Kryptolebias marmoratus (mangrove rivulus): 108247429
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Entry
108247429 CDS
T05608
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108247429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108247429
03036 Chromosome and associated proteins [BR:
kmr03036
]
108247429
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108247429
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108247429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108247429
NCBI-ProteinID:
XP_017291035
UniProt:
A0A3Q2ZWV0
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All DBs
Position
LG13:complement(15876648..15915012)
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AA seq
1905 aa
AA seq
DB search
MSAISSSSSKLNVLVNRLHEYLAHSNAEDDHEALTSEDSNDRTNKSCAVGNSLGHTAAEA
GLDSRYSRRKPSVVIKHSGLDESGDSNASEDLPVSSNGHIDAARLPKGTVLVRPEPVDII
RDDFRGPEFRSRKPNVLRKEFSRRRGGEQHVGIVCCTACGRQVNHFRKDSLYRHPVLKVL
ICKACHNYYSSDDISKDGDGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLGRKELSG
ILESKWYCYVCSPEPLFDLVMACDSVLENIDRLWCQQRKRSRVEPGKPELYHMSPHLPQN
ISLDKWDHSGMDGNVVFNYNTLQVSKDITKKAKHLVDSTNALNKAFLSLIQKVTTNKQTQ
GVRILYLNSFVAVVKGLRKSLTALEDNLKEEFGDLDVLSGWEKMLSNDIGAAVTGGDVEL
DISDERSLRDLQKLATEHFEDNDSDSKGYIVPAAPTACPGKSMDADLKEAICRAQKIGLN
PSATQADMIKKLVVQLTPVAMEQEPSSDAPKVEEDFQKKEKKAKVEHASEAEEAGALSPK
ADSNVSSDGSSAPLFQEEEQGNRRSPRVKTTPLRRPSDVKTKTPLSAGDSDSDSEPEGTP
GTEAATNNQNQNLIREGDDSDSDEVPAALLERAAMTQSSDEPQSDKEGDEASPNKVTKKC
LFWLTKNSLMSPEKMRRKRKMLDRSSESESSSRLIGVQQESETDSSSDDQDSQKKIQHLN
TVRSIGKPHLVKREEEGAARKQRRLQAGKSKAEPRQDASDSSSSLSDDEQDDDSGSDGSI
QKMKPITENVASLGVAAFHQSSGDEEQSGPSWAADDDDDPENRIAKKMLLAQIKANYSSD
GDISSDEDTQEGESESEADEEDKRADGENGPNENGGEMTSDSSDSPSDDPKLRHHLLRHK
LTLDEGTASDGQEAENEAGQQENDRKAKRKQTFSDSESSATGCDDSAGWEMSEELSESED
EAAEDELESFSSDTNEDRDTSSQKQKEQVQYILLSDTSSDKSNVSNGEDNGELKSTPKGR
KKIRKIIEDEDLRAETQEALREEEERRKRLANRDQQMEERREITVIEDEQSPITTKLVLD
QDEETKMPLVQVHKNLLTRLKPHQVDGVQFIWDSCCESVKKANSSPGSGCILAHCMGLGK
TLQVVAFLHTVLLSPNLNFRTALVICPLNTVLNWVSEFKKWQEDIRDNKVKVAELATVKS
PLHRLGALQKWQRNGGVLIMGYDMYRNLSKDCTIDSQEAKKLLKSTLVDPGPDFVVCDEG
HILRNEASRISKAMNTIRTQRRLVLTGTPLQNNLVEYHCMVSFIKKNLLGSLSEFRNRFI
NPIQNGQCADSTPKDVRVMKKRAHVLHEMLAGCVQRRDYSELSQFLPPKHEYVLAVRVTP
LQYKLYRHYLDHVSVGERETDRTKLRAGANLFKDFQVLGRIWTHPWCLQLQENKRYLNKK
NQVKAASQLMNVFTIVPERLKEDEGKEENGSENGAVDAPTDDPEAKGGSSASSLSPPSPT
KGWFKSLLSESDAKILEHSGKMVLLFKILQMAEDLRDKVLVFSQCLISLDLIEDFLKASH
QARDPSKSVKEGSWIKNVDYYRLDGSTSALFRKKWAEEFNKASNVRGRLFLISTRAGSLG
INLVAANRVVIFDASWNPSYDIQSIYRVYRFGQLKQVFVYRFLAQGTMEEKIYDRQVTKQ
SLSSRVVDRQQIERHFTLNELTELYTFEPDLLDDPNSKKSKRPTPILPKDSVLAQLLQTC
KDQIVSYHEHESLLDHKQEEELSEAERKAAWAEYEAESNPASLPVSTTQDSLDKETNEKL
LDLLNKSRAQVSSAFMTLQKMRTYSLEDYRQRLQQQYPLLPELELQVKAQHWKKCDDKRR
DVVQAFYREALAQQQSLTLRIPAILNRRRNTVAPAAVETNQPAQT
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaataagctcctcttccagcaagctgaacgtgttggtcaacaggcttcatgaa
tacttggcccattccaacgccgaggacgaccatgaggctctaacatccgaggactccaac
gatcggacaaacaaaagctgcgctgtgggaaactcattaggccacactgctgcagaggca
ggcctggacagtcggtactccaggaggaaaccctcggttgtcataaagcactcggggctg
gatgaatctggagactcaaatgcaagcgaggacctaccagtcagttcaaacggtcacatt
gatgctgctagattgcctaaagggacggtgctggtcagaccggaaccagtggacatcata
agagatgacttcagaggtccagagtttcgcagccggaaacccaacgttttgcggaaggag
ttttcaaggagacgtggaggagagcaacatgtgggaattgtgtgttgcactgcgtgcggc
cgacaggttaaccacttccggaaggattccctttatcggcatccggttctgaaagtgctg
atttgcaaggcttgtcacaattattattcaagcgacgacatcagcaaggatggagatggg
atggacgagcagtgcaggtggtgtgctgaaggtggaaacctaatctgttgcgactactgc
agcaacgctttctgcaagaaatgcattctgaggaacctgggaaggaaggaactgtccggc
atcctggagagcaagtggtactgttatgtgtgcagtccagagcccctctttgacctggtg
atggcgtgcgacagcgtcctggagaacatagaccgcctgtggtgtcagcagcgcaagagg
agccgggtcgagccgggtaaacctgagctgtaccacatgtcgccgcacctgccgcagaac
atttctttggacaaatgggatcacagtgggatggatgggaacgtggtcttcaactacaac
accctgcaggtttccaaggacattaccaaaaaggccaaacatctggtggactcgacaaat
gccttaaacaaagcgtttctcagcctcattcagaaagtgacgacaaacaaacaaactcag
ggggttcgcatcttgtatttgaactcttttgtggctgtcgttaaaggcttgcggaagtct
ctcacagccctggaggacaacttaaaggaggaatttggtgacttggatgtgctaagcggc
tgggaaaagatgcttagtaatgatattggtgctgctgtaacaggaggagacgttgagctg
gacatctcggacgaaaggtccttgcgcgacttgcagaaactggcaacggagcattttgaa
gataatgattctgattccaagggatacatagtccctgcagctccaactgcctgccctggg
aagagcatggatgcagatttgaaagaagctatatgcagagcacaaaagattggcctgaac
ccttctgcaacccaagccgacatgattaagaaactggtagtgcagctcacgcctgtagcc
atggagcaggagccgtcttcggacgctccaaaggtagaggaggatttccagaagaaggaa
aaaaaagctaaggtcgaacatgcatcagaagctgaagaagctggtgctttaagtcctaaa
gctgacagcaatgtgagcagtgacggctccagtgctcctctcttccaagaggaggaacaa
ggcaatcggcggtctcctcgggtgaagacgactcctcttcgccgaccaagtgacgtcaag
accaaaactcccctctcggcaggggacagcgacagcgactctgagcccgaggggacgcca
ggcacagaagcagcaacaaacaaccaaaaccaaaatctgatcagagaaggagacgattcc
gactcggatgaagtccctgccgctttgctcgagcgagcggccatgacgcagagctcggac
gagccccagagcgacaaggaaggggatgaagcgtcgccgaacaaggtcaccaagaagtgc
ctgttctggctcaccaagaacagcctgatgtcaccggagaagatgcggcggaagcgcaag
atgctggaccgctcctctgagtccgagtcgagcagcaggctcatcggcgttcagcaggag
agtgagacagattcctccagcgatgaccaagactcccagaagaaaatccaacacttgaac
actgtgaggtcgatagggaagcctcaccttgtcaaaagagaagaggaaggtgcggcgagg
aagcagagaagactgcaagctggcaagtccaaagcagaacctcgtcaggacgcgagtgat
tcatcgtcctcgttaagtgacgacgagcaagatgacgactcagggagtgatggaagcatt
cagaagatgaagccaatcacagaaaacgtggcctcgctcggagtggcagccttccaccaa
tcatcaggggacgaggagcagtcggggccctcatgggcagcagatgatgatgatgatccc
gaaaatagaatcgctaagaaaatgctgttggcccaaattaaagccaactactcgtcggac
ggtgacatttcctcggatgaagacacacaggagggtgaatcagagtcagaagctgatgag
gaggacaaacgagccgatggggaaaacggcccgaacgaaaacggaggggagatgacctct
gactcgtccgacagcccgtccgacgaccccaagctcaggcaccatctcctccgccacaag
ctcacgttagacgaggggacggcgagcgacgggcaggaggctgagaacgaggcaggacag
caggagaatgacaggaaagccaagaggaaacagacgttctctgatagcgaaagcagcgcc
acgggctgcgacgacagtgcaggttgggaaatgagcgaggagctgagcgagtccgaggat
gaggctgctgaggatgaactggagagcttcagttcggacacaaatgaagacagagacact
tctagtcagaaacagaaggaacaagtgcagtacattctgctgtctgacaccagcagtgac
aagagtaacgtttcaaacggcgaggacaacggcgaactcaagagcactccgaagggccgc
aagaagatccgcaaaatcatcgaggacgaggacctgcgggccgagacccaggaagccctc
agagaggaggaggagagacgcaagcgcttggcaaaccgagaccagcagatggaggaaagg
agggagataactgtgatagaggacgagcagtctcccatcactaccaagctggtcctggat
caggatgaagagaccaagatgccccttgttcaggtgcacaagaacctgcttacaagactg
aagcctcaccaggtggacggtgtccagtttatttgggacagctgttgtgagtctgtgaag
aaggccaactcctcccccgggtcaggctgtatactggcacactgcatggggctggggaag
actctgcaggtggtagcgttccttcacaccgtgctgctttcaccaaacctgaacttcaga
acagccttggtcatttgtcctcttaataccgtcctgaactgggtcagtgagttcaagaaa
tggcaagaggacattagagataataaagtcaaggttgcagagctggctacggtaaagtct
cccctgcaccgactcggagctctgcagaagtggcagaggaacggaggcgtgctgatcatg
ggctatgacatgtaccgcaacctgtctaaggactgtaccattgacagccaagaggcgaag
aaactgctgaagagcacattagtggatccaggtccagactttgtggtttgtgacgaggga
cacatccttcgcaacgaagcctccaggatctccaaagccatgaacaccatcaggacccag
aggagactggtgctgacgggtacaccccttcagaacaacctcgtcgagtaccactgcatg
gtgagcttcatcaagaagaatctgctgggctctctgagcgaatttcgaaaccgcttcatc
aaccccatacagaacggccagtgcgccgactccacccccaaagatgtcagggtcatgaag
aagcgagcgcacgtgctccacgaaatgttggctggatgcgtgcagagaagagattactcc
gagttgagccagtttctgcctcccaaacacgaatatgtgctggcagtgagggtgaccccc
cttcagtataaattataccgccactacctcgaccatgtctcagtcggggaacgtgaaacc
gacagaaccaagctgagggccggcgccaacctcttcaaggatttccaggtcctcgggcga
atttggactcatccgtggtgccttcagctgcaagaaaacaagagatatttgaacaagaag
aatcaggttaaggcagcatctcagctgatgaatgtatttaccattgtgcccgagagactc
aaagaagatgaaggaaaagaagagaacggcagtgaaaacggcgccgtcgacgcccccaca
gacgacccagaggcgaaaggagggagttcagcgagcagcttgagtcctccgagtccgacg
aagggctggttcaagagtctgctgtctgaaagcgacgctaagatcctggagcactcgggg
aaaatggtgcttttattcaagatccttcaaatggccgaggacctgcgggataaagtgctc
gtattcagtcagtgtttgatctcgttggacctgattgaggatttcctcaaagcttctcac
caagccagagacccgtcaaaatcagtcaaagagggcagctggatcaaaaatgtggactac
tatcggctcgacggctccaccagtgctttgttcaggaagaaatgggcagaggagttcaac
aaagcttccaatgttcgcggcaggctgtttctcatctcaactcgagccggctcactcggc
atcaacctggtggccgctaacagagtcgtcatcttcgacgcgtcgtggaatccctcgtac
gacatacagagcatttaccgagtgtatcgcttcggtcagctcaaacaggtgtttgtgtac
cgcttcttggctcagggcaccatggaggagaagatctatgaccggcaggtgaccaaacag
tctctgtcctcccgagtggtggatcggcagcagatcgagaggcacttcactctgaacgag
ctgaccgaactctacacgtttgagccagacctgctcgatgacccaaactctaagaaaagc
aagcgacccaccccgattctaccaaaggacagtgtcctagcacagctgctgcagacctgt
aaggaccagatagtgtcctaccacgagcacgagtccctgctggaccacaaacaggaggag
gagctcagcgaggcggagcgcaaagctgcgtgggccgagtacgaagccgagtcaaaccca
gccagcctcccagtcagcaccacccaggactctttggataaggagaccaacgagaagcta
ctggatctgctgaacaaaagcagagcgcaggtatcatcggccttcatgaccctgcagaag
atgaggacttactcgctcgaggactacaggcagcgactgcagcagcagtaccccctcctg
cctgagctcgagctgcaggtgaaggctcagcactggaaaaagtgcgacgacaagaggcgg
gacgtcgtgcaggccttttatcgggaagctctggcgcagcagcaatcactcacgctccga
attccggccatcctgaaccggcgaaggaacactgtggcgcccgctgccgtcgagacaaac
cagcccgctcagacttga
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