Kryptolebias marmoratus (mangrove rivulus): 108247198
Help
Entry
108247198 CDS
T05608
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108247198
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108247198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
108247198
NCBI-ProteinID:
XP_017290628
LinkDB
All DBs
Position
LG13:23274489..23321405
Genome browser
AA seq
851 aa
AA seq
DB search
MKSGGRGKEPPVAGEVTGKRPKRKCLQWHPLLSKKALDFSEEEEEEDEEDLEKQPVLCNK
DQDPQVQSGSTTEEIEEDSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTSKPVKTPSCQPVGSPRKKVWSLS
CNSPKDSTAKKVPKTESLPQLNFAMADPTKMGGLTMLLLAGEHALTNREIPSNTKPSLPD
MVDEESSCPEEKEEILSQIISNRVPDVPASRVKSTLSVVEESLLSVAPEGKPFIQSTLFQ
LAEMCLASEAGKMDTIVSQPEDSSSSASLQQIPMKSEIKEEGADTYHFPPSTHTSALCPS
LSCVTSTSTDAIPPQNSCQSACVKRKNKKTEEADLNDNNEIPSSAKRISKTCNHLESNID
CVFSTIEAVARGAWMDTEDNNKKIHTSLTGGKSGVLRKKTNTKDKTVIKEKEEKLDDSSG
LNGSSNVEMKGLSDINPKAETGAANMESTDHQANVAKLLDSHCSHSLAKFKEEENEKNKE
KEKPNDAACKANPENCGSRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGAFRTFDHD
TNWSQDSCAVSQIGPNNPKKLKKSKSKDESSQCLGKLEEEFERKFNSLPQYSPLTFDKKG
TTVAKKRKPENSTTQEETAKSAKGVTSNKVVQRDSTSLDSASKIRSCATVALMSPDVQGT
ACMEMLVGSQKRKARKTKITHLVRTADGSVSPAEGGAAEDKTRDPNQEQDKKPLTQQNLC
NETRCYSGSRIPGAEDAGRSTVAQELPAFFSLTALAEVAAMENVHRDQRALAQSQKKELT
QTPVLISCADQ
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtggaggaaggggaaaggagccacctgttgcaggggaggtcactggcaaacgg
cctaaacgcaaatgcctgcagtggcaccctcttctctccaaaaaggccctggacttttct
gaggaggaagaagaggaggatgaagaggatctggagaagcagccagtgctgtgcaataaa
gaccaggatccacaggtgcagagtggtagcacaacagaagaaattgaggaagactccagc
gaacagcgggcacgccggccaatgaatgccttccttctcttctgcaaacgccaccgttcc
ttggttcggcaggaacaccctcgtcttgacaatcggggggccactaaaatcctggctgac
tggtgggctgtgttggagcccaaagagaaacagaaatacacggacatggccaaggagtac
aaggatgcctttatgaaggcgaacccaggctacaagtggtgtcccaccacaagcaaacca
gttaagaccccttcctgtcagccagtcggcagtcctcgcaaaaaagtttggtccttatcg
tgcaactcgcccaaggactccactgccaaaaaagtgcccaaaactgagagtttgccccag
ttaaacttcgccatggcagaccctacaaagatgggaggcctgaccatgctgcttttagct
ggtgaacatgccctcaccaacagagagattccttcaaacactaaacctagtttacctgac
atggtggatgaagaaagctcctgtccagaggaaaaggaagagatcctgtctcagattatt
tccaacagagtgcctgatgttcctgcaagcagggtaaagtcgaccctgtctgtagtggag
gagtctttgctgtcagtggcccctgaaggaaaaccattcatacagtccacgctcttccag
cttgctgagatgtgtttagcgtctgaagctggaaaaatggacacaatagtatctcagcca
gaggacagctcctcgtcagcctcgctgcagcaaattcccatgaaatcagagattaaagag
gagggagctgacacttaccactttcctccttcaactcacacatcagcactttgtccttct
ctttcctgcgtcacttctacctccactgatgccattccaccacaaaacagctgccaaagt
gcatgtgtcaaaaggaagaacaagaaaacagaggaagccgacttaaatgacaacaatgag
atcccatcttcagcaaagaggatcagcaagacgtgcaaccacttggagtcaaacatagac
tgtgtcttcagtactatagaggcagtggccagaggagcctggatggacacggaagacaac
aacaagaagattcacaccagtcttacaggtggaaaatctggtgtgctcagaaagaaaact
aacaccaaagataagactgttatcaaagagaaagaagagaagctggatgacagcagtggg
ctgaatgggtcttctaatgtggagatgaaaggattgtctgacattaaccccaaggcagaa
acaggagcagcaaatatggaaagcactgaccatcaggccaatgtggcaaaacttcttgat
tcccactgcagccattcccttgccaagtttaaagaagaggaaaatgaaaagaataaggag
aaggagaagccaaatgacgcagcgtgcaaggcgaacccagagaactgtggctccaggaag
tcagagcgcagctgtaaaggcgccctgtataaaacccttgtgtctgaaggaatgctgact
tcactgagagcaaatattgatcgaggtaaaagaggagcttttcgtacttttgaccatgat
actaactggagtcaggacagctgtgcagtttcacagataggacctaataatcctaagaag
ctgaaaaagtccaagtccaaagacgagtcttcacagtgcctggggaaattggaggaggag
tttgaaagaaaatttaacagcctgccacagtatagcccattaacctttgataaaaagggc
acaactgttgctaagaaaaggaagcctgaaaactccaccacccaagaagagacagccaaa
tctgcaaaaggagtgacatcaaacaaagtggtacagagagactccacctcactggattca
gcttcaaaaatcagatcatgtgctactgtggccctgatgtccccagatgtccaaggaacc
gcttgtatggagatgctagttgggagccagaagaggaaggctagaaagaccaagatcaca
cacttggtgcgcacagctgatggcagcgtgtctccagctgaagggggagctgcggaggac
aaaactagggaccctaaccaggaacaggataagaagccattaacccaacagaatttatgc
aatgaaacaaggtgctacagtggtagtcgtattcctggggcagaggatgctgggaggagc
accgtagcacaagagctacctgcttttttcagcttgactgctcttgctgaggttgcagcc
atggaaaatgttcacagagaccagagagccttggctcagagtcagaagaaagagcttacc
cagactccagttctcatctcctgtgctgatcagtga
DBGET
integrated database retrieval system
