Kryptolebias marmoratus (mangrove rivulus): 108246970
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Entry
108246970 CDS
T05608
Symbol
tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6
KO
K16573
gamma-tubulin complex component 6
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108246970 (tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108246970 (tubgcp6)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
108246970 (tubgcp6)
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
108246970 (tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
Anti-LPS-SCYG
Motif
Other DBs
NCBI-GeneID:
108246970
NCBI-ProteinID:
XP_017290266
UniProt:
A0A3Q3FJK2
LinkDB
All DBs
Position
LG11:9115294..9140364
Genome browser
AA seq
1871 aa
AA seq
DB search
MYLSSNNPTKPVCDSSSITDLLSALCDFNLSGVSWKRRALGGVSRESFQRALKKRAYGAL
LSKLFQDGTKGLASKQSATANTPPRNKVLMMCFDLRVAGCREEAERLEELLERLPEGESS
GLKEVDAVLDLLVFLAGSAPPPLTSFSKDYMRRERPVLRRPRPWSYQSEELQRLEARAWG
LVCAEEWGTLETLCGTHRLMDGLPGTGLLALRTKLEVEERFEKETRLTLFGALQHSRTSD
MDIRLDMPPVPSNIDVTGLAIRIPPCFDQSEDEGFLSASNLTPDSQSEPSPIPDFDIWEA
LRTFEPGRRRCWESVGCPPGKRESFYLTEGGREAFDQLYRLWEGEMRVVSSGTSSPILLL
PLDSQTQLVSDLLNVLIGVASTTFPLNQSVQFDVRPGVCVSGASPESVSRLLGELAQYGT
YYLRLGRFSLQSADKKGLVFQAFTGGLRKYLHYYRACVLSTPPTLSLLTIGFLFRKVGRQ
LRYLSELCCVDGPLGAGQATFPVGVKLLSYLYNEAQSNCSNENYPVLLSLLKSSCEPYTR
FVSDWVYSGVFRDVYGEFMIQVNEEYLSFRDKNFWVQGYTLISKDVEDCVPLFLRHIAND
VYVCGKTINLLKICCPQHYICWSELPVPRIAVTFSLQEVEEIERDCAVYRGRMERIAKHS
AISREEQALRAEQARQELINQVRESAAKTLESIRGRQVSLRLAEEAKKRERFEELKQHLE
QEQEWRSAAKKKQEEDDFSFARELRDREKRLQALEEQLEQRARKELIAQYGRLSEEAARR
ERRAMWRVQRMRLVEARAQFFMLDRQKIQALLENYPLGQERPPTDALPAVPSAQQTLEEQ
SAEPLAAKAESPAQDDSTAKTALISEDTDISDLPTKSPKLDSQQVDKALEEIGSDLPEAR
PAAQLVEYDFSAPFSPHEDIVGQATVQPRPQWGPAVQPELIQNPISIEENVSHVQESVPT
SYPFGGASKTGLSLDQHTPMEDQNTSVQERPPPAAFQQGDGSVTIKSFNQKEAAPVTEQE
FVVSIKGSLAVDASVAKTREDGKDQSDHKELRFSDEIKPAETKTQGRSLNAHDFSDIQSP
VSTKVGELVSEVSQPPLSIHGHSSDAHIKLGHFVSEVTAPLPSPNIHGHASDSHIKIGDY
VSEVVAPPPSSSSHGHSSDAHIKIGENMSEFIPPVPSQNVHGHVSDAHIRVGELVPDVAT
PLPSQSVYGHSSGSHIKVGENVSDFVAPRPAPNIHGHSSDANIKVGEYASNVTEARPRWS
KHGHASDCVLQPGCVVSGTEPPSSALPGSAYGHSSDSALGLGCVVLGDEPERSPLPGSAH
GHSSDSSLGIGCVVSKAEPLPSPLPGSSYGHSSDSAMGVGCVVLGSELPPSALPGSAYGH
SSDSSLGVGCVVLGSELPRSALPGSTYGHSSDSSLGVGCVVKGKDGENQQKTKDDDSKGF
KSGSSVEQHVEESRSWTSGLALSPGEKSEREYLMALSAQYQVEHYEDCFNLMASSPECQL
LQQVTRGPWGLPMDPTLRRATDTTAVQLSEMVSLPVLIKHSVTAPLITHVSLVNKAVVDY
FFVELGVERHFEVLRHFLLMEDGEFAQSLSDLIFEKMGSGQTPGELLTPLVLNSILSKAL
QYSLHGDTPLASNFTFALRFLPETFHPHAPDSLNCLELRYKVDWPLNIIITDSCMNKYNR
LFSFLLQLKHMVWSLRDVWFHLKRTALVKGAGRSVQFRQLQLYRHEMQHFVKVIQGYIAN
QILQVSWTEFTAKLATANDLDAIHRTHADYLNRAIFRGLLTEKAAPVMNIIHSIFSLILK
FRAQLIAQPWDNQQGEAAHPSFIAMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLL
RINFNNYYKDS
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgtacctgagctcaaacaaccccacaaagcccgtctgcgacagcagcagcatcactgac
ctgctgagcgccctctgcgacttcaacctctctggggtgtcttggaagcgcagagccctg
ggaggagtttccagagaaagtttccaaagagctctcaagaaacgagcctacggtgccctg
ctgtccaagctatttcaagatggcaccaaagggctcgcctcgaaacagagtgccacggct
aatacgccgcccagaaacaaagtcctcatgatgtgcttcgacctaagggtggcagggtgt
cgagaggaagcggagcggttggaggagctgctggagaggctgcctgaaggagagtcctct
ggactgaaggaagtagatgcagtgcttgacctcctggtgtttctagctggctctgcgccc
ccacctttgacctctttcagtaaagactacatgagacgagagaggcccgttctgcggagg
ccacgaccttggagttaccagagcgaggagctgcagaggctcgaggcccgggcgtggggt
ctggtctgtgcagaagaatgggggaccctggagactctgtgtggaactcatcgcttgatg
gatggtctaccgggcacaggactgctagctttgaggactaaattggaggtagaagaaaga
tttgagaaagaaaccaggctgacattgtttggagcactgcagcacagtcgcacatcagat
atggacatcagactggacatgcctcccgttcccagtaatattgatgttactgggttggct
atcaggattcctccctgtttcgatcagtctgaggatgagggctttctgtctgcctcaaac
ctgaccccagactctcagtcagagcccagccccattccagactttgacatctgggaggct
ctccgcacatttgagcctggaagacgccgctgctgggagtctgttggctgcccaccagga
aaacgggagtccttctatctgacagagggaggcagggaggcctttgatcagctctatcgg
ctgtgggagggggagatgagggtagtgagctcaggcacatcctctcctatcctcctgctg
cccctggactcgcagacccaattagtatccgacctcctcaatgtcctgataggagtggct
tccactaccttccctctcaaccagagcgttcagtttgacgtcaggcccggtgtgtgcgtg
tcaggggcctctccggagagcgtgtctcgtcttttgggggagttggctcagtatggcacc
tactacctgaggcttggccgcttttctctgcagagcgctgacaagaagggcctagtcttc
caggcgttcaccggaggtctgaggaagtatttgcattactacagggcttgtgttctcagc
accccacctactctcagcctgctgacaatcggcttcctcttccgcaaagtcggacgccag
ctcaggtacctgtcagagctgtgctgcgtcgacgggccgctgggcgcgggccaggccacc
ttccctgtgggggttaaactgctgtcgtacctgtacaacgaggcgcagagcaactgcagc
aacgagaactatcccgtcctgctgtcgctgttgaagagcagctgtgagccgtacacacgg
tttgtttcggactgggtctacagcggtgtgtttcgagatgtttatggagagttcatgatt
caagtcaatgaggaatacctcagcttcagggacaaaaacttctgggtccaaggctacacc
ctgatctcgaaggacgtggaggactgtgtgccgctcttcctcagacacattgccaacgat
gtgtacgtctgcggaaagaccatcaacctcctcaaaatctgctgcccacagcactacatc
tgctggtcggagctgcctgtaccccgcatcgctgtcaccttctccctccaggaggtggag
gagattgagagagactgcgccgtgtatcgcgggcgcatggaaaggattgcgaagcacagc
gctatcagcagggaggagcaagccctgcgagcggagcaggcccgccaggagctgatcaat
caggtcagagagtcggcagcaaaaaccctggagagcatccgagggcgccaggtgtcactg
cgtctggctgaggaggccaagaaacgggagcgttttgaagaactgaaacagcacctggaa
caggagcaagagtggagaagtgcagccaagaagaagcaggaggaggatgatttcagcttt
gccagagagctgagagacagagaaaagagactacaagccctggaggagcagctggagcag
agagccaggaaggagctgattgctcagtacggccgtttgtcagaggaagcggcgcgcaga
gagagacgagccatgtggagggtgcagcgaatgagactcgtcgaagcccgcgctcagttt
ttcatgcttgacaggcagaaaattcaggctttactggagaactatcccttaggccaagag
agacctcccacggatgcgttaccagctgttccctcagcacaacaaacccttgaggagcag
tcagccgagcctctagcagctaaagcagagtccccagcacaggatgactccacagcaaag
actgctctcatctctgaggacactgacatcagtgacctccctactaaatcaccaaagctt
gacagtcagcaagtggataaagccctggaggagattggctctgacctgcctgaagcccgt
cctgctgcacagcttgtagaatatgactttagtgccccctttagtccgcatgaggatatt
gttggccaagccacagtccagcccaggcctcaatggggacctgcagtccagcctgagctg
atacaaaaccccatttccattgaagaaaatgtgtctcatgtccaggagagtgtccctaca
tcctatccgtttggaggagcctctaaaaccggcctttctctggatcagcacacaccaatg
gaggaccaaaataccagtgttcaggaacgacctccgccagctgcttttcagcaaggagat
ggaagtgtcacaattaaaagcttcaatcaaaaggaggctgcacctgtaacagaacaagag
tttgttgtgtccataaaaggaagtttggctgtggatgcttcagttgccaaaacaagagaa
gatggcaaagatcaaagtgatcacaaagaactacgtttttctgatgagataaagccagca
gagacaaaaactcaaggccgcagcttaaatgctcatgatttctcagacattcagagtcct
gtctccaccaaggttggagagctggtttcagaggtctctcagcccccactcagcatccac
gggcattcctctgatgctcacataaagcttggacactttgtatccgaggtaactgctccg
ctgccctccccaaacattcacgggcatgcctccgattcgcacatcaagattggagattat
gtttcggaagtcgttgctcctccaccgtcctctagttcccacggtcactcttctgatgct
cacatcaaaattggggaaaatatgtctgaatttatccctcccgttccctctcaaaacgtc
cacggccacgtgtcagatgctcacatcagagttggggagcttgtcccagacgtagcgacg
cctctgccgtcgcagagcgtctacggccacagctcaggttctcatataaaagttggggag
aacgtctcagacttcgtcgcaccgcgtcccgcccccaacattcacggacactcctccgac
gcaaatataaaagtgggcgaatatgcgtccaacgtaactgaagcaagacctcgctggagt
aaacacgggcatgcctcggactgcgtcctccagcccgggtgtgtggtgtcaggaacagaa
ccgccctcatccgccttgcctggaagcgcttacggccactcctccgattcagcgttaggt
cttgggtgtgtggtcttaggagacgagcccgagcgttctcccttacccggcagcgcccac
ggccattcgtcggattccagtttaggcattgggtgcgttgtttcaaaagctgaaccgctt
ccatcaccactgccaggcagcagctatggccactcatcggactcagctatgggagtcggg
tgcgtggtgttagggtcggagctgcctccctctgctcttccaggcagcgcttacggtcac
tcctcggattcttcattaggtgtcgggtgtgtggtgttagggtcggagctgccacgctct
gctcttccaggcagcacttacggtcactcctcggattcttcattaggagttggatgtgtg
gtgaaagggaaggacggtgaaaatcagcaaaagacaaaagacgacgacagcaaaggtttt
aagtcaggcagctctgttgagcagcatgttgaggagtcgaggtcctggacgtctggttta
gctttgtctccgggagagaagtccgagcgggaatacctcatggctttgtccgcccagtac
caggtggagcactacgaagactgcttcaacctgatggcttcgtcgcccgagtgtcagctg
ctgcagcaggtgactcgggggccctggggccttcccatggaccccacactccgccgagcg
acagacaccacagctgtccagctcagcgagatggtctcgctgcccgtgctgataaaacac
tctgtcactgcgccgctcatcacacatgtgtctctggtgaacaaggctgtggtagactac
ttcttcgtagagctcggggtggaaagacacttcgaggtgctgcgtcacttcctgctgatg
gaggatggcgagtttgcgcagtccctcagcgatctgatctttgaaaagatgggcagtggc
cagactccaggagagctgctgacccccctggtgctgaactccatcctcagtaaggccctg
cagtacagcttacacggggacacccctttggcttcgaacttcaccttcgccctccgtttc
ctcccggaaaccttccacccgcacgccccggactccctcaactgtctggagctgcgctac
aaggtggactggccgctgaatatcatcatcacagacagctgcatgaataagtacaaccgc
ttgttttcgttcctgctgcagctcaaacacatggtgtggagcctcagggatgtttggttt
cacctgaagaggacagcgctggtgaaaggtgcgggtcgctccgtgcagttccgccagctg
cagctgtacaggcacgagatgcagcacttcgtcaaggtcatccagggttacatcgccaac
cagatcctccaagtgtcctggaccgagttcacggccaagctggccaccgctaacgacctg
gacgccattcaccgcacgcatgccgactacctcaacagagccatcttcagaggtctgctg
acagagaaagcagctccggttatgaacatcatccacagcatcttcagcctgatcctgaag
ttccgggcccagctgatcgcccagccgtgggacaaccagcagggggaggcagcgcacccc
agctttattgccatgcagcagtcgtacaacaccttcaagtattactctcacttcctcttt
aaagtggtgactaagctggtgaaccgaggctatcagcctcacttagaggattttctgctc
cgcattaacttcaacaactactacaaggactcttaa
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