Kryptolebias marmoratus (mangrove rivulus): 108246327
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Entry
108246327 CDS
T05608
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108246327
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108246327
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
108246327
NCBI-ProteinID:
XP_017289288
UniProt:
A0A3Q2ZXH0
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All DBs
Position
LG2:8242282..8253136
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AA seq
671 aa
AA seq
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MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHIYLEHWLADCTEIHILEA
EANNAATVSQWHQEPKEKVVSLLLSHLPLLQPRNCEAKCEYMKLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRTSLAMWLNHLEEHLSSGYASRAPSSPYHPRQGSDEWPSSA
EALDPGNVWHDKSPSSSTSPAGQNGHMAFPGGMPSPINSNNTGLVGQIQPSPLKKSMSNI
PSSPQTCGSEWINQDDTGGRQNFIPTDHAPLSPQSSIASSGSEQTEEQSCSRNTFLEDGS
GMKDVPAWLKSLRLHKYASLFSQMTYEEMMILTEQHLESQNVTKGARHKIALSIQKLRER
QSVLKSLEKDILEGGNLRNALQELQQIIITPIKPYSPPSAAQPASDASSSSSEVTKTGVD
KEAAPEDFQTNNQPPCDGDSSVTPVSDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQ
LIEKGLTHEAFTETHKKRLVSWKQQVLNLLRLFPRKAMPDMPAYRQKGWNYGSNSLPTAG
SVSGGVSRRGQRQFQMTPRGPPTGRMCLPGGIGGASPRHTLTNPALAGQGRQNLWFANPG
GSNSMPSQSRSSVQRTHSLPVHTSPQTMLLFQQQECQVPGADLEINPTLESLCLSMTEHA
LGDGTDRTSTI
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgagaccaggtaggtatcctcacagattggttcaaaggctggaatgagtgt
gaacagacggtggcactcttgtcgctcctgaagagggtgtcccgcacccaggcccgcttt
ctccacatatatcttgaacactggctggcagactgcacggagatccacatccttgaagct
gaggccaacaatgcagcaactgtcagccagtggcatcaggaacctaaagagaaagtggtg
tccttgctgttatcccatttgcctctgctgcagccacgtaactgtgaggccaaatgtgag
tacatgaagctgctgcagaaggtgttgagtcacacaatcgagagcagcctctttgtggaa
gaaagcagacagctgctctcctatgcactcatccaccctgccaccaccctggatgaccgg
acctcactggccatgtggctaaaccacttggaggagcacctttccagtggctatgcatcc
cgggcaccatctagcccataccatccccgtcagggctcagatgaatggccgagctctgct
gaggctcttgatcctggtaacgtttggcacgataagtctccttcatcgagcacatctcct
gcgggccagaacggacacatggctttcccaggcgggatgccctcacctattaacagcaat
aatacaggtttggttgggcagattcagcctagcccgctgaagaagtccatgtccaatatt
ccttccagtcctcagacttgtggctctgagtggataaaccaggatgacacaggggggcga
cagaacttcatcccaacagaccacgcacctctttcaccccaaagcagcatagcttcttca
ggcagtgagcagacagaagagcagagctgctctcgcaacaccttcctggaggatggaagt
ggcatgaaagacgttcctgcctggttgaagagtcttcggcttcataaatatgcatcgcta
ttttcgcagatgacctatgaggagatgatgatcctcacagagcagcatctagaatctcag
aatgtcactaaaggagcacgacacaagattgccttgagtatccagaaactgcgagagaga
caaagtgttctcaagtctttagaaaaggatattttggaaggtggaaacctgcgcaacgcc
ctccaggagcttcagcagatcatcatcacgcccattaagccctacagtccacccagtgca
gcacagcctgcctcggacgcctcatcgtcctcgtcagaagtcacaaaaacaggagtggat
aaagaggcagcaccagaagacttccaaaccaacaaccaacccccctgtgatggagactcc
tcggtcacaccagtctctgatggggacattgctggacagtttacccgtgttatgggcaaa
gtgtgcacccagctgctggtatcgaggccagatgaggaaaatattagctgttaccttcag
ctcatagagaagggtctgacacacgaagctttcacggagactcataagaaaaggctggtt
tcttggaagcagcaggtcctcaacttgctgcgcctgtttcctcggaaagctatgccggac
atgccagcataccgacagaaaggctggaactatgggtcaaactccctccccacagcaggc
tctgtgagcggaggtgtaagccggcggggccaaaggcagttccagatgacccctcgtgga
cccccaactgggcgcatgtgtcttcctggcgggatcgggggagcgtctccacgccacact
ctcactaatcctgcattggcaggccagggtagacaaaacctgtggtttgccaaccctggg
ggcagtaacagcatgccaagtcagagtcgcagctcagtgcagcggacccactccctccct
gtccacacgtccccacaaaccatgctcttgttccagcaacaagaatgccaagttccaggt
gctgacctggagatcaaccccacgctggagtcactgtgcctcagtatgacagagcatgcc
ttaggggatggaacagaccggacatcaacgatatga
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