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Spatacsin_C
CIS_TMP
Motif
Other DBs
NCBI-GeneID:
108246223
NCBI-ProteinID:
XP_017289139
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All DBs
Position
LG22:complement(6691607..6723158)
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AA seq
902 aa
AA seq
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MAGALRMTEAQFMNYDTELQLNLMPYDYIPPVDIKTEPYIPETAHGPYIQIIEEPKQRGF
RFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGLARVEVQLVTHTDPARVHAHSLVG
RHCNESGTCTLDIGPNELTASFSNLGILHVTKKGVVEVLTRRLRDERKRQKGTQYDLTDA
EEMSILKEAKELGKTMDLNIVRLRFTAYLQDSTGAFTRALKPVVSNPIYDSKSPNASNLK
ISRMDKTCGSVLGGDEIFLLCDKVQKDDIEIRFYEEDDEGGWEAFGDFSPTDVHKQYAIV
FKTPAYHSTEIPRPVTVFLQLRRKKAGDSSDPKQFTYIPQVQDREEVLRKKQKLLPHYES
WRGGGGAGGRGGGAGGFGGAAGGGGAGGFQFHQQVNGGTGGGGGAFYAGNFTGFTSGGGT
QMSGSTPQTNVASLRSDSQTSSPLQQQLLQIAATLSSRVSQSAQQTAAALLQYCSTGDAR
VLLALQRHLCGIQDANGDTPLHLAIIHLQTTVIQQLIQTLLSSQQHRVLNTANHLQQTPL
HLAVITRQPKVAELLMRAGADPSLVDKDGRSPLHLAALSGDTEMLRLLLTHLGERHSHLV
NTSDYQGLQPLHLAVRRDGERCLRLLVEGGAKINAQEQKSGHTALHLAVRENLFKVACTL
ITELKADVNACTFGGNTPLHLASSVGSPTFCAMLIAAGADKNMENDEPLFFSSSSDEEDN
IPIRKELAERDAATQTVKSRKRPAGGHTPLDLATCLKVKNVLNDRQSPKPSRPKKIKPSS
SFEEGEHSALDEDTLSRLVEVLSVGDVPWMKLAEKLGMMTLTHLYRDSQTPCQHLLQHYK
VGGGPVEVLVEALQSLGLTEGVRLLRNTELQDDKHSTDATVDSGFSSQPMEEQEEEPAMA
NQ
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggctggagctctgaggatgactgaagctcagttcatgaactacgacaccgaactgcag
ctcaatttgatgccctacgactacattcctccagtggacataaagactgagccctacata
cctgagacagctcatggaccgtatattcagatcattgaagagcccaaacagaggggtttc
cgtttccgatatgagtgtgagggtccgtcgcacggtgggctcccaggggcctctagtgag
aagaacaggaggacttacccgaccgtgaagatcaataactatgtgggcctcgcccgggtg
gaggtgcagctggtgacgcacactgacccggcccgagtccatgcacacagcctggtggga
cgccactgcaacgagagtggcacctgcactctggacatcggccccaacgagctcactgcc
tcgttcagtaatctgggaatcctccatgtgaccaagaaaggtgtcgtagaggttttgacc
agaaggctgagagacgagaggaagagacagaagggaacgcaatatgacctgacagatgct
gaagaaatgtccatcctgaaggaggccaaggagctcgggaagaccatggacctgaacatc
gtccggctcaggttcactgcctacctgcaggacagcaccggggctttcaccagagcccta
aagccggtcgtgtccaaccccatctacgacagcaagtcacccaacgcctccaacctaaag
atctcccgcatggataagacctgcggctcggttcttggaggagatgagatcttcctgctc
tgcgacaaagtccagaaagatgacattgagattcgattctacgaggaggacgacgaggga
ggctgggaggcattcggggacttctcccccaccgatgttcacaaacagtatgccattgtg
ttcaaaacaccggcctatcacagcacagagatcccgcggcccgtcaccgtcttcctgcag
ctcaggaggaagaaggccggcgacagcagcgacccaaaacagttcacctacatcccccag
gtccaagacagagaggaggtgttgagaaagaagcagaagctgctgcctcactacgagtcg
tggagaggaggaggaggagcgggaggaagaggaggaggagctgggggatttggaggagct
gcaggaggaggaggagctggaggtttccagttccaccagcaggtgaacggaggtacagga
ggtggaggcggagctttttatgcaggaaacttcacaggttttacttcagggggaggaact
cagatgtcaggctccacccctcagactaatgttgcctctctgagaagtgattcacagacg
agctcgccactgcagcagcagctgcttcagattgctgcaacgctcagcagtcgggtgtct
cagagcgcccaacagaccgccgccgccctgctacagtactgcagcactggagacgcccgc
gtcctcctcgccctgcagagacatctgtgtggaattcaggacgccaatggagacactcca
ttacacctggccatcatccacctgcagaccaccgtcatccagcagctgatccaaactctg
ctgagcagccagcagcacagagtcctgaacacagccaaccacctgcagcagactcccctc
cacctggcagtgataacacggcagccgaaggtggcggagctgttaatgagagcgggggcc
gaccccagcctagtggacaaagatggccgcagccccctccacctggcagcactgagcgga
gacactgagatgctccgcctactgctgactcacctgggagaacgccactcccacctggtc
aacacgtcagattaccagggtcttcagccgctccacctggctgtgaggagggatggcgag
cgctgcctccgtctactggtggagggcggagccaaaataaacgcccaggagcagaagagt
gggcacacagctcttcacctggctgtcagagaaaacctgttcaaggtggcctgcacgctc
atcacagagctgaaagcagacgttaacgcctgcacgtttggaggaaacacaccattacac
ctggcttcgagtgtgggctcaccaacgttctgtgccatgctcattgctgcaggagctgat
aagaacatggagaacgacgagcccctcttcttcagttcttcctccgatgaggaggataac
ataccaatcagaaaggaactcgcagagcgagatgctgccacgcaaacagtcaaaagtcgc
aagagacctgcaggaggacacacacctctggacctcgctacctgtctgaaggtgaagaac
gtgttgaacgaccgacagagtccgaagccgagtcggccgaagaagatcaaaccaagcagc
agctttgaagaaggcgagcactcggcgctggacgaggacacgttgtcccggctggtggag
gttctgagtgtcggagacgttccctggatgaagctggctgagaagctgggtatgatgacg
ctaactcacctgtaccgggacagtcagacgccgtgccaacacctgctgcagcactacaag
gtgggtggaggtcctgttgaagttctggttgaagctcttcagtctctcggtttgacagaa
ggagtcagactgctgaggaacaccgagctacaagacgacaaacacagcacagatgccaca
gtcgacagcggcttcagcagccagccaatggaagagcaggaggaggagccagcaatggcc
aatcagtga
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