Kryptolebias marmoratus (mangrove rivulus): 108246382
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Entry
108246382 CDS
T05608
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X2
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108246382
Membrane trafficking [BR:
kmr04131
]
Protein recycling
Others
Others
108246382
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
APC1_3rd
Motif
Other DBs
NCBI-GeneID:
108246382
NCBI-ProteinID:
XP_017289384
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Position
LG3:28766092..28923471
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AA seq
1221 aa
AA seq
DB search
MQRELSFCPKWLRTLWVLFLIMSCLFPAAEAEITCRSCQPGNKWRARELLLRFDTSGPGT
GLHGQVLGDGDRTGSTETPRLPCAPQSAARASDRPESARMKRSTDLLRAPGGHHEDQLGK
IKVSRDKLRDALTSLRARRSSPSDGEQNPSPAEAAGRRAARSELRWSGEERRAAGPRHEE
PKVNSSTFALTGDSSHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWRSTDYGATY
QKLNDKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYRLNFYILSL
LFHPEQEDWILAYSHNQKLYSSVEFGRRWQLVHERVAPNRFYWSKMGLDKEPGLIHLETS
ISEGQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQDEYVFVQVSTAGRPVYYVSAKRD
VFTPMKLPKYTLPKELHVISTDENRVVAAVQEWNQNETYNLYVSDTSGVFYTLALENVVS
SMGLEGNVMVDLYEVAGIKGMFLANKKTDYQVKTYITYNRGRDWRLLQAPSKDLRGSSIH
CVLPYCSLHLHLHVSANPYTSGNIASRESAPGIIVASGSIGSELTTNNVSVFITSDAGNA
WRQIFDEEYAVLYLDQGGALVAIRHTPLPIQHLWLSFDKGRQWNKYSFTNTPLFVDGVLG
EPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRI
YRKLKPTSRCVMGKTYSVTMTSGSCDCTEADFECDYGYERRTDGKCSPAFWFHPSSVSRS
CTTGMTFLNSTGYRKVVSNNCTAGVIAEYTARRQQCPAQAPRGLHLVTSEGTLTATLGAN
VTFLIFLEEGDGVKTSITVDFGDGHALTYSNVSSMEDGIKHIYKTVGIYRVLATAENSLG
SETATLYLHVTCQLEHIHLSAPFVAVKNKEVNLTAVLWPSQVGTVTYIWWIGNNTEPLIT
LEGSVACTFSREGINTITVQVSAGNSILQDRKTVAVHEYFQSHLLAFSSNLDEHNPDVPE
WRLDVSRVIRNSLIQATGVTEDQLLVTVLPGLPTAAEFFLLPDKQTPEGKPEKSSAHLDQ
LSEVLLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLLSVVVAGLA
VFVIYKFKRKIPGLNVYAQMQNEKEQEMMSPADPTKATPSSQQDLVPSLEILDTEFNSRP
IGCMKPHVHVKFSTELPTYIA
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgcagagggagctcagcttctgcccgaagtggctccgtacgctttgggttcttttcctc
atcatgtcctgcttgtttcccgccgccgaggctgagataacttgcaggtcttgccagcct
ggaaataagtggcgcgcacgggaattactgctcagattcgacacgagcgggcccgggacg
gggctgcacggacaagttttgggggacggagaccggacagggagcaccgagactccgcgg
ctcccctgcgcgcctcagtccgctgcacgcgcttcggatcggccggagtctgcccggatg
aaacggagtacagacctcctgcgcgcgccaggtggacaccatgaggaccagcttggcaaa
ataaaagtttctcgtgacaagctcagggatgctctgacatctctgcgcgccaggaggagc
agccccagcgacggagagcagaatccgagcccggcagaggcggcggggcgcagggccgcg
cgctccgagctgcgctggagcggagaggagcgcagagccgcgggtccgaggcacgaggag
cccaaagtcaacagctccacgttcgccctgaccggagactcgtcccacaaccaggccatg
gtgcactggtccggacagaacagcagcgtcattctgatgctgaccaaactcttcgacttc
aacctgaacagtgtgactgagagttcattatggaggtcaactgactacggagcaacgtac
cagaagctgaatgacaaagtgggagcgaagacgatcctcagttatttgtacgtgagcccc
aacaacaagagaaagatcatgctgctgactgatccggaggtagagagcagccttctgatc
agctctgacgaaggagccacgtaccagaagtacagactgaatttctacatcctcagcctg
cttttccaccccgaacaagaggactggatcctcgcgtacagccacaaccagaagctttac
agctcggtggagttcggcagaagatggcagctggtgcatgaaagagtggctcctaatcgt
ttctactggtcgaaaatgggtttggacaaagagccgggcctaattcacctggaaaccagc
atctctgaaggacaggcactgtatgtcacctgcaagctacagaactgcacagatgctaac
aagggcaaaccattccccggatacattgaccccaattctctggtggtgcaagatgagtat
gtgtttgtccaggtgtccactgctgggaggccagtctactatgtttctgcaaaaagagat
gtcttcacccctatgaagctgccaaaatacaccctgcctaaggagctgcatgtgatcagc
acagatgagaaccgtgtggtggcggccgttcaggagtggaaccagaacgagacctacaac
ctgtacgtgtccgacacctcgggggttttctacactctggccctggagaacgtggtcagc
agcatgggcctggaggggaacgtgatggttgacctctacgaggtagcaggaataaaaggg
atgttcctcgccaacaaaaagacagattaccaagtaaagacatacattacctacaacaga
ggcagagactggaggcttctacaggccccgagcaaagacctgaggggcagcagcattcac
tgtgtgctgccgtactgctcattacatctccatctccacgtgtctgcaaatccctacaca
tctggaaacatcgccagcagggagtcggcgccggggatcattgtcgcttcaggctccatc
ggctcagagctgaccaccaataacgtcagtgtgttcatcacttcagacgcagggaatgca
tggagacagatttttgatgaggagtatgctgtgctttatctcgaccaaggtggagccttg
gtggcaataagacacactccgcttcccatccaacacctgtggttgagctttgacaaagga
cggcagtggaacaagtacagcttcaccaacacgcctctgtttgtggacggtgtcctggga
gagcctggggaggagactctcatcatgacgatcttcggtcacgtcagtcatcgctccgag
tggcagctggtgaagatagacttcaggtccatcttcaacaggaggtgcacggaggcagac
taccagacgtggcatctacacaaccagggtgagccgtgtctcatgggagtgaaacggatc
taccggaagctgaagcccacgtccaggtgtgtgatggggaagacgtactcggtgacgatg
acgtcgggctcctgcgactgcaccgaggccgactttgagtgtgattacggctacgagaga
cggacggacggcaagtgcagccccgccttctggttccacccatcgtccgtgtccaggagc
tgcaccacaggaatgactttcctcaacagcacgggatacaggaaggtggtgtctaataac
tgcacagccggagtgatcgccgagtacacggccaggcggcagcagtgcccggcccaggct
cccagaggtctccacctggtcaccagcgagggcacgctgaccgccacgctgggcgccaac
gtcaccttcctcattttcctggaggagggcgatggcgtgaagacgagcatcaccgtggac
ttcggagacggccacgcgctcacctactccaacgtcagctccatggaggacggcattaaa
cacatctacaagaccgtgggaatctaccgggtgctggccacggcggagaacagcctgggc
tcggagaccgccaccctctacctgcacgtgacatgtcagctggagcacatccatctctcc
gctccctttgtggcggtgaagaacaaggaagtgaacctgactgctgttctgtggccgagc
caagtgggaacggtcacctacatctggtggatcggaaataatacagagcctttaatcacc
ctggagggaagcgtggcgtgcacgttctccagggaaggcatcaataccatcaccgtgcag
gtgtctgctgggaattccatcctgcaggacaggaaaaccgtcgctgtccacgaatacttc
cagtctcatctgctggccttttcatcgaacctggacgagcacaaccccgacgttccagaa
tggaggctggatgtgagccgggtcatcaggaactctctgatccaggctacaggtgtgaca
gaggaccagcttctggtcactgtcctcccaggtttacccaccgcagctgaattcttcctc
cttcctgacaagcagacacctgaggggaaaccagagaagagctcggctcatttagatcag
ctctcggaggttttgctgagcgccttgaatcaaaaccttgtccagttcacgttgcggccc
ggagtccaagtcaccgtgtacgcagctcacctgtctgcagcgcctctcgtggacaccagt
gagaaccacagcggctctgccatgctgatgctgctatcagtagtggttgcgggtttagct
gtgtttgtcatctacaaattcaagaggaagatcccaggcctcaacgtctatgcgcagatg
cagaacgaaaaagaacaagaaatgatgagtccagctgatccaacaaaggccacgcccagc
tcacagcaggacttggtgccttctttggagatcctggacaccgagttcaactcacggccc
atcggatgtatgaaacctcatgtacatgtgaaattctccacagaacttcccacatacatc
gcctga
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