Kryptolebias marmoratus (mangrove rivulus): 108246394
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Entry
108246394 CDS
T05608
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108246394
03036 Chromosome and associated proteins [BR:
kmr03036
]
108246394
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108246394
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
108246394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZNF142_18
zf-C2H2_7th_ZNF462
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
108246394
NCBI-ProteinID:
XP_017289400
UniProt:
A0A3Q3FE94
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All DBs
Position
LG11:complement(1397210..1426935)
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AA seq
840 aa
AA seq
DB search
MNGGSADGLGVVDVPTKDFPTIQAVHSQDHTVVDLLQQAAEAEGVVQRQAGVVLEQGPVE
GMVTVTQSQQELMEAGVGVGVDVGAGVEMMVVDSLDTTLMQVKTEVMDAAVGGSTAAVGL
VGEVAGAAHQAAMTTMDQTQIITLQVVNLKEQAALGLGELQLVQVPVSATTVEALQQGTF
VETTTMPKEGDPVICHTLPLPEGFQVVKVGANGEVETVEQEKEAEAHAEEEGELVGNQLL
EEDVDEPVQSLNDDSNWCKDPDYQPPSGVVKKTKKGKKSRLRYTEGDKDMDVSVYDFEEE
QQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDE
RPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPF
KCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYI
CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRY
CDAVFHERYALIQHQKSHKNEKRFRCDMCDYCCRQERHMVMHRRTHTGEKPYACSQCEKT
FRQKQLLDMHFKRYHDPNFVPTAFVCPKCNKTFTRRNTMARHSENCSGEVEDAENGGSSP
KKGRRGRKRKMRSRRDEDDSEEDQPELEEDDEAEGDEEAALLQEEDEPESMELDQAPAAI
PVPAPDEPPAKRKRGRPPKNSLKPPTPSKPVKMAAKTPAAAAAIIQVEDESTGVVEDIIL
KKEGGDAPAGGVTLTVEGEVTCDVGVETVETVELSVSEEATAAAANGDLTPEMILSMMDR
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgggtcagctgatggtttaggagtggtggatgtccccactaaagacttccca
accattcaggctgttcacagccaggatcacactgtggtggatctccttcagcaagctgcg
gaggctgagggtgtagtgcagagacaagctggagtcgtactggaacaaggtcctgtggaa
ggaatggttactgttacccagtctcagcaggaactgatggaagctggggtgggagtcggt
gtagacgttggagcaggagttgaaatgatggttgtggactctctggatacaaccctgatg
caggtgaagactgaggtaatggatgctgcagtaggtgggtcaacagctgcagtgggcttg
gttggagaggttgcaggtgctgctcatcaagctgctatgacaacaatggaccagactcag
atcattaccttacaggtggtaaatctaaaagagcaggcagccttgggcctgggggagctc
cagctggtccaggtgcccgtttctgccactactgtcgaggctttgcagcaaggcacattt
gtagagaccaccacaatgccaaaggaaggagacccagtcatctgtcacacattgcctctc
cccgagggctttcaggttgttaaggttggtgctaatggcgaggtggaaacagtagagcag
gaaaaggaagcagaagcccatgctgaagaagagggggagcttgtgggaaaccagctgctg
gaagaagacgtggacgagcctgttcagtctctaaatgatgactcaaactggtgcaaagac
ccagactatcaacccccttcaggagtagtcaaaaagaccaagaagggtaaaaagagccgt
ctgcgttataccgaaggtgacaaggatatggatgtcagtgtctatgactttgaagaggaa
cagcaggagggtcttttgtcggaggttaatgcagagaaagtagttggtaacatgaagcca
ccgaagcctaccaagatcaagaagaaaggagtaaagaagacgtttcagtgtgagctctgc
agctacacgtgtcctcggcgctccaacctggacaggcacatgaagagccacactgacgag
agacctcacaagtgtcacttgtgtggaagagccttcaggacagtgactctccttcgaaat
catctcaacacacatacaggaactcgaccacacaaatgcacagactgtgatatggctttt
gtgaccagtggagagcttgttcgtcatcgtcgctacaaacacacacatgagaaacccttc
aaatgctccatgtgtgactatgccagtgtggaggtgagcaaactgaaacgtcacattcgg
tcccacactggtgaacgtccattccagtgtagtctttgcagctacgccagcagagacaca
tacaagctgaagagacacatgaggacacactcaggagaaaaaccttatgagtgctacatc
tgccacgcccgattcacccagagtggaaccatgaaaatgcacattctgcagaaacacaca
gaaaatgtggccaaattccactgtccacactgtgacacagtgatcgcacgcaagagtgac
ttgggcgtgcatctccgtaagcagcactcattcattgagactggaaagaagtgtcgttat
tgcgatgccgtttttcatgagcggtacgctctgatccaacatcaaaagtcccataagaat
gagaagaggttcaggtgtgacatgtgtgactactgctgccgccaggagcgccacatggta
atgcatcgccgcacccacactggagagaaaccgtacgcatgcagccagtgtgaaaagacc
ttcagacagaagcagctcctggacatgcacttcaagcgctaccatgaccccaactttgtc
cccactgcttttgtttgccccaagtgtaacaagaccttcacacgcagaaacaccatggct
cgccactctgaaaactgtagtggtgaagtggaggatgcagaaaacggaggttcgagccca
aagaaagggaggcgaggaaggaagaggaagatgagaagcaggagagatgaggatgacagt
gaggaggatcagcctgaactagaagaggacgatgaagctgagggtgacgaagaagctgca
ctgctacaggaagaggacgaaccagaaagcatggaattggatcaagcccctgctgccatc
ccagtaccagcccctgatgagccaccagccaagaggaaacgaggccgacccccaaagaac
agcctcaagcctccaactcccagcaagccagtaaaaatggctgccaaaacacctgctgct
gctgctgccatcattcaggtggaggacgagagcactggggtggtggaggacatcatcctg
aagaaggaggggggcgatgccccagcagggggagtgaccctgactgtggagggggaggtg
acatgtgatgttggggtggagactgtggagactgtggagctttctgtgagcgaggaagcg
acagcagctgctgccaacggagatttgacaccagagatgattctgagtatgatggaccgg
tga
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