Kryptolebias marmoratus (mangrove rivulus): 108247506
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Entry
108247506 CDS
T05608
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21-like
KO
K12015
tripartite motif-containing protein 39 / bloodthirsty-related gene family protein [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108247506
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108247506
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108247506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_2
U-box
NOMO1-like_1st
DUF1513
TRAF3_RING
zf-UBR
BRO1
FapA
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
108247506
NCBI-ProteinID:
XP_017291163
UniProt:
A0A3Q3A1P5
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All DBs
Position
LG6:complement(30362576..30399209)
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AA seq
594 aa
AA seq
DB search
MALPAACLSEDQFTCSICLEVFNNPVSTPCGHSFCQSCICSYWDGGGGGRGAKSYQCPLC
KESFQKRPELHINRTLKEITEQFKQMANSSLPTSEGVMGREPPNVQPLPNLSAPPRRGDM
PESIFVEMVARFQQLNPTGMPHFSSTESQNYFFQTQNNGGLDPPPPYSTSNSVGSPADVP
SNLPLCPIHLRGLEFFCRTDNMCVCSACTETTEHRGHNIVSANREWQIKKSQVGFTELEL
KDLITDRERKLEEIQNSILEIRAAAERETDKAVCAFSKLISSLEHCQGKVLEGIEMSHRA
AESRAQSLLRELEEEIAALKKKSSTLNQLAESEDYVIFLKMFPTVSTLPQVKDWSSVSVS
SQLSSGAILRSVNHMMEHLQEEMQKLTEVCQRSSPAQPVPRPKPKVKRVQEYAADITLDP
STAHPRLLISPNGKQVHCSERHQLVPDNPERFDRVVCVLAHQGFSTGRHYWEVDVGGKTD
WDLGVASRSVNRKGKINVSPAHGYWFLSLRDRTDYAFRTDPSTSLTVNSRPSRIGIYVDC
DKGLVSFYNVEAKQLIFTFTDSFRDTIHPFFSPCTNKSGQNEAPLTICPVAVIE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcccgctgcctgtctgtctgaagaccagttcacctgctcaatctgtctagaa
gtgttcaacaacccagtctcaacaccatgtggtcacagtttctgtcagtcctgcatctgt
tcctattgggatggaggaggaggaggacggggtgcaaaatcttaccagtgtcccctgtgc
aaggagtccttccagaagcgtccagaactacacatcaaccgaactctgaaggaaattacc
gaacagttcaagcagatggccaactctagtttgccaacatcagaaggagtcatgggaagg
gagcctcctaatgtacaacctctcccaaatctgtctgcacctccaagaaggggggacatg
ccggagagtatttttgttgagatggtagctcgttttcagcagctaaacccaactggaatg
ccacatttcagttccactgaatcccaaaactacttctttcagactcagaacaatggaggc
cttgacccaccaccaccttactccacttccaacagtgtgggaagtccagctgatgtccca
tcaaacctccccctgtgtcccatccatctgagaggcctggagttcttctgccggactgat
aacatgtgtgtgtgcagcgcctgcacggagacaactgagcaccgaggacacaacattgtg
tctgccaacagagagtggcagatcaagaagtcccaggtaggattcacagagctggagctg
aaggatctcatcactgacagagagaggaaactggaagagatacagaactccattctagag
ataagggctgcagctgagagagaaacagacaaagctgtttgtgctttttccaagctgatc
tccagtctggagcactgccaaggcaaagtcttagagggaatagaaatgagtcatcgagca
gcagagagcagagctcaaagtttgttgagagagctggaggaggagatagctgccctaaag
aagaagagctccacactgaaccagctggctgaatctgaggactacgtaatctttctcaag
atgttccccaccgtgtctacactcccacaggttaaagactggtccagtgtctcagtgtca
tctcagctgagctcaggggcaatcctcaggagtgtcaatcatatgatggaacaccttcag
gaagagatgcaaaaactgacagaagtctgccaacgatcctcaccagctcagcctgttcca
cggcccaaaccaaaagttaaaagagttcaggaatatgcagctgacatcaccttggatccc
agcactgcccacccacgcctcctcatctcccccaatgggaagcaggtacactgcagtgag
cgccatcagctggtaccagacaacccagagcgctttgaccgggtggtctgtgtgttggcc
caccagggcttcagtacaggacgccattactgggaggtggatgttggaggaaagactgac
tgggatctgggagtggccagccggtccgttaatcgaaagggtaaaatcaatgtaagcccc
gctcatggctactggttcctaagtctgcgggatcggactgactacgccttccgaacagat
ccctcaaccagccttacagtcaacagcagaccctctcggattgggatctatgtggactgt
gataaaggcctggtgtcattctacaatgtggaggccaaacagctcatttttacattcaca
gatagttttcgagacaccatccacccattcttcagcccctgtactaataaatcaggacag
aacgaggctccgttaaccatttgcccagttgcagtgatagaatga
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