Kryptolebias marmoratus (mangrove rivulus): 108246509
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Entry
108246509 CDS
T05608
Symbol
slco1c1
Name
(RefSeq) solute carrier organic anion transporter family member 1C1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
108246509 (slco1c1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108246509 (slco1c1)
Transporters [BR:
kmr02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
108246509 (slco1c1)
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GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
108246509
NCBI-ProteinID:
XP_017289588
UniProt:
A0A3Q3B3E4
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Position
LG2:14758475..14791409
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AA seq
702 aa
AA seq
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MEDRAEEDCVQENGCSDGKNSKPNNSPCTSLRMFLVALSFAYFAKALSGSYMKSTITQLE
RRFDIPSYLIGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIAMGCVLMSVGTFIIALPHF
IIGRYKFETSVRWVVNSSHNSSPCQGGSTVDLTQDNEPPQVPSTSCDGDSNLSMWIYVLL
GNVLRGIGETPVQPLGISYIDDFATEENAALYVGCVQTIAVVGPVFGYLLGALCAKIYVD
VGFVKMETITITPEDARWVGAWWLGYLIAGTITLLSAIPFWFLPRSLPTSGSQLPKRCTQ
EQTSFIKDSPHPKNKYQAEERTSFIEMAKDFIPTLRTLLGHPVYLIYLCVTVIQLNSLIG
MVTYKPKYIEQHFRQSASKANFLMGVINIPAVALGMFSGGMLMKRLKLNIMGAAKFAFGT
SLIGYILSLFFFAMSCENAKVAGVTLSYDSIDQLSYDKHSVFTACNSDCLCDSSKWDPVC
GGNGITYVSPCLAGCTTSTGSGKNTVFSNCSCVGVAGNYTASTGHCPEKDDCDRMFPYFL
ALSVITSFIISLGGTPGYMFLIRCIKPQLKSLALGFYALATQTLAGIPAPIYFGAIIDTT
CLKWGKKRCGGLGACRIYNTTAYRLAYLGLTLGLRTISFIICIPGFILLRRQLKEEEKRA
INEALSNGGTELEALRKDEFVILKSDQTVHTSDNGTDRHTRL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagagccgaggaagactgcgtgcaggagaatggatgcagcgacggcaagaac
agcaaacccaacaactctccctgcaccagcctgaggatgtttctggtagctctgtccttt
gcctattttgcaaaagctctgtcggggagctacatgaagagcacaataactcagttggag
cggcgctttgacatccccagttacctaataggagtcattgatgggagctttgagataggt
aacctgctggtgatagcttttgtcagttactttggggccaaactccacaggccgaagatc
atcgccatgggttgcgtactgatgtctgttggcaccttcatcatcgctctgcctcacttc
atcattgggcgctacaaatttgaaacatctgtgaggtgggtggtgaactcaagtcataac
tcatctccatgtcaggggggttcaacggtagacctgacacaagacaacgaaccacctcag
gtgccatccacaagttgtgatggtgactccaacttgtccatgtggatctacgtcctcctg
ggaaatgtcttgcgggggatcggcgagacccccgttcaacccctggggatctcttacatt
gatgattttgctactgaggagaatgctgcactgtatgttggctgtgtgcagaccatcgct
gtagtcggccctgtgtttggatacctcttaggcgccctttgtgctaaaatctacgtggac
gttggatttgtaaaaatggagaccatcaccataaccccggaagatgcccgctgggtcggg
gcctggtggctgggctacctcatcgctggaaccatcaccctgctctctgccatcccattc
tggtttctgccgcgctctctgcccacatccgggtcccagctcccaaaacgttgcactcag
gagcagaccagtttcatcaaagactctccgcatccaaaaaacaagtaccaagcagaggaa
cgtaccagttttattgagatggctaaagattttattccaaccctgcgaactctgctggga
cacccggtgtatctgatctacttgtgtgtgacggtcatccagctgaactctctcatcggc
atggtcacctacaagcccaagtacatcgagcagcatttcaggcagtctgcctcaaaggcg
aactttctgatgggtgtgatcaatatccccgctgtggcactggggatgttttctggtggt
atgctcatgaagaggctgaagctgaacatcatgggagcagccaagtttgcttttggcacg
tccctgattggttacatcctgtcgctgtttttcttcgcaatgagttgtgagaatgccaag
gtggccggggtgacgctgtcgtacgacagcatagaccaactgtcttacgataagcactca
gtcttcactgcctgcaactcggactgtttgtgcgactcgagtaagtgggaccctgtgtgt
ggggggaatggcatcacgtatgtttctccgtgtcttgccggctgcaccacttccacgggc
tcagggaaaaacacagtcttctccaactgtagctgtgtcggtgtggctgggaactacaca
gccagtacaggtcactgccctgaaaaggacgactgcgacaggatgttcccgtacttcctt
gccctctctgtcatcacttcctttatcatctcccttgggggcactccaggctacatgttt
ctcatcaggtgcatcaagccacagctgaaatctctggctctgggtttctatgctttggca
acgcagactcttgcagggatccctgcacccatctactttggggcaatcatcgacaccact
tgtctcaaatggggtaagaagagatgtggaggtttaggagcctgtagaatctacaacacc
actgcatacaggttagcatacctgggcctgactttaggcctgcggactatctcatttatc
atttgcattccgggcttcatcctgctcagacggcagctaaaggaggaagaaaaaagggcc
ataaacgaagctctgtctaatggtgggaccgaactggaggcgctcaggaaggatgagttt
gttatactgaagtccgatcaaacggtgcacacgtcagacaacggcacagatcggcacacc
cggctgtga
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