Kryptolebias marmoratus (mangrove rivulus): 108246712
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Entry
108246712 CDS
T05608
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108246712 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108246712 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108246712 (taf2)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108246712 (taf2)
Peptidases and inhibitors [BR:
kmr01002
]
Metallo peptidases
Family M1
108246712 (taf2)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108246712 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
108246712 (taf2)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108246712 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
CCDC106
Motif
Other DBs
NCBI-GeneID:
108246712
NCBI-ProteinID:
XP_017289880
LinkDB
All DBs
Position
LG23:complement(4316194..4386015)
Genome browser
AA seq
1220 aa
AA seq
DB search
MNRKKDKAFESPRPFKLTHQVVCINNINFQRKSVIGFVELAIFPTVVNLNRIKLNSKQCR
IYRVRVNELEAPFLYNDPTLEVCHNESKQRNLNYFSSAYTAAVSAVDPDAGNGELVIKVP
SELWKQADELKVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLLETIYTHDMRKKTFHYVLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
AYVQVSSYASMSIFSTNLLHSPMIIDQTPETRRCLAQALAQQFFGCFISRMSWADEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDKIVEYELEMGGVLLHPTFSGVKEKDNSSLFS
PTPHLHFSIKHPHTLSWEYFKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQ
TYQTHMWSQMLLSTYAFLKSISNVSGKDIGPLIKQWVDQSSVVKFFGSFAFNRKRNVLEL
EIRQDYTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPL
MNGEEVDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEEAI
SALEKFPTPPSRLALTDVLEQEQCFYKVRMQACFCLAKIANAMVSTWQGPPAMKSLFTRM
FCCKSCPNIVKTNNFINFQSYFLQKTMPVAMALLRDVQNLCPKDVLHFLLDLIKYNDNRK
NKFSDNYYRADLIEALTNSLTPAITINNEVPTVDNLNTDVRLILEEITRFLNMEKLLPSF
RNTITVSCLKAIRQLQKNGHIPSDPLLFKSYAEYGHFVDIRTAALEALVDYTRVERCTTE
LQWLLNMVQNDPVHYVRHKILGMLCKNPPFTKTADSALCNEALVDQLWKLMNSGTSHDWR
LRCDAVNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPELGVSVVMDTPASIG
IHGVGMSYTSMDEEPDPISLGVCGVGQPPQGLKRKAETPLGSPPEPGQVLQQQDDDGRGG
RYKIRFNTMEDEDIDMETVHDSQAFIHHQLNLLERPSTPGKEPPLVEQTLLSIPTTPVPS
FSKETISSSTKHGGDHSHHHHHHHHEHKKKKKKHKHKHKHKHKHESKDKEKDRDKDRDNP
HVYSNSPASGRSLRSPSLSD
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaaggataaagccttcgagagcccacgtccctttaaattaacccaccag
gtggtgtgcatcaacaatatcaacttccaaaggaagtctgttattggctttgttgagctg
gccattttcccgacagtggtcaacctaaacaggatcaagctgaacagtaaacagtgccgc
atctacagggtccgggtcaatgaactggaagctccatttctttacaacgaccccacactg
gaggtgtgccacaatgagtcaaagcagaggaacctgaactacttctctagtgcctacaca
gcagcagtgagtgctgtggatcctgacgctggaaacggggagctggtcatcaaagttccc
tctgaactctggaaacaagcagacgagctgaaggtgctgaaggtgtacatagaattctct
ctggaccagcccaaagggggtctccactttgttgttcctgatgtggaaggcagcatggca
gagaggggagcccatgtgttttcctttggataccagaactccacaagattctggttcccc
tgtgtggactcgtactcagagctgtgcacctggaagctggagttcaccgtggatgcgtcc
atggtggcagtgtcctgtggagacctcctggagaccatctacacccatgacatgaggaag
aagacgttccactacgtgctgcccatccctaccgctgctcccaacatctccctggctgtg
gggccctttgagatcctagtagacccctacatgcacgaggtgacccatttctgcttgcct
cagctgcttcctctgctcaaacactccatgtcctacctgcatgagatttttgagttctac
gaggagatcctgacatgccgctatccgtactcctgttttaagactgtgtttgtcgacgag
gcctatgttcaggtgtcatcgtacgcttctatgagcatcttcagtaccaacctgctccac
agcccgatgatcatagaccagaccccagaaactcgacgctgtctagctcaagccttggct
cagcagttctttggctgtttcatctccaggatgtcatgggctgacgagtgggtgctgaag
gggatctctggctacatctacggcctctacctgaagaagacctttggagtcaatgagtac
cggcactggatcaaagaggaactggacaagattgttgagtatgagcttgaaatgggaggg
gtgttgttgcaccccactttcagtggagttaaagaaaaggacaactcttctcttttcagt
ccaaccccccaccttcacttctccatcaagcacccccacaccctgtcctgggagtacttc
aagatgtttcagtgtaaggcccacctggtgatgagactgatagaaaacagaatcagcatg
gagttcatgctgcaggtttttaacaaactcctgagcctggccagcacagcctcatctcag
acctatcagacccacatgtggagccagatgcttctgtccacttacgccttcctgaaatcc
atctccaatgtttctggcaaagacattggccccctcatcaaacaatgggtagaccagagt
agtgtggtaaaattctttggcagctttgccttcaacaggaaaaggaatgtgctagagctg
gagatccgtcaggactacacatcatctggaactcagaaatatgtgggccccatcaaggtg
acggtacaagaattggacgggtccttcaaccacacactgcagatcgaggagaacagcctt
aaacatgacatcccctgccactcaaagagcagaagaaacaagaagaagaagattcctctg
atgaatggtgaagaagtggatatggatttgtctgccatggacgctgactctcctctgctg
tggattcgaatcgacccagacatgtccattctgaggaaagtggagtttgagcaggcagac
ttcatgtggcagtaccagctgcgatatgagagggatgtggtggctcaggaggaagccatc
tcagcgcttgaaaaattccccactcctccctccagattggctctgactgacgtcctagag
caggaacagtgtttctacaaagttcgcatgcaagcctgcttctgcctggctaagatagcc
aatgccatggtgagcacatggcagggtccaccagccatgaagtctctgttcaccagaatg
ttttgctgtaagagctgccccaacattgtcaagaccaacaacttcatcaactttcagagc
tacttcttgcagaagacgatgcctgttgccatggcgttactcagagatgtgcagaacctc
tgtcccaaggacgttctccacttcctacttgacctcatcaagtacaatgacaaccgcaag
aacaaattttcagataactactaccgtgcagatctgattgaggccctgaccaactctcta
actccagccatcaccatcaacaacgaggtgccgacggtggacaatttaaatactgatgtc
cgtctgatcttggaagaaatcacaagattcttgaacatggagaaactgctgcctagcttc
aggaacaccatcactgttagctgtctgaaagctatccgtcagctacagaagaatggtcat
atcccaagcgacccattgcttttcaagtcctatgctgagtacggacactttgtagacatt
cggactgctgcgctggaagctctagttgactacaccagagttgagaggtgcaccacagaa
ctgcagtggctgctcaacatggtccagaatgaccctgttcactatgtcagacataagatt
ctgggcatgctctgtaagaatcctcctttcaccaagacggcagactcagctctgtgtaac
gaagctctggtcgatcagctctggaagctgatgaactcaggtacatcccatgactggcga
ctgcgctgcgacgctgtgaatctctactacacgctgttcggtctgacccggccatcgtgc
ctgccgctgccggagctgggcctggtgctcaacctgaaggagaagaaagctgtcctaaac
cctaccatcaagccggagcttggagtcagtgttgtcatggacacgcctgccagtataggc
atccatggcgtgggcatgagctacacatctatggatgaagagccagatcctatttctctg
ggtgtgtgtggagtgggccagccccctcagggcctgaagaggaaggctgagacccctctg
gggtctcctccagagccgggacaggttctacagcaacaggatgatgatggaagagggggg
cgctacaagatcaggttcaacaccatggaggatgaagatattgatatggagactgttcat
gatagtcaggcattcatccaccatcaactaaacctgttagagaggccgtctacaccaggt
aaagagcctccattggtggagcagaccttgctgtccatccccaccacccctgttccctcc
ttctctaaggagaccatctcctcctctaccaaacacggaggagaccacagccatcaccac
caccatcaccaccatgagcacaagaagaagaagaaaaagcacaagcacaaacacaagcat
aaacacaagcatgagagcaaagacaaggaaaaggacagggacaaagacagggacaaccct
catgtctacagcaacagcccagccagcggcaggtccctgcgctccccctctctgtccgac
tga
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