Kryptolebias marmoratus (mangrove rivulus): 108247104
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Entry
108247104 CDS
T05608
Symbol
vps54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X2
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108247104 (vps54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108247104 (vps54)
Protein phosphatases and associated proteins [BR:
kmr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108247104 (vps54)
Membrane trafficking [BR:
kmr04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
108247104 (vps54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
108247104
NCBI-ProteinID:
XP_017290481
UniProt:
A0A3Q3ARB0
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All DBs
Position
LG3:4710234..4740871
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AA seq
972 aa
AA seq
DB search
MASPVPRSASGGRDGIYHKEHGPSPPRLRPIRSLPDVCPKEPTGEGRSLCNGPSVVAEHD
RWTVYSSKVNLPAALNDPRLAKRESDFFTKTWGLDFTEMEVMPSFYLPNITREHFGPYLQ
EMSQRERIHERCKTICPNKDDVDAVSSITNYDKSRAELEQVPKIFMKPDFALEDPATFNT
VLPWSHFHSAGGKSIRDGASSKLLQEKLSHYLDVVEVSIARQISLRSEAFFHAMSSQHEL
QDRLQETQQAVAILRSRTAAMDRVMCQGPLWALRSSLTRNNCVKLHNKLKLMAAVHQTQP
TVQLLLSTSEFVGALELITTTKEVLQQELQGIHSFRHLGSQLCELEKLIDKMMVEDFSMY
ARSDLSRSLKEEPQVLEKERLESLVFGLLRQRKLDFLDIYSDEMIIAARSIVTQCVADSV
VLIEQIDTEVTFKLADQMRLMTFPQWFELLKNIFECFLLFLQRIKATLNVIRNVVLEVLV
SNQKSRLPAEASSGKSGQEASQGPLVLQGEAELAYLTHEGLFISDALNEAQQQQEAGSVG
QDQNSTVGFRTQTGRVETADTDPPSGVTEVSASFVSSENMMPTELELNCVISSIQDLLYK
ASDVSHDRCVKVLTARAKDGSLERLNSTEFVSLSQAVEGFVRDTEELCGRTRLSLRGELQ
NQAKRFVHRFHEERKNKLGLLLDNERWKQAEVPAEFQDLVNSIADGKITLPERKTPGPDD
RKPAEFLLVDGQKYAVVGTVLLLIRIFLEYCQCVNDIPSIATDMLTRLSDLLKHFNSRSC
QLVLGAGALQVVGLKTITTKNLALASRCLQLVVHYIPIIRTHFETKLQPKQFSVLRHFNH
ITKDYNDHIAEISAKLVAIMDSLFEKVLSKYEVKAPMPSACFRNVCKQIAKMHEAIFELL
PEEQMQMLFLRINASFKMHLKRQLARLSVINDGGPQHGLVVVDVAFYTENIQALKSLERL
DLNMVEIWEQKR
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcctccccagtgcctcgctccgccagtggaggccgagacgggatctaccacaaggag
cacggcccatcccctcctcgcttacggcccattcgctccctgcctgacgtctgcccgaaa
gagccaacaggtgaggggcggagcttgtgcaatggtccatctgtggtggcagagcatgac
cggtggacagtgtacagttcaaaggtcaacctccctgccgcgctaaacgacccgcggctt
gccaaacgggagtctgactttttcaccaaaacatgggggctggacttcacagagatggag
gtgatgccctccttctacctccccaacatcaccagggaacacttcgggccctacctgcag
gagatgagtcagagggaacggatccacgaacgctgcaagacgatctgtcctaacaaagat
gatgtggacgccgtttccagtatcaccaactatgataaatccagagcggagctggaacaa
gtcccaaagatttttatgaagcctgactttgctttggaggacccagccaccttcaacact
gtcctgccctggtctcatttccacagtgcaggaggcaagagcatcagagacggggcctcc
tccaagctgctgcaggaaaagctcagtcactacctggatgttgtggaggtcagcatcgct
cggcagatctcgctgcgttctgaggcctttttccacgccatgtcctcccagcatgagcta
caggaccggctgcaggagacgcagcaggcggtggccattctgcggagccgaacagcagcc
atggaccgagtcatgtgccagggccctctctgggccctccgctcttctctgacccgaaac
aactgcgtgaaactgcacaacaagctgaagctgatggcggcagtgcatcagacgcagccc
accgtgcagctgctgctctccacctcagagtttgttggagcactggagctcatcaccacc
actaaggaggtacttcagcaagagctgcaggggatccacagcttcagacatctgggctcc
cagctgtgtgagctggagaaactaatcgacaagatgatggtggaggacttcagcatgtac
gcccgcagcgatctgagccggagtctgaaggaggagccgcaggttctggaaaaggagcgt
ctggagtcgctggtgttcgggctgctgcggcagaggaagctggactttctggatatttat
agtgatgagatgatcatagctgctcggtccatcgtcacacagtgtgttgcagatagtgtt
gtgctcattgaacaaattgacactgaagtcacctttaagctagctgatcagatgcgtctg
atgacattccctcagtggtttgagctgctgaaaaacatctttgagtgtttccttctcttc
ctgcagagaatcaaggccacgttaaacgtgatcagaaatgtggttctggaagttttggtc
tcaaaccagaagagccggctccctgcagaggccagttcagggaagtcaggtcaagaggcc
tcccagggcccgttggtcctgcagggggaggccgagctagcttacctcacccatgagggt
ctgttcatcagtgacgcgttgaatgaagcccagcagcagcaggaggctgggtcggtgggc
caggatcagaactccacggtgggcttcaggacccagacgggccgagtggagactgccgac
actgaccccccctctggggtcacagaggtttctgccagcttcgtgtccagtgagaatatg
atgcccactgagttggagctgaactgtgtgatcagcagcatccaggatctgctgtacaag
gcctcagacgttagtcacgatcgctgcgtcaaagtcctcacagccagagccaaggacggt
tctctggagcgtctgaactcaacagagtttgtgagtctctctcaggcagtggagggtttc
gtcagggacaccgaggagctgtgtggcagaactagactgtccctgaggggggagctgcag
aaccaggccaaacgttttgttcaccgcttccacgaagagcgcaaaaacaaactcggtctt
ctcctggataatgagcgctggaagcaggcagaagttccagcagagttccaggatttggta
aactccatagctgatggaaaaataacactaccagagcgcaaaaccccaggtccagatgac
agaaaacctgcagagtttctgctcgtcgatgggcagaaatacgctgttgttgggactgtt
ttgctgctgattcgtatttttctggaatactgtcagtgtgtgaacgacatcccatccatc
gccacggacatgctgacacgtctgtcagacctcctgaaacacttcaactctcgcagctgc
cagttggttctgggagccggagctctgcaggtcgtcggcctcaagaccatcactacaaaa
aacctggcattagcgtcccgctgtcttcagctggtggttcactacattcccatcatcaga
actcactttgagaccaagctgcagcccaaacagttcagtgttctcagacacttcaaccac
atcaccaaggactacaacgatcacatcgcagagatctctgctaagctggtggccatcatg
gacagtctgtttgagaaggttttatcaaagtatgaagtgaaggctccgatgccgtcagct
tgcttcagaaacgtctgtaagcagattgcaaagatgcacgaagctatttttgaacttctg
cctgaagagcagatgcagatgctgtttctgaggatcaacgccagctttaaaatgcacctt
aagaggcagctggcacgactcagtgtcattaatgatggaggaccacagcatgggttggtg
gtggtggacgtggccttctacacagagaacatccaagcgctgaagagccttgaacggctc
gacctgaacatggtcgagatctgggaacagaagaggtga
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