Kryptolebias marmoratus (mangrove rivulus): 108247347
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Entry
108247347 CDS
T05608
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108247347 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108247347 (dhx8)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108247347 (dhx8)
Spliceosome [BR:
kmr03041
]
Complex C
Other components
Step II factors
108247347 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
Flavi_DEAD
T2SSE
TsaE
PhoH
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108247347
NCBI-ProteinID:
XP_017290884
UniProt:
A0A3Q3A901
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All DBs
Position
LG17:complement(24082569..24096457)
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AA seq
1216 aa
AA seq
DB search
MADGGVDELSQLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKQPSFDGFKALLLEN
GAEFTDSLIGNLLRLIQTMRPPSKASTSKASEASVKPKSEKERLKEMFPALCRANDPSPK
RILDEDDVKVAADAMKELEMFMPSVSGKDSKVIKNKSEKSKRHSRSRSRSRERDRHRDRD
RDRDRDRKRRHRSRSRSRSRSRSRDRDRHRDRDRDRGKRRDKSSRWADRSPSPRKDQDRD
SDRWKDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGR
VANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVGPEGGEDVSMR
NPDRPSNLNLGHAPELEQDDTLERKRLTKISDPEKWELKQMIAANVLSKEEFPDFDDETG
ILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAK
ERRELKQAAREAEMDSIPMGLNKHWVDPLPDADGRQIAANMRGIGMMPNDIPEWKKHAFG
GNKASYGKKTQLSILEQRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAE
AGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDG
MLLRECLIDSELGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVK
FSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQE
EIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAET
SLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYT
ERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTL
GALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDK
QALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLG
IMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNR
QPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNR
YEEPNAWRISRAFRRR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggaggggttgacgagctttcgcagctcgaatatttgtctttggtgtccaag
gtctgcacggagctcgacaaccatctgggaattaatgacaaagatttagccgaatttgtc
atcagtctggcagagaaacaaccgagcttcgatggattcaaggctcttttgctcgaaaat
ggagccgaattcacggattcgctcatcggtaacttgctcaggctcattcagacaatgcga
cctccttccaaagcctcaacgagtaaagcctctgaggcttcggtcaaaccaaaatccgaa
aaagaaaggttaaaggagatgtttcctgcactttgtcgagccaatgatccatcaccaaag
cgtatactggatgaagatgatgtgaaagtagcagctgatgcgatgaaagaactggagatg
tttatgcccagtgttagtgggaaagactctaaagtgatcaagaacaaatcagaaaaaagc
aaacgtcacagccggagtcgcagcagaagcagagaaagagacagacacagagacagggat
agggatcgggacagggacaggaagagacggcaccgctctcgatcacgctccaggtccagg
tctcgctccagagaccgcgatcgtcacagagaccgagacagagaccgtggaaaaaggaga
gacaagtcttcccgctgggctgatcggtcacccagcccccgaaaagaccaagacagggac
tctgacaggtggaaggacaaacatgtggaccggcctcctccagaggagccttctgttggt
gacatctacaacgggaaggtcaccagcatcatgcagtttgggtgctttgttcagctggag
gggttaagaaaacggtgggagggtttggtccacatttctgagctgcgcagggagggccgg
gtggccaacgtggccgacgttgtgagcaaaggccagagagtcaaagtcaaggtgctgtcg
ttcaccggctccaagaccagcctcagtatgaaggatgtggaccaggagacaggtgaagat
ctgaaccccaacaggaggagaaatgtaggtcctgaaggaggagaggacgtgtccatgagg
aaccccgacaggcccagcaacctgaacctgggccacgctcctgagctggagcaggacgac
actctggagcgcaagaggctcacaaaaatctctgacccggagaagtgggagctgaaacag
atgattgctgccaacgtgttgtccaaagaagaattccccgatttcgatgatgagacgggg
atccttccaaaagtcgatgatgaagaggatgaagatttggaaatcgagcttgttgaagag
gagcctccgtttctgagaggacacaccaaacaaagcatggacatgagtcccgtcaagatt
gtgaagaatccagatggctccctgtcacaggcggcgatgatgcagagcgctctggctaag
gagaggcgagagctgaagcaggctgctcgagaggcagagatggactccatccccatgggg
ctgaacaaacactgggtcgacccgctgccagacgctgatggtcggcagattgctgctaac
atgagagggatcggcatgatgcccaatgacatcccagagtggaagaaacatgcttttggg
ggcaacaaagcctcgtatgggaagaagacccagctctccatcctggagcagagggagagc
ctgcccatctacaagctgaaggagcagctcattcaggctgttcatgacaatcagattttg
atcgtcattggagagacgggttctggtaagaccacccagatcactcagtacctggcagaa
gcgggttacaccaccagagggaagatcggctgcacgcagccccgtcgtgtggctgccatg
tctgtggccaagagagtctccgaggagtacgggtgctgtctgggacaagaggtgggttat
accatccggtttgaggactgcaccagtcctgagacggtcatcaagtacatgacagacggt
atgctgctgagggagtgtttgatcgactcggagttgggccagtacgccatcatcatgttg
gacgaggcccacgagaggacgatccacaccgatgttctgtttggtctcctcaagaagacg
gtacagaaacgcacagacatgaagctgatcgtaacttctgctacgctggatgccgtgaag
ttctctcagtatttctacgaagctcccatcttcaccatcccaggcagaacgtatcccgtt
gaggttctttacaccaaagaacctgagacggattatctggacgccagcctcatcactgtc
atgcagattcatctgactgagcctccaggtgacatcctggtgtttctaacgggtcaggaa
gagatcgataccgcctgtgagatcctgtatgagagaatgaagtctcttggacccgacgtt
cctgaactcattatcctgccggtttattctgctctgcccagtgaaatgcagaccaggatt
tttgaccctgcacccccgggcagcagaaaggttgttattgctacaaacatcgcagagacc
tccctgaccatcgatgggatctattatgtggtggaccctggcttcgtcaagcaaaaagtg
tacaactctaagaccggcattgaccagctggtggtgactcccatctcacaggctcaggcc
aagcagagggcaggtcgggccggcagaactgggcctgggaagtgttacagactttacact
gaaagagcctacagggatgagatgctgaccaccaacgtgcccgagatccagaggactaac
ttggccagcaccgtgctgtctctgaaggccatgggcatcaatgacctcctgtccttcgac
ttcatggacgctcctcccatggagacgctgatcacagccatggagcagctctacactctg
ggagctctggacgatgagggcttactcacacggctcggtcgaaggatggctgagttccct
ctggagcccatgctgtgcaagatgctgatcatgtccgtccatctgggctgcagtgaagag
atgctcacgattgtgtcaatgttgtctgttcagaatgtcttctacagaccgaaggacaag
caggccctggccgaccagaagaaggcgaagttccaccagcctgagggcgatcacctcacc
ttgctggccgtgtacaactcgtggaagaacaacaagttctccaacccttggtgttacgag
aacttcatccaggctcgctccctgcgcagagctcaggacatccgcaaacaaatgctgggc
atcatggacagacacaaactggatgtggtttcttgtggcaaagcaaccgtacgagtccaa
aaggccatctgcagtggtttcttcagaaatgcagccaagaaggatcctcaggagggctac
agaaccctcatagaccagcaggtcgtttacatccacccatcaagtgctctgttcaaccgg
cagcctgagtgggtcgtgtaccacgagttggtcctgactaccaaggagtacatgcgggag
gtaaccaccatcgatcctcgctggctcgtggagttcgctcccgccttcttcaaagtgtcc
gaccccacgcgcctcagcaagcagaagaaacagcaacgcctcgaaccgctgtacaaccgc
tacgaggaacccaacgcctggagaatctcccgcgccttcaggcgccgctga
DBGET
integrated database retrieval system
