Kryptolebias marmoratus (mangrove rivulus): 108247239
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Entry
108247239 CDS
T05608
Symbol
cdh4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108247239 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108247239 (cdh4)
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Major cadherins
108247239 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
108247239
NCBI-ProteinID:
XP_017290695
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All DBs
Position
LG4:complement(22149962..22399868)
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AA seq
928 aa
AA seq
DB search
MNGGCVLLLCALLVGASSGSRTGQLQKPPCRPGFSQNFYTVIVSRDMLHGQSILKDTTLS
SERVKFEDCQRSRDVGFVSSDPNFSVRPDGTVYAEQEVANLSEPVQFMVTARGLHDPHIW
ETTVKLALAGHLHPLPLTKITFEEMLSRVWDSQPRVIKFSRKHQRGSSANGLRRQKRDWV
IPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYNIDPISGNMFVT
QPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSRP
GSSVMQVTATDSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREKV
SQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKVNVVVTN
LTVVDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFELNRAFMLTV
VVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKMIRFEEGVPAGTTLTVFAAQ
DPDHFIHQIVRYSKLSDPANWLKINRTNGQITTMALLDRESMYVKNNMYEATFLAYDNGK
SGSPQASGTGTLQIYLIDVNDNAPVLIPREAQTCERARPNSRINITASDADADPNIGPFV
FELPSFPASIRRNWTVSRLSGDYAQLRLRIPYLEAGVYEIPVIVSDSGNPPLSNRSLIRI
KVCPCDNNGDCSATGAVAAAGLGTGAIIAILICIITLLSMVLLFVVWMKRREKERQAKPL
LIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIISKPSGVRRVDERPVIAES
QYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSS
GDQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcggctgcgtcctcctgctgtgcgccttacttgtgggcgcatcctcggggagt
agaacaggccaacttcagaagcctccttgcagacctggcttctcccagaacttctacacg
gtgattgtctccagagacatgctgcacggacagagcatcctcaaagataccaccctgtcc
agcgagcgtgtgaagtttgaggattgccagcgcagcagagacgtgggctttgtcagcagc
gaccccaacttcagcgtgaggcccgatgggacggtgtatgctgaacaagaggtggccaac
ctctcagagcctgttcagttcatggtgacagcgcgggggctgcatgatccccacatctgg
gagaccactgttaagctggccctagctggacatcttcatcctctaccgctcacaaagatc
acctttgaagaaatgctgtcgagagtgtgggactcccaacccagagttatcaagttttct
cgaaaacatcagagaggctcctccgccaacgggctgaggcgacagaagagagactgggtc
atccctcccatcaatgtgcctgaaaactcccgaggacccttcccccacatgcttgtcagg
atccgctcggatcaggacaaggatgtcggcatccgctacagcatcaccggagcaggcgct
gatcagcccccgagtggaatctacaacatagatcccatcagcggcaacatgttcgtcacc
caacccctggacagagaggagagagcatccttccatctgcgagctcatgcagtggacatg
aatgggaaccaagtggagaatccaatagatctgtacatctatgtgatcgacatgaacgac
aacaggcccgagttccagaaccaggtttataacggctctgtggctgaaggctccagacca
ggctcctccgtgatgcaggtgacggccacggactccgacgactccaccacagccaacggc
atggtacgctaccgcatcctgtcgcagaccccccacagtcccatccccaacatgttcacc
atcaacagcgagaccggagacatagttacagtggccgccggcctggacagagagaaagta
tcccagtacaccataattgtccaggccactgacatggaaggaaacctgaactttggactc
tccaatacagccacggctctcatttctattaccgatatcaacgacaatcccccagaactc
acagtcaggacgttttccggcgaggttccggagaacaaggtgaatgtggtggtcaccaac
ttgacagtggtggacagagatcagccccacagccccaactggaacgccgtctatcgcatc
gtcagcggagacccatctggtcacttcaccatccgcaccaatcccatcacgaatgagggc
atgctgacagtggttaagccggtggatttcgagctgaatcgtgctttcatgctgactgtg
gtggtgtccaaccaggcccatctggcgagcggcattcagtcctcccttcagtccacagcc
ggagtcaccatctccgttcaggacgtaaacgagccgcccgtcttccccgtcaacccaaag
atgatccgttttgaggagggcgtgccggcagggaccactctgacggtgtttgccgcccaa
gaccccgaccacttcatccaccagattgtcaggtactccaagttatcagacccagcgaac
tggctgaagatcaacaggaccaatggtcagattaccaccatggccctgctggacagagag
tccatgtatgtcaaaaacaacatgtatgaggccacattcttggcgtacgacaatggtaag
tctggttcgcctcaagccagcgggacggggacgctccagatttacctgatcgacgtgaat
gacaacgcgccggtgctgataccccgggaggcgcaaacctgcgagcgagcgcgccccaac
tccaggatcaacatcacagcttcggacgctgacgccgaccccaacatcgggccctttgtc
ttcgagctgccgtcttttcccgccagcatccgtcgcaactggaccgtttctagactgagc
ggtgactacgctcagctccgactaaggattccctacctggaggcgggtgtgtatgagatc
ccagtcatagtgtcagactcagggaacccccctctgtccaaccgctctttaatcagaatc
aaagtgtgtccctgtgacaataacggggactgcagcgccacgggggctgtggcggctgcc
ggtcttggcaccggagccatcatcgccatactcatctgcataattacactgctcagcatg
gtcctgttgtttgtggtgtggatgaagcgcagggagaaggagcggcaggcgaagcccctg
ctgatagaccccgaggacgacgtcagggacaacatcctgaagtatgacgaggagggagga
ggagaggaggaccaggactacgacttgagccaactgcagcagcccgagtccctggaccac
atcatcagtaaaccatcgggggtgcgcagagtggatgagaggcctgtgatcgccgagtcg
cagtaccccgtcagacccagtctgccccacccaggagacataggagacttcataaatgat
ggtctgagagcagccgacaacgaccccactgcccctccttacgactccctgctggtgttc
gactacgagggcagcggctcaaccgccggctccgtgagctcgctcaactccagcagctca
ggagaccaggactacgactacctcaacgactggggtcctcgcttcaagaagctggcagat
ctctacgggggaggagacgatgactga
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