Kryptolebias marmoratus (mangrove rivulus): 108246379
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Entry
108246379 CDS
T05608
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108246379
04518 Integrin signaling
108246379
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108246379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
kmr00536
]
108246379
Glycosaminoglycan binding proteins [BR:
kmr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108246379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
EGF_2
Fibrinogen_C
EGF_Tenascin
fn3
hEGF
DUF7949
EGF
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
EGF_integrin
Big_5
Motif
Other DBs
NCBI-GeneID:
108246379
NCBI-ProteinID:
XP_024865787
LinkDB
All DBs
Position
LG5:complement(4285505..4325697)
Genome browser
AA seq
2286 aa
AA seq
DB search
MLPLTSSLIVLLLAGSALLTPETSTELQAGGERRPRDAEQDSIKVVISEGCTSQGDSSNA
SQEGKEINLDPGSPLVLTHRIKLVPSGQGSGLCGCEADFAALRERLESLEREVSDLREKC
GGAEGSCCTSESKGAGCSIKSELKGCPSECSDQGRCVDGKCVCFAGYSGPDCSESSCPGN
CNNNGRCVNGQCVCDPGFSDLNCSQRVCPDNCNDQGKCVNGKCVCDSGFTGPSCSEESCP
GNCNRRGRCVKGQCVCNPGFTGSDCSKKACPDNCNNRGRCVNGKCVCSSGFTGADCSETA
CPRNCNNRGRCINGKCVCNNGFTGADCSERDCPNNCSNRGKCVNGKCVCKRGFTGADCSE
IACPRNCNNRGRCINGQCVCNDGFTGTDCSKKACLNNCSNQGRCVGGKCVCDSGFTSADC
SEIACPGNCNNRGRCINGQCVCNVGFTGADCLEKACPNNCNQGGSCVDGKCVCNSGFSGA
DCSEIACPENCNNRGRCINGHCSCDDGFTGADCSEKACPNNCNNQGRCVDGKCVCDSGFT
SEDCSEIACPGNCNNRGHCINGQCVCNDGFTGADCSEKACPNSCNNQGRCVNGKCVCNVG
FTGPDCAAKGCPNNCNKKGVCLKGKCVCRGGFTGSDCSQCKEGKTGPKCNLAMTGVSLTS
QDITESSVTLIWTKPFLQYETYYITFTSLKESSEQITVQVDGSLTTFTQTGLAVGQGYSV
KIVGEIEGRKGAESTTEFTTLISAPTNLHVVKTTSSSAVVQWEASQGEVDRYRLTFLPSD
GAGTSQEMIISAGQTSAHIHQLEAGRLYKIFLVAEKGLIRSQPVSTQVVPGSTLSRVTTE
DLNTQVTQAPGHDVGSKDQKLNLSPGGQVVDQQGVRNRDSANVEDSSAGIIAKTKPLMAR
NGTGPRVVGRPVLSKSKVPGFFRFNATSGRRRLVPGSIHKKPVVAEKGKVMEINNPQPDV
LTIRDSGKDQSEEASSSEKSEHIRPAVMPGSDSETNRQRSSEEPTSAIGSKRQPDVGIAI
PGNDTDLVSLNTTGTIQSQEKKCLNKIKVTHFRLPLKDRSNTYRGNGTGLQGNTLGSNSN
ETPPHKEADLDYTQDSLQKLIRNTYNNLNITTISVHLFKPLNLSTDADIVRTQILKGVEQ
FSGLSSELSSSDDDAAEPPSSLKYLISSSPSPLVPHSSSSPSSLPLLSPSSSSSSSNEFD
SHDSTELNSSTDSPLTEDRKLSRSDKHTRPLFLQTLPKRGSIRRVYPNFELLRNKTNQNL
RIPDHPPSHLSHTPKQEAEVNLPMKDVSSDKDAKTTLVSSGVEHGQTNRARGKIPVRRPY
LKGSYPRRLFSNVRNQTRSNLRYFTQPSKPSNSNFTQPSQPSNPKRDTQKEHLFPTELPA
TSPSVSGAGPVSGGNEGKVGTRLYTASSSTELDQTTIRRGVPFFRRPNFRRPLLRGKSFQ
NETFTNLRQHQYPYRGFVRKPFLTRKQNVGNFTAGSQTNQLGKVNNPENPEIQSQHRNVH
RSFHSSLTNKSREEENVHLSQIALTDGHEPTASKETKESEKGGNALIELEAITDSANHKV
RLNAGRNIGAANLGSPSIKNTFRPLRPVTVLNRQSLSRTIMAKHHDTHSNSDTQNKEHLK
ANQTAKSIYDSEQTADIESDVSSSDVTREPLDFVGVTNRTSSGYTLVWDSPEGKYKNFLV
SRTEVKQDEGLQQKESTQKEDKDQNIKDSVSENGGHKDDNRVPESFGPQVPNTQDGTVAK
STGSNKVFKKVLPGSARSLQFEHLPPQTEYTLTLLGGGPGLLSRLHKLVISTGPEPPSNI
VFSKVTENSLTVSWTKPRSSVSGFKVTYTQSDDEEPVSVSVDSEDSTVNLSQLSPGLSYE
VTIISTLGLDESDPVKDFVTTLPDPPSDLQALNVTDTTALLLWRPALAAVDKYAIVYGSE
SGSGLRITVSGNTAEQRLSGLEESTTYTVTITSQLGGQESSSATTSFTTSSSSAGDFDEA
RDLQAKNVTPRTADVSWTPPIKPVDRYILSYQTEGEKSEEIIVGPNETQYKLTRLHPGSL
YDVNLRSLRGAQLSANTFTKFTTGKLQFPFPTDCSQELLNGVLTSDTMEIFPHGKLGKSM
MVYCDMETDGGGWTVFQRRKDGSEDFYRNFNDYVEGFGNLNGEFWLGLEKLHNLTTMTRM
NLRVDLRDEGEQVFAQYSTFQVAKRNYKLTVGGYSGTAGDSLTYHNDCAFTAKDRSPLLG
LFRCAISYQGGWWYNNCHEANLNGLYGNNYKHQGVIWKSWKGEHHSIQFTEMKLRPANFR
TPSRGL
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctcacctcctccctcatcgtcctccttctggctggatcagctctcctgacc
ccagaaacctccactgagctacaggccggaggcgagaggagaccaagagatgctgagcag
gactccattaaggtagtgatctcagagggatgcacctcacagggagattcatctaatgcc
agccaagaaggtaaagaaatcaatctggatcctggttctcctctggtcctgacccatcgg
atcaagctggttccatcaggacaggggtctgggttatgtggctgcgaggcggacttcgct
gccctgcgggaacgactggagagtttggagagggaggtgtccgacctacgagagaagtgt
gggggagctgagggaagctgctgcacctcggagagcaaaggtgcaggttgttcgataaaa
tcagagctcaagggctgtcccagtgagtgcagcgatcagggccgctgcgtggatggcaag
tgtgtctgcttcgctggttacagtgggccagactgcagcgagtccagctgccccgggaac
tgcaacaacaacgggagatgtgtgaatggacagtgtgtgtgcgatcctggcttctctgat
ctaaactgctcccagagagtctgcccggacaactgcaacgaccagggcaagtgcgtgaat
ggcaaatgtgtgtgtgacagtggcttcacagggccaagttgctcagaagaatcctgccct
ggcaactgtaacagaagggggcgctgtgttaaaggacagtgtgtgtgtaatcctggattc
acaggttcagattgctctaaaaaggcctgtcctgacaactgcaacaaccgtggcagatgt
gtgaatggtaaatgtgtctgctctagtggcttcactggtgctgactgctctgagacagcc
tgtcccaggaactgcaacaacagggggcgctgcatcaatggaaagtgtgtttgtaataat
ggattcactggtgcagactgctctgaaagggattgccccaacaactgcagcaaccgtggg
aagtgtgttaatggtaaatgtgtctgcaaaaggggttttaccggtgcagactgctctgag
atagcctgtcctaggaactgcaacaacagggggcgctgcatcaatggacaatgcgtttgt
aatgatggattcactggtactgactgctctaaaaaggcttgcctcaacaactgcagcaat
caggggaggtgtgttggtggtaaatgtgtctgtgacagtggttttactagtgcagactgc
tctgagatagcctgtccaggaaactgcaacaacagggggcgctgcatcaatggacaatgt
gtttgtaatgttggattcactggtgctgactgcctggaaaaagcatgccctaataattgt
aaccaaggcgggagctgcgttgatggaaaatgtgtctgcaacagtggcttcagtggtgcc
gattgctctgaaattgcctgtcctgagaactgcaacaacagggggcgctgcatcaatgga
cactgttcttgtgatgatggattcactggtgctgactgctctgaaaaggcttgtcccaac
aactgcaacaatcaggggaggtgtgttgatggtaaatgtgtctgtgacagtggtttcacc
agtgaagactgctccgagattgcctgtcctgggaactgcaacaacagggggcactgcatc
aatggtcaatgtgtttgcaacgatggattcactggtgctgactgctctgaaaaggcttgc
cccaacagctgcaacaatcaggggaggtgtgtgaatgggaagtgtgtttgcaatgttggc
ttcacagggccagactgtgctgccaaaggctgtcccaacaactgcaacaaaaaaggagtg
tgcctaaaagggaagtgtgtatgccgaggtggattcaccggatccgactgcagccaatgt
aaagagggcaagactggacccaaatgtaatcttgccatgacaggcgtctctctgacatct
caggacatcacggagtcgtctgtcactttgatttggaccaaaccgtttcttcagtatgaa
acctactacatcacctttaccagcctgaaggagagcagtgaacagataaccgtgcaggtg
gacggaagcctgaccaccttcacccagacgggcctggcagtcggtcagggctacagcgtc
aagatcgtcggagagatcgaaggaaggaagggagctgagagcacaactgaatttacaacc
ctcatctctgctccaaccaacctccacgtggtcaagacaacctcctcatcagcagttgtt
caatgggaggcatcacagggagaggttgacaggtatcgtctgactttcttacccagtgat
ggagcagggacgagtcaagaaatgatcatttcagctggccaaacctctgcccatattcat
cagctggaggcaggacgtttatacaaaatcttcctggtggcggagaagggactgatccgt
agccagccagtgagcacccaagtagttcctggcagtactttatcaagagttaccacagag
gatttgaacacgcaggtcacacaagcaccaggacacgacgttggcagcaaggaccaaaaa
ctgaatctatcacctggggggcaagtagttgaccagcagggtgtgagaaatcgtgactct
gcaaatgttgaagattcctcagcgggtattattgccaaaaccaaaccactcatggcaaga
aatggtaccggaccgagagttgtgggaaggcctgtattgtcaaagtcaaaggttccaggc
ttttttcgtttcaatgccaccagtggtagaagaagattggtccctggctcgatacataaa
aagccagtggtggcagaaaaaggcaaagtgatggaaatcaataaccctcagccagatgtc
ctcaccattagggactctgggaaagaccagagtgaagaggcatcaagctctgagaagagt
gagcacataaggccagctgtgatgcctgggagtgattctgaaacaaacagacaaagaagc
tcagaggaaccaacttctgctattggctcaaagaggcaaccagatgttggcattgctatt
cctgggaatgacactgatttggtgtctttaaacacaactgggactattcaaagccaagaa
aaaaaatgtctgaataaaattaaagtaacacacttcagattacccctaaaggacagaagc
aatacgtacagagggaatgggacagggctgcaaggaaacacattaggatcaaattcgaat
gaaacaccccctcataaagaggcagaccttgactacactcaagattctttgcaaaaactc
ataagaaacacttataacaatttaaatatcacaacaatttcagttcacctgttcaaacct
ttgaacctctcaactgatgcagacattgtgaggacacagattttaaagggagtggagcaa
ttttctggattatcctcagagttatcatcatcagatgacgatgctgcagaaccaccatct
tcactaaaatatttgatttcatcatcaccctcaccattagtaccacattcctcatcatca
ccatcctcacttcctctgttatctccttcatcatcatcctccagctcaaatgaatttgat
tcacatgacagcactgaacttaactcttccactgactcaccgttgactgaggatagaaaa
ctatcacgttcagacaaacacacaaggcccctttttctccaaacccttccaaaacgtgga
tccatacgtcgtgtatacccaaactttgaattgcttcgaaacaaaactaatcaaaatttg
agaattcctgaccaccctccttctcatttgagccacaccccaaaacaagaagcagaagta
aatttacctatgaaggatgtgagcagtgataaagatgcaaaaactacacttgtatcctct
ggggttgaacatggccaaacaaatagagcaagaggaaaaatccctgttcgtcgtccctat
ctaaaggggagttatccacgtcgactgttttcaaatgttcgaaatcaaactcgttctaat
ctgaggtatttcactcagccctccaaaccttcaaattctaattttactcagccctcccaa
ccttcaaatcctaaaagggatacacagaaagagcatttgtttcccactgaattaccagct
acatcaccttctgtttctggtgctgggccagtaagtggaggaaatgaaggaaaagtgggg
acaagactctacactgcaagctcatctactgagttagatcagaccacaataagaaggggt
gtgcctttttttcgtcgcccaaatttccgtcgaccactactacgtggtaaatctttccaa
aacgaaacatttacaaacttgagacaacatcagtatccatacagaggttttgtgcgtaag
cctttcctaactagaaagcaaaatgttggcaactttactgctggaagtcaaacaaatcaa
ctgggaaaagtcaataaccctgaaaatcctgaaattcaatctcagcaccggaatgttcac
aggtctttccacagttccctaactaataagtccagagaagaagaaaacgtccatttaagt
caaattgcccttacagatggccacgaacctactgccagcaaagagacaaaagagtcagaa
aagggtggaaatgctctgattgaattggaagcaatcacagattctgccaaccataaagtg
agattaaatgctggcagaaatattggtgctgcaaacctaggtagcccatccattaaaaac
acttttagaccactaagaccagtcacagttctaaatagacaatccctatcaagaactata
atggcaaagcatcacgacacccatagtaacagtgatactcaaaacaaagagcacctaaaa
gcaaatcaaactgcaaaaagcatctatgattctgaacagacagctgacatagaatcagat
gtttcttcctctgacgtcacaagagaacctctggactttgttggagtgactaaccggaca
tcttctggatacacactggtttgggattcaccagaaggaaaatataaaaactttcttgta
agcagaacagaagttaaacaagatgaagggctacaacagaaggaaagtacacaaaaagaa
gataaggatcaaaatatcaaagattctgtatcagaaaatggaggtcataaagatgacaac
agggtacctgaaagttttggccctcaagtcccaaatacccaggatggcacagtagccaaa
tcaacaggcagcaataaagtcttcaaaaaagtgcttcctggttcagctcgctccctgcag
tttgaacatctgcctccacagacggagtataccttgactttgctaggagggggtcctggc
ctactatccagactgcacaagcttgtcatcagcacaggcccagaacctccgtctaacatt
gtcttcagcaaagtgacagaaaactctctgacggtgtcatggaccaaaccaaggagttct
gttagtggtttcaaagtcacatacactcagtccgatgatgaagagccggtatcggtgtca
gtggattctgaggactccaccgtaaacttgtctcagctctctcctggattgtcctacgag
gttacaatcatctccaccctcggactcgacgagagcgatccagtcaaagactttgtcacg
actctccctgaccctcccagtgacttgcaagccttgaatgtcactgataccacagcgttg
ttattatggcgcccagcgctggctgctgttgataagtacgccatcgtgtatggctcagag
tcaggctcagggctgaggatcactgtttctggaaacacagctgagcagcggctcagcggt
ctggaggaatccaccacctacaccgtcaccatcaccagccagctgggcggccaggagagt
tcctccgccacgaccagcttcaccaccagcagcagttctgcaggggattttgatgaagct
agagacctccaagccaagaacgtgacccctcgcactgctgatgtgtcatggacaccccca
ataaagcctgtggatagatacatattgagctatcagaccgaaggtgaaaaatccgaggaa
atcattgttggccctaatgaaacccagtacaagctgaccagacttcatcctggctccctg
tatgatgtgaacctacggagcttgaggggagcacagctgtcagccaacactttcactaaa
ttcaccaccggaaagctgcagttccccttccccaccgactgctcccaggagctgctgaac
ggcgtcctcacttcagacacgatggagatcttccctcatgggaagctcggaaaatcgatg
atggtttactgtgacatggagacggatggcggcggctggacggtcttccagaggaggaag
gacggatcggaggatttctaccgaaattttaatgattatgttgaaggatttggaaatctg
aatggagagttctggctgggcctagagaagctccacaacttgactacaatgaccaggatg
aatcttcgtgttgacctacgagatgaaggcgagcaggtgttcgctcagtattcaaccttt
caggtggccaagagaaactacaagctgactgtgggcggatacagcggcactgcgggcgat
tctctcacgtaccacaacgactgcgccttcaccgccaaagaccgcagcccgcttttggga
ttgttccgctgcgccatctcttatcaaggaggctggtggtacaacaactgtcacgaagca
aacctgaacggcctctacggaaacaactacaaacaccagggtgtgatctggaagtcctgg
aaaggagaacatcactccatccagttcaccgagatgaagctgagaccagcaaacttcagg
acgccttccagaggactataa
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integrated database retrieval system
