Kryptolebias marmoratus (mangrove rivulus): 108246519
Help
Entry
108246519 CDS
T05608
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108246519
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
108246519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_2
zf-CCCH
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
108246519
NCBI-ProteinID:
XP_017289601
UniProt:
A0A3Q3B5F6
LinkDB
All DBs
Position
LG19:22719295..22730510
Genome browser
AA seq
518 aa
AA seq
DB search
MDQQQHIKVERFLKLGYSHGDIVRVLESLHHDAQTNDILEELIKTCHTRAHGNTSVPTSP
QLVPRGCSPGPNRPRAGPEREHHADFRPVVIDGSNVAMSHGDKKVFSCHGLQLAVKWFWD
KGLRDITVFVPLWRKEQPRPEASITDQHILHELESRKILVYTPSRFVNGKRVVCYDDRYI
VRLAVDLDGIIVSNDNYRDLQTENSQWKKFIEERLLMYTFANDKFMPPDDPLGRNGPTID
DFLRKKPWTPDNRQQHCPYGKKCTYGLKCKFYHPERVNQSQLSVADELRALGDRAKNLSP
ATYPQEYRYTSSTPPPPSREEQSHRTSPSDPSICQRGQTNISNPYYPSSDGDEAFSSMES
SMSRLYIQDMPYSMEPPLTSYSSGLGSYLVSSSHGGSSLRVCQSGPAFFSHQSGSCECRC
GHQKIRMPANHHHPAWSSCPTVPPYNRDQPAHFTETQHFRPPANRHSLSRDQRNDLMSQL
STLYPKSMVEQVLIENPHTSDMLELTQLLQSYRTSMSY
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcagcagcacatcaaagtggaacggtttctcaaactgggctactctcacggt
gacattgtgagggtgctggagagcctccaccacgacgcccagaccaacgacattctggag
gagctgatcaaaacctgccacacccgcgcccacggcaacaccagcgtccccaccagcccc
cagctggtgccccgaggctgcagccccggccccaacaggcccagagccggacctgagcga
gagcatcacgccgacttcagacctgtggtgatagatggaagcaacgtggccatgagccat
ggcgacaagaaggtgttttcatgccatggcctccagctggcggtgaagtggttctgggac
aaagggctgcgtgacatcacggtgtttgttcccctgtggaggaaggagcagccgcggcct
gaagcatcaatcacagaccaacatattctccacgaactggagagtaggaagatcctggtg
tacacaccgtcccgctttgtcaacgggaaacgggtcgtgtgttatgatgaccggtacatc
gtcaggctggcggtggatctggacggtattattgtctccaatgacaactaccgtgaccta
cagacagagaattctcagtggaagaagttcatcgaggagaggctcctcatgtacacgttc
gccaatgacaagttcatgcctccagacgatcctcttggtagaaatggtcccactattgat
gactttctgaggaaaaagccgtggaccccagacaacaggcagcagcactgtccatacggg
aagaaatgtacctatggattaaagtgcaagttctaccatccagagagggtcaaccaatcg
cagctatccgtggctgatgaactgagggctctcggggacagagccaagaacctgtcacct
gccacatatcctcaggagtacagatacacctcgtccacgccgccgcctcccagcagagag
gagcagtcccacagaacctcacccagtgacccgtccatctgtcagagaggccaaaccaac
atcagtaacccttactacccgagctcagacggagatgaggcctttagctcaatggagagc
tccatgtcccggctctacatccaggacatgccctacagcatggagccccctctgaccagc
tacagcagcgggctgggcagctacctggtgtctagctcacacggtgggagcagcctgagg
gtctgtcagagcggaccagcctttttctcccatcagagcggctcctgtgagtgtaggtgt
ggccaccagaagatccggatgcctgccaaccaccaccacccggcgtggagctcctgcccc
actgtgcctccgtacaacagggaccagcccgctcatttcacagagacgcagcacttcaga
ccgcctgctaacagacacagcttgtcccgggaccagaggaacgatctgatgagccagctg
agcaccctatacccaaaaagcatggtggagcaggtcctgattgagaaccctcacacctca
gacatgttggaactgacccagctcctccagagctacagaaccagcatgtcctactag
DBGET
integrated database retrieval system
