Kryptolebias marmoratus (mangrove rivulus): 108247402
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Entry
108247402 CDS
T05608
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108247402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108247402
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108247402
Intermediate filaments
Intermediate filament-binding proteins
108247402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
108247402
NCBI-ProteinID:
XP_017290988
LinkDB
All DBs
Position
LG22:complement(8345549..8485288)
Genome browser
AA seq
2368 aa
AA seq
DB search
MELQSATGPLPGSLSPLSPTSDYPGPLMSPSSGGPGPSLSPTRRSSPDPGFSGQAAFNYN
QLEGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGER
LPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQI
QDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDL
IDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSK
MKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLIGVQQ
QLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLISDINKAWERL
EKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEA
ATKKHEAIETDIAAYEERVQAVVAVAKELEAESYHDIKRITARKDNVIRLWEYLLELLKA
RRLRLELNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGI
QVDRVRNVNSNAQRFATDSDGYKPCDPQIIRDRVAHLEFCYQELTQLAAERRARLEESRR
LWKFFWEMAEEEGWIKEKEQILSSEDYGKDLTGAVRLLSQHKAFEDEMSGRAAHLQQTIK
QGDELVADNHFGAEKIKERIRDIQEQWAALERLSAVRKARLQEAVNQHQFQADADDIDTW
MLDVLRIVSSVDVGHDEFSTQALVKKHKDVAEEIESYRPVIEALHDQARTLPPEKADSEE
VQSRLAGIEERYREVVELTRLRKQALQDALALYKMLSEARACELWIDEKEQWLNSMEIPE
KLEDLEVVQHRFESLEPEMNSQASRVAVVNQVARQLIHSGHPSEKEIKAQQDKLNTRWSQ
FRDLVDQKKENLNSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDLAGVMALQRKLT
GMERDLVAIEDKLSDLGKEAERLASEHPEQSEAITGRLAEITGVWDEMKDSLKNREESLG
EASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLAQHEGIKNEVRNYEEDYQ
KMRDMGEMVTRGQTDAQHMFLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTK
QAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKISGVVDAGCRLVADG
NVNAERIQEKVDSIDQRRKKNRQAANDLLARLKDNRDLQKFLQDCQELSLWINEKMLTAQ
DMTYDEARNLHSKWLKHQAFMAELQSNKEWLDKIKKDGQTLMAEKPDTEAMVKEKLASLT
SMWDDLESTTQTKAKCLFDANKAELFTQSCADLDKWLTGLDGQLQSDDYGKDLTSVNILL
KKQQMLESQVEVRQKEVEELQRQSQALSQEGKGSDEVDGQRISVEHKFHTLQAPLQKRRD
NLMASREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQP
RYDDIFERSQHILREGSPTAELIRQRLADLQSLWEQIKKETEKRHSRLSEAHKAQQYYFD
AAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADAVHQLSSTSRGLVA
AGHPDSERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVV
AGSHELGQDYEHVTMLQERFREFARDTGTIGQERVDGVNRLADELINSGHGDAATIAEWK
DGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVE
TLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLEAA
EGRRAKLADTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEI
DARNDSFTACIELGKALLARKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVH
QFSRDAGVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHESFEKSAATWEERFSALERLT
TMELLEVRRRQEEEERKRQPAEAADAAAQHREGEPVSQNGLPSEQESPREAVDGADVVNG
VSGPSPSGSPGASRKGKPSQAATLPAKTQQDAPVPQMEGFLHRKHEWEGHNKKASNRSWH
NVYCVINHQEMGFYKDQKSAGQGIPYHSEIPVSLKDAVCEVAVDYKKKKHVFKLKITDGN
EYLFQAKDDEEMNTWISKISAAMAGEKSEVTPSGHSTPAPAPAARAQTLPASVAATAAAA
ATTTAAESSPGKREKDKEKRFSLFSKKK
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagcgccacgggtcccctgcccggatccctctcacccctctcgccgacc
tcggactacccgggccccctgatgtcgccgtcttcgggcggccccggcccgtccctcagc
cccacgcggaggtccagtcctgacccggggttctcgggacaggctgccttcaactacaac
cagctggagggtcggttcaaacagctccaagatgagcgcgaggcggtccagaagaagacc
ttcaccaagtgggtcaactcccacctgtccagagtctcctgcaggattacagacctctac
atggacctgagggacgggcgcatgctcatcaagctgctggaggtcctgtcaggagagcga
ctgcccaaacccacaaagggccggatgaggatccactgcttggagaacgtggacaaagcc
ctgcagttcctgaaggagcagagggtccacctggagaacatgggctcccacgacatcgtg
gacgggaaccaccggctgactctggggctcatctggaccatcatcctccgcttccagatt
caggacatcagcgtggagacggaggacaacaaggagaagaagtcggccaaagatgctctg
ctgctctggtgtcagatgaaaactgcagggtatccaaacgtcaacatccacaacttcacc
accagctggagagacggcatggccttcaacgccctgatccacaaacacaggcccgacctg
atcgacttcgacaagctgaagaagtccaacgctcactacaacctgcagaatgccttcaac
ctggccgagcagcacctcggcctcaccaagctgctggaccctgaagacatcagcgtggac
caccctgacgagaagtccatcatcacctacgtggtcacctactaccactacttctccaag
atgaaggcgctgaaggtggaggggaagcgaatcggaaaggtgctggacaacgccatcgag
acggagaagatgatcgagaagtacgagtccctggcgtccgacctgctggagtggatcgag
cagaccatcatcatcctcaacaacaggaagttcgccaactctctgatcggcgtccagcag
cagctgcaggccttcaacacctaccgcaccgtggagaagccgccaaagttcacggagaag
ggcaacctggaggtcctcctgttcaccatccagagtaagatgcgcgcaaacaatcagaag
gtctacacgcctcgggaggggaaactcatctccgacatcaacaaggcgtgggagcgcctg
gagaaggcggagcacgagcgggagctggcgctgaggaccgagctgattcgccaggagaag
ctagagcagctcgctcggcgatttgaccgcaaagccgccatgagggagacttggctgagc
gagaaccagaggctggtctcgcaggataactttggattcgacctgcaggctgtcgaagcc
gccacaaagaaacacgaagccatagaaacggacatagccgcctacgaggagcgagtccag
gctgtggtcgccgtggcgaaggagctggaggcggagagctaccacgacatcaagcgcatc
acggccaggaaggacaacgtgatccggctgtgggagtacctgctggagctgctgaaggcg
cgcagactgaggctggagctgaacctgggcctgcagagggtcttccaggagatgctctac
atcatggactggatggacgagatgaagatgctgctgctctctcaggactacgggaagcac
ctgctgggcgtggaggacctgctgcagaagcacgcgctggtggaggccgacatcggcatc
caggtggaccgggtccgcaacgtcaacagcaacgcgcagagattcgccaccgacagcgac
ggttacaaaccctgcgaccctcagatcatccgggaccgcgtggcgcacctggagttctgc
tatcaagagctgacccagctggcggccgagcggcgggctcgcctcgaggagtcccgccgc
ctctggaagttcttctgggagatggcggaggaggagggatggatcaaagagaaggagcag
atcctctcctccgaggattatgggaaggatctgacgggcgccgtgcggctgctgagtcag
cacaaggccttcgaggacgagatgagcgggcgagccgcccacctgcagcagaccatcaag
cagggcgacgagctggtggcagacaaccacttcggagccgagaagatcaaggagcgaatc
cgggacatccaggagcagtgggcggctctggagcgcctctccgccgttcggaaggctcgt
cttcaggaggcggttaaccagcaccagttccaggctgacgccgacgacatcgacacctgg
atgctggacgtcctgcgcatcgtttccagcgtcgacgtcggccacgacgagttctccacg
caggctctggtgaagaagcacaaggacgtcgccgaggagatcgagagctaccgccccgtc
atcgaggccctgcacgaccaggcccggacgctgccgccggagaaggccgactccgaggag
gttcagagccggctggcgggcatcgaggagcgctacagggaggtggtggagctgacgcgg
ctccggaagcaggccctgcaggacgccctggcgctctacaagatgctgagcgaagcccgc
gcctgcgagctgtggatcgacgagaaggagcagtggctcaacagcatggaaatcccagag
aaactggaggacctggaggtggtccagcaccggttcgagagtctggagccggagatgaac
agccaggcgtcccgggtggccgtggtcaaccaggtggctcggcagctaatccacagcgga
catcccagcgagaaggagatcaaagcccagcaggacaagctcaacaccaggtggagtcag
ttcagggacctggtggaccagaagaaggagaacctgaactccgctctgggggtccagaac
taccacctggagtgcaacgagaccaagtcctggattaaagagaagaccaaggtgatcgag
tccacccaggagctgggcaacgacctggccggcgtcatggccctgcagagaaagctgacc
ggcatggagcgcgacctggtggccatcgaggacaagctgagcgacctgggcaaggaggcg
gagcggctggcgtcggagcacccggagcagtccgaggccatcacaggacgtctggcggag
atcacgggcgtctgggacgagatgaaggactcgctgaagaaccgcgaggagtccctgggc
gaggccagcaagctgcagcagttcctgcgcgacctggacgacttccagtcgtggctgtcg
cgcacgcagaccgccatcgcctccgaggacatgccgaacacgctggccgaggccgagaag
ctgctggcccagcacgagggcatcaagaacgaggtgcgcaactacgaggaggactaccag
aagatgcgcgacatgggcgagatggtgacgcggggccagacggacgcgcagcacatgttc
ctgcggcagcggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgggag
aaccgccagagcctgctgtcccagtcccacgcctaccagctgttcctgagggacaccaag
caggccgaggccttcctcaacaaccaggagtacgtcctggcccacacggagatgcccacc
accctggagggggcggaggctgccatcaagaagcaggaggacttcatgaccaccatggac
gccaacgaggagaagatcagtggcgtggtcgacgccgggtgccgcctggtcgcggacggc
aacgtcaacgccgagcgcatccaggagaaggtggactccatcgaccagaggcgcaagaag
aaccgacaggctgccaacgacctgctagcgaggctgaaggacaacagggacctgcagaag
ttcctgcaggactgccaggagctgtccctgtggatcaacgagaagatgctgacagcccag
gacatgacgtacgacgaggcccggaacctgcacagcaagtggctcaaacaccaggccttc
atggccgagctgcagtccaacaaggagtggctggacaagatcaaaaaggacggccagacg
ctgatggcagagaagccggacacggaggccatggtgaaagagaagctggcgtccctgacg
tcgatgtgggacgacctggagtcgaccacgcagaccaaagccaagtgtctgttcgacgcc
aacaaggccgagctgttcacgcagagctgcgcggacctggacaagtggctgacgggcctg
gacgggcagctgcagtccgacgactacggcaaagatctcacctccgtcaacatcctgctg
aagaagcagcagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctg
cagcggcagtcgcaggccctcagccaggaggggaagggctccgacgaggtggacggccag
aggatcagtgtggagcacaagttccacaccctccaggccccgctgcagaagaggcgggac
aacctgatggcctcgcgcgagatccaccagttcaacagggacgtggaggacgagatcctg
tgggtggaggagaggatgcccctggccacgtccacggaccacggacacaacctgcagacc
gtccagctgctcatcaagaagaaccagacgctgcagaaggagatccagggccaccagcct
cgatacgacgacatcttcgagcgcagccagcacatcctgagggagggcagccccacggcg
gagctgatccgccagcggctcgccgacctccagtccctgtgggagcagatcaagaaggag
acggagaaacgccactctcgcctgagcgaggcccacaaggcccagcagtattactttgac
gctgccgaggccgaggcctggatgagcgagcaggagctctacatgatgtcagaggagaag
gccaaggacgagcagagctcagtggccatgctgaagaagcatcagatcctggagcaggcg
gtggaggactacgccgacgccgtccaccagctgtcgagcacgagccgcggcctggtggct
gccggacaccccgacagcgagcgcatcggcatgcgtcagtctcaggtggacaagctgtac
gcgggcctcaaggacctgtcggaggagcgccgggggaagctggacgagcgcttccgcctc
ttccagctcaaccgggaggtggacgacttggagcagtggatcgccgagagggaggtggtg
gccgggtcccacgagctgggacaggactacgagcacgtcaccatgctgcaggagcgtttc
agagaatttgcccgcgacacgggaaccatcgggcaggagcgcgtggacggcgtcaaccgg
ctggccgacgagctgatcaactcgggccacggcgacgccgccaccatcgccgagtggaag
gacggcctgaacgaggcgtgggccgacctgctggagctcatcgacacccgcacgcagatc
ctcgccgcctcctacgagctccacaagttctaccacgacgccaaggagatcctcaaccgc
atcctggacaagcacaagaagctcccggaggagctgggccgcgaccagaacacggtggag
accctgcagaggatgcacaccaccttcgagcacgacattcaggctctgggaacgcaggtg
cgccagcttcaagaggacgccgtccgcctgcagtcggcctacgcaggagacaaagccgac
gacattcagaagagagaaggcgaggtcctggaggcctggaagaacctgctggaggcggcg
gagggtcggcgggcgaagctggccgacaccggagacaagttccgcttcttcagcatggtg
cgcgacctgatgctgtggatggaggacgtgatccggctgatcgaggcccaggagaagccc
agagacgtgtcgtcggtggagctgctgatgaacaaccaccagggcatcaaggcggagatc
gacgctcgcaacgacagcttcacggcctgcatcgagctggggaaagccctgctggcccgg
aaacactacgcttcggaggagatcaaagaaaagttgttacagttgacggacaagaggaaa
gagatgatcgacaagtgggaggacagatgggagtggctccgactggtcctggaggtgcac
cagttctcgcgggacgccggcgtggccgaggcgtggctgctgggccaggagccgtacctg
tccagcagggagatcgggcagagcgtggacgaggtggagaagctcatcaagcgccacgag
tccttcgagaagtcggccgccacctgggaggagcgcttctcggcgctggagaggctgacc
acgatggagttactggaagtgagaagaaggcaagaggaggaagagaggaagaggcaacca
gcggaggctgccgacgctgcggctcagcacagagagggcgagccggtgtcccagaacggg
ctgccatccgagcaggagtctcccagggaggccgtcgacggcgccgacgtggtgaacggc
gtgtcggggcccagtccgtcggggtctcccggggcgtcgcggaagggcaagcccagccag
gcggcgaccctgccggctaaaacccaacaggacgccccggtgcctcagatggagggcttc
ctgcaccgcaagcacgagtgggagggccacaacaagaaggcgtccaacaggtcgtggcac
aacgtgtactgcgtgatcaaccaccaggagatgggcttctacaaggaccagaagagcgcc
ggtcagggcatcccctaccacagcgagatccccgtcagcctgaaggacgccgtatgcgag
gtggctgtggattacaagaagaagaagcacgtctttaagctcaagatcaccgacggcaac
gagtatctcttccaagccaaagatgatgaggagatgaacacctggatctccaagatctcc
gccgccatggcgggtgagaagtcagaggtgactcccagcggccacagcacgccggccccc
gcgcccgccgcccgcgctcagacgctgccggcctccgtggcagcaacggcggcagcggcg
gcgaccacgacggccgccgagtcgagccccggcaaacgagagaaggacaaggagaaacgc
ttcagtctgttcagcaagaagaaatag
DBGET
integrated database retrieval system
