Kryptolebias marmoratus (mangrove rivulus): 108247479
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Entry
108247479 CDS
T05608
Symbol
wipi1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1 isoform X1
KO
K17908
autophagy-related protein 18
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04136
Autophagy - other
kmr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108247479 (wipi1)
04136 Autophagy - other
108247479 (wipi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108247479 (wipi1)
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108247479 (wipi1)
Membrane trafficking [BR:
kmr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
108247479 (wipi1)
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108247479 (wipi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_RSE1_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
Beta-prop_WDR19_1st
CPSF_A
WDR55
CFAP43_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
RMC1_N
Motif
Other DBs
NCBI-GeneID:
108247479
NCBI-ProteinID:
XP_037834691
LinkDB
All DBs
Position
LG12:19021550..19084010
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AA seq
458 aa
AA seq
DB search
MDMAEGSGTANSVDKPGPRRVGCASFNQDSTSLALGTWSGYKLFSLTMVEKLDCLHDSAN
PPDVFIVERLFSSSLVVVVSAATPQCMNIYHFKKGTEICNYSYPNSILAVKLNRQRLVVC
LEGSIYIHNIKDMKLLKTLLNTASNPSGLCALSVNHSNSFLAYPGSVTFGEIIVHDTNSL
SIVTMIPAHDSPLAALAFNASATKLASASERGTVIRVFSVPEGQRLFEFRRGMKRYVNIS
SLSFSPDGHFLCASSNTETVHIFKLEQLGPSGEDDAATWTAYVGKMFSAASSYLPVQVSG
MMSQDRAFATAHLLSSGPRNVCTLVTIQELPRLLVATADGQLFIYNVDPQNGGECTLAYT
HRLIGVDDNQREGPESEGSQVTVQVQSSPSYAETAALPASGPVTAILTGYSEDGGAKNGE
VIPEHEFATGPVCLDDENEFPPIDSCRSGAGGGQGKSV
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcagaaggttcgggtaccgccaatagcgtggacaaaccgggaccccggcgg
gttggctgtgcctctttcaatcaggactccacgtctttggctttgggaacctggagtggc
tacaagcttttttctctgaccatggtggaaaaactggactgcctccatgatagtgcaaac
cctccagatgttttcatcgtggagcgtctgttctccagcagtctggtagttgtggtgagc
gctgccacgccgcaatgcatgaacatctatcacttcaagaaaggaacagagatctgcaac
tacagctaccccaacagcatcctagctgtcaaactcaacagacagaggctagtggtgtgc
cttgaagggtcaatttatattcacaacattaaagacatgaagctgctcaagactctgctc
aacactgcgtccaacccctcaggtctctgcgctctgtctgtcaatcattccaactcgttt
ctggcataccctggcagtgttacttttggggagatcatagtgcatgacaccaacagtctg
agcatagtgaccatgatcccagcccatgatagtcctctagcagctttagccttcaatgca
tctgccaccaaacttgcaagtgcctcagagaggggcactgtcatccgagtcttctccgtt
cccgagggtcagcgtctgtttgaatttcgcagaggcatgaagaggtatgtcaatattagc
tctttatccttcagtcctgatggacacttcctctgtgcttccagcaacacagaaactgtt
catatctttaaactggaacaactgggaccaagtggtgaggacgatgctgccacctggaca
gcctatgtggggaagatgttctcagcagccagcagctacctccctgttcaggtgtctggc
atgatgagccaggaccgggcttttgccaccgctcaccttctctcgtctggtccgaggaat
gtttgcaccctcgtcaccatccaggagcttccgcggttactagtagccacagcggatggc
caactgttcatttataatgtggatccacagaatggaggcgagtgcacgttggcttacacg
cacaggcttattggtgttgatgataaccaaagagaaggaccagagtcagaggggtcacag
gtcacagtccaagttcagtcatctccatcttatgctgaaactgccgccttaccagcctct
ggtcctgtcacagcaatcctcactggctactctgaagatggtggggcaaaaaacggcgaa
gtcattccagagcatgagtttgccactggacctgtgtgtctggatgacgagaacgagttt
cctcctattgactcatgccgctctggggctggaggtggccagggaaagagtgtgtga
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