Kryptolebias marmoratus (mangrove rivulus): 108247370
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Entry
108247370 CDS
T05608
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04260
Cardiac muscle contraction
kmr04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108247370
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108247370
04261 Adrenergic signaling in cardiomyocytes
108247370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108247370
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108247370
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
VWA_CoxE
WAK_assoc
dCache_2
Motif
Other DBs
NCBI-GeneID:
108247370
NCBI-ProteinID:
XP_017290919
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Position
LG4:13225299..13260547
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AA seq
1164 aa
AA seq
DB search
MEGNCRNPFLHVCSSSSFLLLWIFIGLNWAEGAAGSQQGIPLSVVKLWASAFGGEIKSIS
AKYSGSQLLQKELWSITAPRSGANSSSENSPVRISSRISPKSSAACLWEESGGARGGPRK
YGESVQTAFRKRLQAQNPGSSCPEKYKEPEKSVRVEEIDGVKVVKNLAVKMEEMFRKKAE
ATRRLVEAAEEAHHQHEENPDLQYEYFNAVLINEVDEEGNNVELGGEFILEPNDHFNNLS
VNLSLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVENFERDPTLIWQYFGSAKGFFRQY
PGVKWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILD
TLGDDDFFNIIAYNQEIHYVEPCLNGTLVRADRTNKDHFREHLDKLFAKGIGLLGEALTE
AFTILSDFNQTGHGSLCSQAIMLVTDGATKMYDDVFEKYNWPERKVRIFPYLIGRESAFA
DNLKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALTHA
HKLNEKSGPSLTTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGYA
FAITNNGYILTHPDLRPLYQEGQKRRKASYSSVDLSEVEWEDKDDILRNAMVNRRTGTFS
MEVKRTVDRGRRVLKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSTDAGLRDLEQ
PDVALADEWTYCNTEEKHEHRHLSQIQAIKLFMTGRKSHFKCDRELIQEVLFDAVVTAPL
KNYWNSLALNKSENPDKGVEIAFLGTRTGLSRTKQFVPTDQLSNQDFLTAEDKEGVFNAD
HFPLWYKRAAEQVPGTFVYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGLQMKLE
YFQRKFWTACRQCTALDGKCSISCDTEDINCYLIDNNGFILVTEEQSQTGLFFGEVEGAV
MNKLLQMGCFKRITLYDYQALCREYAGSSDSARTLSDPFSMVKWLLTELVIFLLEFNLYS
WWNVDLSVRAQRSRGKTMMVPCDTEYPAFVSERTIKETTGNIECDGCIRSFVIQQIPSSN
LFMVVVDNKCDCSRIPPVTMDPIEIIYNESLKCDRLKLQKDRKKPESCHPFHPEENAMEC
GSASRLSSHLAVNLLPLVAATISR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaactgcaggaatccctttttgcacgtgtgcagcagcagcagcttcctcttg
ctctggatcttcatcggcttgaactgggctgagggggcggcggggtcccagcaagggatt
cctctttcagtagtaaagctttgggcctctgcattcggtggagaaattaaatcgatttct
gcaaaatattctggatctcagttattgcaaaaggagctgtggtccatcacagcgccacga
tcgggggccaactccagttctgagaacagtcctgttaggatcagcagcaggattagtccc
aagagctcagctgcttgtctgtgggaggaaagtggaggcgctagaggaggtcctcgaaag
tatggagaaagtgtgcaaactgcattcagaaagcggctgcaggctcaaaatccaggatca
tcgtgccctgagaaatataaagaacctgaaaagtcagtcagagtggaggaaattgatggt
gtgaaagtggttaaaaacctggctgtgaagatggaggaaatgttccggaagaaagcagaa
gccaccaggcggctggtggaggcggcggaagaagcgcaccatcagcatgaagaaaatcca
gacctgcagtatgaatacttcaatgctgtgctgatcaatgaagtggacgaggagggcaat
aatgtggagctgggcggcgagttcatcctggagcccaacgaccatttcaacaacctctca
gtcaatctgagcctcagtgtggtgcaggtgcccaccaacatgtacaacaaagatcctgac
atcgtgaacggggtttactggtccgaggccctgaacaaagtcttcgtggagaacttcgaa
agagatccgacactaatctggcagtactttggaagcgccaaaggctttttcaggcagtat
cctggagtaaagtggcatccagacgagcatggcgtcatcggctttgactgcagaaatcgg
aagtggtacatccaggcagcaacgtcccccaaagacgtggtgattttagttgatgttagt
ggaagcatgaaggggctgaggctgaccatcgccagacagactgtttcctccatactggac
actctgggagacgatgacttcttcaacatcattgcatacaatcaggagatccactatgta
gagccttgtctgaatggtacgctggtccgggccgacagaacaaacaaagatcatttccgt
gaacatctggacaagctgtttgccaaagggattggacttctgggtgaagctctgaccgaa
gcgttcaccatcctgagcgattttaatcagacaggacatggcagtctgtgcagccaggcc
atcatgcttgtcactgatggagcaactaaaatgtatgacgatgtttttgagaagtacaac
tggccggaaagaaaagtgcgcatattcccctacctgattggacgagagtctgcgtttgct
gataatcttaaatggatggcttgtgccaacaaaggatatttcagtcagatctccactttg
gctgatgttcaggagaacgtgatgaggtatcttcatgtcatgagtcgtccaaaggttatc
gatcatgagcacgacacagtttggactgaggcttacgtggatagtgctctgactcacgct
cataagcttaatgagaaatcaggtccatctctgaccacgacagtcgccatgccggtgttc
agcacaaagaatgaaacgaagaatcagggtattctgttgggggtcgtaggaacagacatc
cctctgcaggagctgatgaagctcatcccaaaacatatgttagggatccatggatatgcg
tttgccatcactaacaacggctacatcctgactcatccggacctcaggcctttgtatcag
gaaggtcagaagaggaggaaggccagctacagcagcgtggatctgtctgaagtggagtgg
gaggacaaagacgacattctgcgcaacgccatggtaaacaggaggacggggactttctct
atggaggtgaagaggactgtggacagagggaggcgtgtgctcaagatgcacaacgactat
tactacacggatatcaaaggaactccattcagtgttggagtagctctctcaagaggccac
gggaaatacttcttcagaggaaatgtgtccacagacgcagggctccgtgatctggaacag
ccagatgtcgccctggcagatgaatggacctactgcaacactgaggagaagcacgagcac
cgtcacctgagccagattcaagccataaagctcttcatgacgggccgcaaatcgcacttc
aagtgtgacagagagttgatccaggaggtgttatttgatgctgtggtcactgctcctctg
aagaattactggaatagtctggctctcaacaaatcagagaacccagacaaaggagtggag
atcgccttcctgggaacacggaccggtctgtcgagaaccaaacagtttgttcccaccgat
cagctctccaatcaagacttcctgactgctgaggacaaggagggagtgtttaacgcggat
cactttcctctgtggtacaagagagcagcagagcaggtccccggcacgtttgtctactcc
atacccttcagcacagctttagaaaacaagagtgtggttttggccagcacagcgatccag
ctcctcgatgacagaaagtctcccattgttgctgctgtaggacttcaaatgaagcttgag
tattttcagaggaagttctggacggcctgcagacagtgcacagctctggatggaaagtgt
agcattagctgtgatactgaggacattaactgttacctgattgacaacaatggcttcatt
cttgtgacagaagaacagtctcagacagggctcttctttggcgaggtggagggagctgtt
atgaacaaactgcttcagatgggatgttttaaaaggatcaccctgtatgactatcaggct
ctttgcagagagtacgccgggagcagcgacagtgctcgcactttatcagaccctttttct
atggttaagtggcttctgacggaacttgtcatttttctgcttgaattcaacctgtacagc
tggtggaacgtcgacctgtcagttagagctcagaggtctcgaggtaaaaccatgatggtg
ccttgtgacacagaataccctgcctttgtctccgaacgcaccattaaagaaacaacagga
aacattgagtgcgacggctgtataaggtcttttgtcatacagcagattcccagcagcaac
ctgttcatggttgttgttgacaacaagtgtgactgcagcagaattcctccagtgaccatg
gatcccatcgagatcatctacaacgagtcattaaaatgtgacagactgaagcttcagaag
gacagaaaaaagccagaatcatgtcatcctttccaccctgaggaaaatgccatggagtgt
ggttccgcctctcgcctctccagtcatctggcagtaaatctgctgcctctggtagcagca
accatcagcaggtga
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