Kryptolebias marmoratus (mangrove rivulus): 108246500
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Entry
108246500 CDS
T05608
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108246500 (rp1l1a)
04812 Cytoskeleton proteins [BR:
kmr04812
]
108246500 (rp1l1a)
Cilium and associated proteins [BR:
kmr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
108246500 (rp1l1a)
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
108246500 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
108246500
NCBI-ProteinID:
XP_017289570
UniProt:
A0A3Q3FYY3
LinkDB
All DBs
Position
LG23:complement(898136..916849)
Genome browser
AA seq
2390 aa
AA seq
DB search
MHSVQAGLWDPRPPSKHATAPPANSRDSHVTSAIPAKRITFYRSGDSQFGGVRMAIHKRS
FKCFDALLDDLSQKVPLPFGVRTVTTPRGTHSIKHLEQLQDGGCYLCSDRRQAKPINMEL
AGKRQGTWYHHSRRPQRPESSSVTPPGHSHLPYRQRRILLVKNSEPGVRRSVVLSRRSTR
SLKAFLDEVSEVMQFHVRKLYTAEGRKIDSVQSLMTCPAVVVCVGRETFSPMLINFIRKT
SEEKLPGLGSKSPGLGPRVPGNGARSPAAQGVSSPPHGAQSRSSEYDEGLESKKNNNFGL
ETKKSIIHPRSDSSNRSTRFSVSSEKSFGVGFPARPSIMNDDIEKRVLVNKDGSVSVEMR
VRFRLQNDEAVQWSTQIKKSPSLINDCCALSQTQPHYLQQSPSESCSDPDSTSYEGVDYS
SQPLKCALAGNYCPCCQQRQYNQFDMWENTTNKHHPVPPAHASNHATMRHTRSSSSSSSC
NSRRVVRCQARLSGSPGGSGSEQSQFVQKEMSVTEQVEHRVEVDQDGDTQVEVCKIRQCC
SRTEVVAMDTDLLPPSRKAVEGELMMGQDENRPLSAVSSSSHVLQSLKEDEDDDEDDLPP
SASQCSNRNEPSPSPTPAAHVDEEPTSNIPANSVHSVKHEGHKENDKTESRTLSAASSCR
CGSATPHSAAEADEPDRVPTSRSNISQHRLEEEGAIDTAVEDINRAASGLSSHTGCLASS
QKSRTPDVCPNCGGWKHAINSPHPTLLLSNKENGNSCCDDVASDALAVPAQSQKASPTNN
GPIAAVPNDLEGRAPSPTSTTSNPNSKGKDDRRAPSTTSATSHRSKKSNCNGSSGATAEK
DKERSSTTMSAQSNLSKRTTEAVVIDSRQNGEEENTAERTVRSSVSPSLKMADNAEESQS
KSTENESQSRPESIASINLKNDKRAASPRSGKSAKSPHTNTEADRSPSATSGRSHTSAKS
SKSHGSNRTKKSLHPHDADVKTTETNGDEMGNRTDLESAMSVKSKTSAKSGASHKSNSSR
SRSSPNVAIIKTPDDPDEEENGTKEQELSVASEKSSVASDLLRNSNHNKMANIAVIETVE
AGENVDNSAPRCTSAEGSHGQTLSPRRRPSSRTHSPKAASPKHSPSQQLLPNPDGGELRV
HSQNSSESDRSRCCCEAGSAIENENKEKGEDKEDETYDKASSILSPSSKRQRKESGGTEI
PLSRNSSGSISLGLPEDHETADSDSGKSGVSFHSHTECKITGRVKTATPGVSKSPAHPLA
VDIPTIKTPKEGEDGNEEETTEKAASASTVERSRSRKSCGNCSVKAAAQTLDGNSEEKSL
SASPTKNPNVEETESVKSTSTTDASRMDILSKRTSSAISGNASVRKKSPSGAGVKKVTKE
TAGILANTDTENQDASRPTSETNEEEEITQIKTRSIWSQSPLSLRPESTASARSGSGKAS
KQRKVTHDSVKSGHKTKSQTGSEGGSIRVPDSRKETSIKSSSPCPLDNPRPSSKTEVGSE
SSLSAGDLLKETTPGTCRHSQHSKSSKTSDKPRSGKSKSSQKSRKLTDQEDVVGLTPECL
PNKSPSEFVSDWLRSIPANGSMLTLDNELNEEEEEDWRPEQTVETPGEETGTTEVSPDEE
QEDNDKNVKTQEEDKEHKADCDAEGPTLGESVETSPSSKNWQSSAAVMKVLLSSSLGRCR
SMPEVSPVYGRRLSTSARGLLDSLAQLQLIEPVVGCDSHQQKERKQKYDEIMTILQSLWL
TEPRDIEASETKDNRASKQVTPPSSSSGVGMSSGSDGSGKGNGNQGEDETRAKEEGAVEK
VIKNEDGNGKARDKDTEMEHEETFKADTSEKSEDQSTVPQSLESPKTMENTSSSEKNSAN
DSFKFPTDHERQTQEGSHAGTPRAPLSKRPSQDPDPVWVLHLLKKLEKQFMSHYIQAMTE
FKVRWDLDDSLLLDTMISELRDEVSQRIQSSIQREMRKIQGRAGKAGKSPRPPQLASISR
DSTMTEKRRRIMKVIKNQSVKTADSVSDDEMTGSDQRSDDEYCPCDACVRKKMASRPLRK
NPPAAECPVMMEFDLRKILQLKKSPAPETVAAPRAAEEDGERSPADEEGKTLEMVEEEEE
DEETKEDIKADVVLEETIPEENEEVEQRGGSVEDSVEDEEQDEGETSEQDETSENGEEEE
EEEGRCTCQSNKDEEESSREEETSNCTDDEGETGEDETGEEEEEEEESDKETMKEATAGK
EKNEPGGDEANDESALAEDAEEGNVSAEDEDDDDEEEESEVENEEASEEERASPQSQGET
PAVTEGEEADVEDSDDSKPDTSAEGSGRGESGGSGEDEEQGSEGNEEEDAVEEFKLEEDS
EDAKDGDGPLPHQFTTTSVESQPGSMEGSDAGSPSNPADSTGRRSKPKKA
NT seq
7173 nt
NT seq
+upstream
nt +downstream
nt
atgcattcggtccaggcggggctgtgggacccccggcccccgtctaaacatgccacggcc
cctcccgccaactcgcgcgactcccacgtgacctcggccatcccggccaagcggatcact
ttctacagaagcggcgacagccagtttgggggcgtccggatggccatccacaagcgcagc
tttaaatgcttcgacgccctgctggacgacctttctcaaaaggtgcccctgccgttcgga
gtgcggaccgtgaccaccccccgaggcacacacagcatcaaacacctggagcagctccaa
gacggtggctgctacctctgctctgaccggcgtcaagctaagcccattaacatggagctg
gccggcaaacgccaaggcacctggtaccatcacagccggaggccccagcggcctgaaagc
tcctctgtgacacccccgggccattcgcatttgccttacaggcagcgacggatcctgctg
gtgaagaacagcgagccgggcgtcaggaggagcgtcgtgctgagcaggagatcaacgaga
agcctgaaagcttttctcgacgaggtgtcagaggtgatgcagtttcatgtccgcaagctc
tacactgcagagggacgcaagatcgacagcgtgcagagcctgatgacttgtcctgctgtg
gtggtgtgcgtcggccgggaaaccttcagccccatgctcatcaacttcatcaggaagacc
tcggaagaaaaactacctggtctgggtagcaagtctcctggtcttgggcctcgggttcct
ggtaacggggcccgatctcctgctgcccaaggagtgagttctcctcctcatggagctcag
tccagatccagtgagtacgacgaaggccttgaaagcaagaaaaataataattttggtttg
gagaccaagaagagcatcatccatcctcgctctgattcctcgaatcgctccactcgcttc
tctgtgtcttcggaaaagtcctttggtgtcggctttccggcgaggccgtccattatgaat
gatgacatcgaaaagcgtgttctagtcaataaagacgggagcgtttcggtagagatgagg
gtgcgttttcgccttcaaaatgacgaggccgtacagtggtccacacaaattaagaaatcc
ccctccctgatcaatgattgttgtgccctgagccaaacccagccgcattacctgcagcag
agtccgtcagaaagctgttcagatcctgattccacctcatatgagggtgtggattactcc
agccaacctttgaaatgtgcactggcagggaactactgtccctgttgccagcagagacaa
tataatcagtttgacatgtgggaaaacacaacaaacaagcaccatcctgttccacccgca
catgcatccaaccatgctacgatgagacatacacgctcctcaagctcgtcttcgtcgtgc
aattcaagaagggtggttcggtgtcaagcgcggctttccgggtctccgggtggctcgggt
tcagaacagagccagttcgtccagaaagagatgtctgtgacggagcaggtggagcacaga
gtagaagtggaccaagatggggacactcaggtcgaggtctgcaaaattcgccaatgctgc
agtaggaccgaagtggtcgccatggatactgaccttctgccaccgagcagaaaggccgtt
gagggcgagctaatgatggggcaagacgaaaaccgccccttgtctgcagtcagcagctcc
tcccatgttcttcagtcactgaaagaggatgaagacgatgacgaagacgatctcccaccc
agcgcttctcagtgctccaacagaaacgaaccgtccccatcgccaacccccgcggctcac
gtggatgaagagccaacaagcaacatcccagcaaattccgtccactctgtcaaacacgag
ggccacaaggaaaatgacaagacagaaagcaggacattgtctgcagcgtcttcatgccgg
tgtggatcagcaaccccacactcagcagctgaagcagatgagcctgatcgagtgcccacc
tccaggtctaatatcagtcaacacagattagaggaagaaggggcaattgacactgcggtt
gaagacataaacagggctgctagtggcttatcctctcacacaggatgcttggcaagctct
cagaagtcaaggacacccgatgtgtgcccaaattgtggaggttggaaacatgcgatcaac
tctccacaccccactttacttctctccaacaaggagaatggcaacagttgctgtgatgat
gtggcttcagacgctttggctgtgccagcacagtcacaaaaggccagccccaccaacaac
gggcccatcgctgctgtaccgaacgacttggaagggagagcacctagtcccacgtctaca
acttccaatccaaactcaaaaggaaaagatgacaggagggctccaagtaccacttcagct
acaagccacaggtcaaagaagtctaattgcaatggtagctctggtgctacagctgaaaaa
gacaaggagagaagctccactacgatgtcagctcagtccaacctgtccaaacgcacaact
gaagctgttgtcatcgattcaagacagaacggggaggaagaaaacactgcagaaagaaca
gtcaggtcaagtgtttctccaagcttaaaaatggcagacaatgctgaagaaagtcaaagc
aaaagtacagaaaatgaatcacaatcaaggccagaaagcatagcctcgattaatttaaaa
aatgacaaaagggcagccagtccaaggtctggtaaatctgcaaagtctcctcatacaaac
acagaagcggacagatccccaagcgccacatcagggagatcgcacacttctgccaagtcc
tccaagtcccacgggtcgaaccgcacaaagaaatctctacatccgcatgacgctgatgtt
aagacgactgagacaaatggggacgagatgggaaacagaacagacctggaaagtgccatg
tctgtgaagtcaaaaacttcagcaaagtctggtgcttcgcacaagtcaaactcaagcagg
agtcgctcgagtccaaatgttgccatcattaaaacaccagacgatcctgatgaggaggaa
aatggcacaaaagaacaagagctgagcgttgcttcagaaaaatccagtgttgcatctgat
ttattacgcaattcgaatcataacaaaatggccaatattgctgttattgaaacagtggaa
gcaggggaaaatgtggacaatagcgcaccacgatgtacatctgctgaaggctctcacggc
caaacactctcacccagaagaagaccttcatcccgaacccattcacccaaagctgcctcc
cctaaacattctccgtctcagcagttgttaccaaatcccgatggtggagaactaagagtt
cactcccaaaactcaagcgaatctgacagatccagatgttgctgtgaagcaggatcagca
atcgaaaatgaaaataaagaaaaaggagaggacaaggaagacgaaacttacgataaggcc
tccagcatcttgtcaccttcatcaaaaagacaaaggaaagaatcaggaggcacggagata
cctctgagtcgtaactcatcgggatcaatctctcttgggctaccagaagaccatgaaaca
gctgattcagacagtggcaaatctggtgtttcttttcacagccacacagagtgtaagatt
acaggcagagtgaagacagcaactcctggtgtctccaagagcccagctcatcctctagca
gttgatatccctactatcaaaacacccaaagaaggcgaagatgggaatgaagaggaaacc
acagaaaaagcggcaagtgcaagtacagtcgaacgcagcaggtctcgtaaatcctgtggt
aactgcagcgtcaaagcggcagctcaaactcttgatggcaactctgaggaaaaaagtctc
agtgctagtcctaccaaaaatccaaacgtagaggaaacagaaagtgtgaaatctacgtca
acaacagatgctagcagaatggatatcctgagcaagaggacctcatctgccatctcagga
aatgcaagcgtccggaaaaaatccccttccggagccggtgttaaaaaagtcacaaaagaa
actgctggaattttggcaaatactgacaccgaaaaccaggatgctagtagaccaactagc
gaaactaatgaggaagaagaaatcacacaaataaagacacggagtatctggtcccaaagt
cccttgtccctcaggccggagtcgacggcttcagctcggtcagggtcgggaaaggcttca
aagcagcgtaaagtaactcatgattcagtcaaatcaggtcacaagaccaagtcccagaca
ggaagcgagggtggtagtatcagagtgcctgactccaggaaagaaacttccatcaagtcc
tcaagtccttgtcccttagacaaccccagaccaagcagtaaaactgaagtaggcagtgaa
agctccctgtctgctggtgatctgctcaaggaaactacacctgggacgtgccgccacagc
caacattcaaaatcaagtaaaaccagtgacaagcctcggagtgggaaaagtaagagctct
cagaaaagcaggaaactgacggatcaggaggatgtggtgggacttacacctgaatgttta
cccaacaagtcccccagtgagtttgttagcgactggctgcggagtatccctgcaaacggc
agcatgctcactcttgacaatgagttaaatgaggaagaagaagaagattggaggccagag
cagacggtggaaacgcccggggaggagacaggaacgacggaggtgagccctgacgaggag
caagaggacaacgataagaacgttaagacacaagaggaagacaaagagcacaaagctgac
tgtgatgctgaaggtccaacattaggagagtcagtggagacttctccttcctccaagaac
tggcaaagttctgcagcggtgatgaaagttctcttgagctcttctcttggacgatgccgg
agcatgcccgaggtatccccagtttatggccgtagattgagcacatcagccaggggcctt
ttggacagtttggcccagctgcaacttattgaacccgtagtgggctgcgacagtcatcaa
caaaaggagcgtaagcagaaatatgacgagattatgaccatccttcagtcactgtggctc
actgaaccaagggacattgaggccagtgagaccaaggacaacagagcctcaaagcaggtg
acaccaccaagttcctcatctggggtgggtatgagcagtgggtcagatggatcggggaaa
gggaatggaaaccaaggagaagatgaaacgcgtgctaaagaggaaggggcagtagaaaaa
gtgattaaaaacgaggatggaaatggaaaggctagagataaggacactgaaatggaacat
gaggagacatttaaagcagacacatcggagaagagtgaagaccaaagtacggttcctcaa
agtctagaaagtccaaagaccatggagaacacttcatcatcagagaagaactctgccaat
gacagcttcaaattccctacagatcacgaaaggcagacacaggaaggctctcacgcaggc
accccgcgagcacccttgtccaaaagaccttcccaggaccctgatccggtctgggtcctt
cacctcctgaagaagctggagaaacagttcatgagccactacattcaggccatgacagag
ttcaaggttcgctgggacctggacgacagcctcctcctggacaccatgatctctgagctg
agggacgaggtgagccagcgcatccagagcagcatccagcgcgagatgaggaagattcaa
ggtcgagccgggaaagcgggcaagtcgcctcggccgccgcagttagcaagcatctccagg
gactccaccatgacggagaagaggcgtcgtataatgaaggtgataaagaaccagtctgtt
aaaaccgcggactctgtgagtgacgacgagatgacgggaagcgatcagcgaagcgacgac
gagtactgcccctgtgacgcttgtgtccgcaagaaaatggcgtcccggcctctcagaaag
aacccgccggcggccgaatgccccgtcatgatggagttcgacctgcgcaagatcctgcaa
ctcaaaaaaagcccggcgcccgaaactgtggcggctccccgagctgcagaggaggatggc
gaaaggtcacctgccgacgaggaaggaaagactttggaaatggttgaggaagaagaggag
gacgaagaaaccaaggaggacatcaaagccgatgttgttttagaggagacgattccagag
gaaaacgaggaggttgaacagagaggggggagcgtggaagacagcgtggaagatgaggag
caggacgaaggagaaacgagtgagcaagacgagacgtctgaaaatggagaggaagaggag
gaggaggaaggcagatgcacttgtcagtccaataaagatgaagaggagagcagcagagaa
gaagaaacaagcaactgcacagatgatgaaggggagacaggggaagacgagacgggggaa
gaagaggaggaagaggaggagagcgacaaagaaacaatgaaggaggcgacagcgggcaag
gagaaaaacgaaccggggggtgacgaggcaaatgacgagtcggcgctggcggaggatgcg
gaggagggaaacgtcagcgcagaggatgaagatgacgatgacgaggaggaggagagtgag
gtggagaacgaagaggcatctgaggaggagagagcctccccgcagagccagggcgagact
ccagccgtgaccgaaggcgaagaggccgacgtcgaggactcagacgacagtaagcctgac
accagcgccgaaggatccgggcgcggggagtctggaggctcaggagaagacgaggagcag
ggcagcgaggggaacgaggaggaggacgccgtggaggagttcaagctggaggaggacagc
gaggacgctaaggacggggacgggcctctgccgcatcagttcaccacgacctcggtggag
tcccagcccggctcgatggaaggcagcgacgcgggttcgccgtcgaaccctgcggactct
acgggccgcaggagcaaacccaagaaggcttaa
DBGET
integrated database retrieval system
