Kryptolebias marmoratus (mangrove rivulus): 108247402
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Entry
108247402 CDS
T05608
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04517
IgSF CAM signaling
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108247402
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108247402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
kmr04812
]
108247402
Cytoskeleton proteins [BR:
kmr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108247402
Intermediate filaments
Intermediate filament-binding proteins
108247402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
108247402
NCBI-ProteinID:
XP_017290988
LinkDB
All DBs
Position
LG22:complement(8345549..8485288)
Genome browser
AA seq
2368 aa
AA seq
DB search
MELQSATGPLPGSLSPLSPTSDYPGPLMSPSSGGPGPSLSPTRRSSPDPGFSGQAAFNYN
QLEGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGER
LPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQI
QDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDL
IDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSK
MKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLIGVQQ
QLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGKLISDINKAWERL
EKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEA
ATKKHEAIETDIAAYEERVQAVVAVAKELEAESYHDIKRITARKDNVIRLWEYLLELLKA
RRLRLELNLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGI
QVDRVRNVNSNAQRFATDSDGYKPCDPQIIRDRVAHLEFCYQELTQLAAERRARLEESRR
LWKFFWEMAEEEGWIKEKEQILSSEDYGKDLTGAVRLLSQHKAFEDEMSGRAAHLQQTIK
QGDELVADNHFGAEKIKERIRDIQEQWAALERLSAVRKARLQEAVNQHQFQADADDIDTW
MLDVLRIVSSVDVGHDEFSTQALVKKHKDVAEEIESYRPVIEALHDQARTLPPEKADSEE
VQSRLAGIEERYREVVELTRLRKQALQDALALYKMLSEARACELWIDEKEQWLNSMEIPE
KLEDLEVVQHRFESLEPEMNSQASRVAVVNQVARQLIHSGHPSEKEIKAQQDKLNTRWSQ
FRDLVDQKKENLNSALGVQNYHLECNETKSWIKEKTKVIESTQELGNDLAGVMALQRKLT
GMERDLVAIEDKLSDLGKEAERLASEHPEQSEAITGRLAEITGVWDEMKDSLKNREESLG
EASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLAQHEGIKNEVRNYEEDYQ
KMRDMGEMVTRGQTDAQHMFLRQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTK
QAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKISGVVDAGCRLVADG
NVNAERIQEKVDSIDQRRKKNRQAANDLLARLKDNRDLQKFLQDCQELSLWINEKMLTAQ
DMTYDEARNLHSKWLKHQAFMAELQSNKEWLDKIKKDGQTLMAEKPDTEAMVKEKLASLT
SMWDDLESTTQTKAKCLFDANKAELFTQSCADLDKWLTGLDGQLQSDDYGKDLTSVNILL
KKQQMLESQVEVRQKEVEELQRQSQALSQEGKGSDEVDGQRISVEHKFHTLQAPLQKRRD
NLMASREIHQFNRDVEDEILWVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQP
RYDDIFERSQHILREGSPTAELIRQRLADLQSLWEQIKKETEKRHSRLSEAHKAQQYYFD
AAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADAVHQLSSTSRGLVA
AGHPDSERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVV
AGSHELGQDYEHVTMLQERFREFARDTGTIGQERVDGVNRLADELINSGHGDAATIAEWK
DGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILNRILDKHKKLPEELGRDQNTVE
TLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGEVLEAWKNLLEAA
EGRRAKLADTGDKFRFFSMVRDLMLWMEDVIRLIEAQEKPRDVSSVELLMNNHQGIKAEI
DARNDSFTACIELGKALLARKHYASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVH
QFSRDAGVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHESFEKSAATWEERFSALERLT
TMELLEVRRRQEEEERKRQPAEAADAAAQHREGEPVSQNGLPSEQESPREAVDGADVVNG
VSGPSPSGSPGASRKGKPSQAATLPAKTQQDAPVPQMEGFLHRKHEWEGHNKKASNRSWH
NVYCVINHQEMGFYKDQKSAGQGIPYHSEIPVSLKDAVCEVAVDYKKKKHVFKLKITDGN
EYLFQAKDDEEMNTWISKISAAMAGEKSEVTPSGHSTPAPAPAARAQTLPASVAATAAAA
ATTTAAESSPGKREKDKEKRFSLFSKKK
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagcgccacgggtcccctgcccggatccctctcacccctctcgccgacc
tcggactacccgggccccctgatgtcgccgtcttcgggcggccccggcccgtccctcagc
cccacgcggaggtccagtcctgacccggggttctcgggacaggctgccttcaactacaac
cagctggagggtcggttcaaacagctccaagatgagcgcgaggcggtccagaagaagacc
ttcaccaagtgggtcaactcccacctgtccagagtctcctgcaggattacagacctctac
atggacctgagggacgggcgcatgctcatcaagctgctggaggtcctgtcaggagagcga
ctgcccaaacccacaaagggccggatgaggatccactgcttggagaacgtggacaaagcc
ctgcagttcctgaaggagcagagggtccacctggagaacatgggctcccacgacatcgtg
gacgggaaccaccggctgactctggggctcatctggaccatcatcctccgcttccagatt
caggacatcagcgtggagacggaggacaacaaggagaagaagtcggccaaagatgctctg
ctgctctggtgtcagatgaaaactgcagggtatccaaacgtcaacatccacaacttcacc
accagctggagagacggcatggccttcaacgccctgatccacaaacacaggcccgacctg
atcgacttcgacaagctgaagaagtccaacgctcactacaacctgcagaatgccttcaac
ctggccgagcagcacctcggcctcaccaagctgctggaccctgaagacatcagcgtggac
caccctgacgagaagtccatcatcacctacgtggtcacctactaccactacttctccaag
atgaaggcgctgaaggtggaggggaagcgaatcggaaaggtgctggacaacgccatcgag
acggagaagatgatcgagaagtacgagtccctggcgtccgacctgctggagtggatcgag
cagaccatcatcatcctcaacaacaggaagttcgccaactctctgatcggcgtccagcag
cagctgcaggccttcaacacctaccgcaccgtggagaagccgccaaagttcacggagaag
ggcaacctggaggtcctcctgttcaccatccagagtaagatgcgcgcaaacaatcagaag
gtctacacgcctcgggaggggaaactcatctccgacatcaacaaggcgtgggagcgcctg
gagaaggcggagcacgagcgggagctggcgctgaggaccgagctgattcgccaggagaag
ctagagcagctcgctcggcgatttgaccgcaaagccgccatgagggagacttggctgagc
gagaaccagaggctggtctcgcaggataactttggattcgacctgcaggctgtcgaagcc
gccacaaagaaacacgaagccatagaaacggacatagccgcctacgaggagcgagtccag
gctgtggtcgccgtggcgaaggagctggaggcggagagctaccacgacatcaagcgcatc
acggccaggaaggacaacgtgatccggctgtgggagtacctgctggagctgctgaaggcg
cgcagactgaggctggagctgaacctgggcctgcagagggtcttccaggagatgctctac
atcatggactggatggacgagatgaagatgctgctgctctctcaggactacgggaagcac
ctgctgggcgtggaggacctgctgcagaagcacgcgctggtggaggccgacatcggcatc
caggtggaccgggtccgcaacgtcaacagcaacgcgcagagattcgccaccgacagcgac
ggttacaaaccctgcgaccctcagatcatccgggaccgcgtggcgcacctggagttctgc
tatcaagagctgacccagctggcggccgagcggcgggctcgcctcgaggagtcccgccgc
ctctggaagttcttctgggagatggcggaggaggagggatggatcaaagagaaggagcag
atcctctcctccgaggattatgggaaggatctgacgggcgccgtgcggctgctgagtcag
cacaaggccttcgaggacgagatgagcgggcgagccgcccacctgcagcagaccatcaag
cagggcgacgagctggtggcagacaaccacttcggagccgagaagatcaaggagcgaatc
cgggacatccaggagcagtgggcggctctggagcgcctctccgccgttcggaaggctcgt
cttcaggaggcggttaaccagcaccagttccaggctgacgccgacgacatcgacacctgg
atgctggacgtcctgcgcatcgtttccagcgtcgacgtcggccacgacgagttctccacg
caggctctggtgaagaagcacaaggacgtcgccgaggagatcgagagctaccgccccgtc
atcgaggccctgcacgaccaggcccggacgctgccgccggagaaggccgactccgaggag
gttcagagccggctggcgggcatcgaggagcgctacagggaggtggtggagctgacgcgg
ctccggaagcaggccctgcaggacgccctggcgctctacaagatgctgagcgaagcccgc
gcctgcgagctgtggatcgacgagaaggagcagtggctcaacagcatggaaatcccagag
aaactggaggacctggaggtggtccagcaccggttcgagagtctggagccggagatgaac
agccaggcgtcccgggtggccgtggtcaaccaggtggctcggcagctaatccacagcgga
catcccagcgagaaggagatcaaagcccagcaggacaagctcaacaccaggtggagtcag
ttcagggacctggtggaccagaagaaggagaacctgaactccgctctgggggtccagaac
taccacctggagtgcaacgagaccaagtcctggattaaagagaagaccaaggtgatcgag
tccacccaggagctgggcaacgacctggccggcgtcatggccctgcagagaaagctgacc
ggcatggagcgcgacctggtggccatcgaggacaagctgagcgacctgggcaaggaggcg
gagcggctggcgtcggagcacccggagcagtccgaggccatcacaggacgtctggcggag
atcacgggcgtctgggacgagatgaaggactcgctgaagaaccgcgaggagtccctgggc
gaggccagcaagctgcagcagttcctgcgcgacctggacgacttccagtcgtggctgtcg
cgcacgcagaccgccatcgcctccgaggacatgccgaacacgctggccgaggccgagaag
ctgctggcccagcacgagggcatcaagaacgaggtgcgcaactacgaggaggactaccag
aagatgcgcgacatgggcgagatggtgacgcggggccagacggacgcgcagcacatgttc
ctgcggcagcggctgcaggcgctcgacaccggctggaacgagctgcacaagatgtgggag
aaccgccagagcctgctgtcccagtcccacgcctaccagctgttcctgagggacaccaag
caggccgaggccttcctcaacaaccaggagtacgtcctggcccacacggagatgcccacc
accctggagggggcggaggctgccatcaagaagcaggaggacttcatgaccaccatggac
gccaacgaggagaagatcagtggcgtggtcgacgccgggtgccgcctggtcgcggacggc
aacgtcaacgccgagcgcatccaggagaaggtggactccatcgaccagaggcgcaagaag
aaccgacaggctgccaacgacctgctagcgaggctgaaggacaacagggacctgcagaag
ttcctgcaggactgccaggagctgtccctgtggatcaacgagaagatgctgacagcccag
gacatgacgtacgacgaggcccggaacctgcacagcaagtggctcaaacaccaggccttc
atggccgagctgcagtccaacaaggagtggctggacaagatcaaaaaggacggccagacg
ctgatggcagagaagccggacacggaggccatggtgaaagagaagctggcgtccctgacg
tcgatgtgggacgacctggagtcgaccacgcagaccaaagccaagtgtctgttcgacgcc
aacaaggccgagctgttcacgcagagctgcgcggacctggacaagtggctgacgggcctg
gacgggcagctgcagtccgacgactacggcaaagatctcacctccgtcaacatcctgctg
aagaagcagcagatgctggagagccaggtggaggtgcgtcagaaggaggtggaggagctg
cagcggcagtcgcaggccctcagccaggaggggaagggctccgacgaggtggacggccag
aggatcagtgtggagcacaagttccacaccctccaggccccgctgcagaagaggcgggac
aacctgatggcctcgcgcgagatccaccagttcaacagggacgtggaggacgagatcctg
tgggtggaggagaggatgcccctggccacgtccacggaccacggacacaacctgcagacc
gtccagctgctcatcaagaagaaccagacgctgcagaaggagatccagggccaccagcct
cgatacgacgacatcttcgagcgcagccagcacatcctgagggagggcagccccacggcg
gagctgatccgccagcggctcgccgacctccagtccctgtgggagcagatcaagaaggag
acggagaaacgccactctcgcctgagcgaggcccacaaggcccagcagtattactttgac
gctgccgaggccgaggcctggatgagcgagcaggagctctacatgatgtcagaggagaag
gccaaggacgagcagagctcagtggccatgctgaagaagcatcagatcctggagcaggcg
gtggaggactacgccgacgccgtccaccagctgtcgagcacgagccgcggcctggtggct
gccggacaccccgacagcgagcgcatcggcatgcgtcagtctcaggtggacaagctgtac
gcgggcctcaaggacctgtcggaggagcgccgggggaagctggacgagcgcttccgcctc
ttccagctcaaccgggaggtggacgacttggagcagtggatcgccgagagggaggtggtg
gccgggtcccacgagctgggacaggactacgagcacgtcaccatgctgcaggagcgtttc
agagaatttgcccgcgacacgggaaccatcgggcaggagcgcgtggacggcgtcaaccgg
ctggccgacgagctgatcaactcgggccacggcgacgccgccaccatcgccgagtggaag
gacggcctgaacgaggcgtgggccgacctgctggagctcatcgacacccgcacgcagatc
ctcgccgcctcctacgagctccacaagttctaccacgacgccaaggagatcctcaaccgc
atcctggacaagcacaagaagctcccggaggagctgggccgcgaccagaacacggtggag
accctgcagaggatgcacaccaccttcgagcacgacattcaggctctgggaacgcaggtg
cgccagcttcaagaggacgccgtccgcctgcagtcggcctacgcaggagacaaagccgac
gacattcagaagagagaaggcgaggtcctggaggcctggaagaacctgctggaggcggcg
gagggtcggcgggcgaagctggccgacaccggagacaagttccgcttcttcagcatggtg
cgcgacctgatgctgtggatggaggacgtgatccggctgatcgaggcccaggagaagccc
agagacgtgtcgtcggtggagctgctgatgaacaaccaccagggcatcaaggcggagatc
gacgctcgcaacgacagcttcacggcctgcatcgagctggggaaagccctgctggcccgg
aaacactacgcttcggaggagatcaaagaaaagttgttacagttgacggacaagaggaaa
gagatgatcgacaagtgggaggacagatgggagtggctccgactggtcctggaggtgcac
cagttctcgcgggacgccggcgtggccgaggcgtggctgctgggccaggagccgtacctg
tccagcagggagatcgggcagagcgtggacgaggtggagaagctcatcaagcgccacgag
tccttcgagaagtcggccgccacctgggaggagcgcttctcggcgctggagaggctgacc
acgatggagttactggaagtgagaagaaggcaagaggaggaagagaggaagaggcaacca
gcggaggctgccgacgctgcggctcagcacagagagggcgagccggtgtcccagaacggg
ctgccatccgagcaggagtctcccagggaggccgtcgacggcgccgacgtggtgaacggc
gtgtcggggcccagtccgtcggggtctcccggggcgtcgcggaagggcaagcccagccag
gcggcgaccctgccggctaaaacccaacaggacgccccggtgcctcagatggagggcttc
ctgcaccgcaagcacgagtgggagggccacaacaagaaggcgtccaacaggtcgtggcac
aacgtgtactgcgtgatcaaccaccaggagatgggcttctacaaggaccagaagagcgcc
ggtcagggcatcccctaccacagcgagatccccgtcagcctgaaggacgccgtatgcgag
gtggctgtggattacaagaagaagaagcacgtctttaagctcaagatcaccgacggcaac
gagtatctcttccaagccaaagatgatgaggagatgaacacctggatctccaagatctcc
gccgccatggcgggtgagaagtcagaggtgactcccagcggccacagcacgccggccccc
gcgcccgccgcccgcgctcagacgctgccggcctccgtggcagcaacggcggcagcggcg
gcgaccacgacggccgccgagtcgagccccggcaaacgagagaaggacaaggagaaacgc
ttcagtctgttcagcaagaagaaatag
DBGET
integrated database retrieval system
