Kryptolebias marmoratus (mangrove rivulus): 108247405
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Entry
108247405 CDS
T05608
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108247405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108247405
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108247405
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
zf-C3HC4_3
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108247405
NCBI-ProteinID:
XP_024866187
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All DBs
Position
LG22:complement(8667389..8722846)
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AA seq
594 aa
AA seq
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MSAYTVTLPGPGPWGFRLQGGKDFNMPLTISRITPGSKAAQGNLIQGDVIVAIDGVSTEG
MTHLDAQNKIKMANYNLALTMAKSKRPAPMAPPRMDAIPLIPHHQSAQVNGRPLASSEPV
ESGSPGRRAAAVSPRQRKQYNSPIGLYSEETLREMAAMQAGQPVGSVPGKDRLVDSASPV
YQAVQSVDKDQDLNEWGLRSTSAQSKSFQILAHMTQAESSLKQQQEEEVMRRSSPYGPPP
PMHQAPPPQHYQPIPQQYQQPPTHQAPPTQQSSIQIPVGSGPPKVVSTACIYPSQPVPAP
APAPVPTHPRPPAAAAAAPGPHLAGPAMSNRPPWVTDTNFADKFDPSKITTTSTSMKVQP
LPQAAPPPPAYIPNPSPAGPPAPSPAPINPSPAPFPPVARGVAQRAERFAASSRTPLCGA
CNSVIRGPFLVALGRSWHPEEFNCHYCHVSLADVSFVEEQNNVYCENCYEEFFAPTCARC
NTKIMGEVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCD
FPVEAGDKFIEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctacaccgttactctgccgggccctgggccctggggcttcaggctgcagggg
gggaaggacttcaacatgcctctgaccatctccaggattactccgggcagcaaagcggcg
cagggtaaccttatccagggtgatgtcattgttgccattgacggcgtcagcactgaagga
atgactcacctggacgcccagaacaaaatcaagatggcaaattacaacctggcgctcacc
atggccaagtcgaagcgtcccgctccgatggcaccaccaaggatggatgccattccattg
atcccacatcaccagtcagcgcaggtaaatggccgcccattggcctcgtctgagcctgta
gagtcaggctctcctgggaggagagctgcagccgtcagcccacgccagaggaagcagtat
aactcccccatcggcctgtactcagaggagactctgagggagatggcagcaatgcaggcg
ggtcagcctgtgggttcagttccaggtaaagaccggctggtggacagcgcctccccggtc
tatcaggccgttcagagcgtagacaaggaccaggacctgaatgagtggggcctccgcagc
accagtgcacagtccaaatccttccagatcctggcccacatgacacaggccgagtcctct
ctgaagcagcagcaggaggaggaggtgatgaggaggagcagcccatatggaccaccccca
cctatgcatcaggctccacccccacagcactaccagccaatcccacagcagtaccagcaa
ccacccacacatcaagccccgcccactcagcagagctccattcagataccagttggatct
ggtcctcctaaagttgtcagcaccgcctgcatctacccctcccagccagttccagctccg
gctccagctccagtcccgacccatccccgccctccagccgccgctgccgctgccccgggc
ccccatcttgctggtcctgccatgtccaacagaccgccctgggtgaccgacaccaacttc
gctgataagttcgaccccagtaagatcaccacgaccagcacctccatgaaggtgcagccg
ctgccccaagctgcccctcccccaccggcatacatccccaacccttcccccgcggggcct
cctgccccaagtcctgcccctatcaatccaagccccgcccctttccctcctgtagcgagg
ggcgtagcccaaagggcggagagattcgccgccagcagtcgtacacctctgtgtggggcg
tgtaacagcgtcatcaggggccccttcctagtggccctcggacggtcctggcaccccgag
gagtttaactgccactactgccatgtttctctggcggacgtcagcttcgtggaggagcag
aacaacgtctactgcgagaactgctacgaggagttcttcgctccgacctgcgctcgctgc
aacaccaagatcatgggggaagtgatgcacgctctgcggcagacgtggcacaccacctgc
tttgtgtgcgcggcctgcggcaaaccctttggaaacagcctcttccacatggaggacgga
gagccgtactgtgagaaagattacatcgctctcttcagcaccaagtgtcacggctgcgac
ttcccggtggaagccggggacaagttcatcgaggccctgggccacacctggcacgacacc
tgcttcgtctgcgcggtctgccacgtgaacctggagggtcagcccttctactcgaagaaa
gacaagcccctgtgcaagaagcacgcccatgccatcaacgtgtga
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