Kryptolebias marmoratus (mangrove rivulus): 108247598
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Entry
108247598 CDS
T05608
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108247598 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
108247598 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108247598 (thoc2)
03041 Spliceosome [BR:
kmr03041
]
108247598 (thoc2)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108247598 (thoc2)
Spliceosome [BR:
kmr03041
]
Complex C
Other components
EJC/TREX
108247598 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108247598 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
108247598
NCBI-ProteinID:
XP_017291353
LinkDB
All DBs
Position
LG13:complement(15479205..15506863)
Genome browser
AA seq
1562 aa
AA seq
DB search
MATLLLSGEWIKNWEKSGKHEFVQLCKNLTENTDHGSEIKDIQTALYELCWQVVQGNLKW
DLGANVLGDMMALKDDMASILADVFCILDLETSALEEKNKRDHYTQLVGACLCFVPEAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSNLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPITLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHNLIELEDLYVHLMPLDAAIIEEHKREISE
AKQIARKLVMVVLPSEKSEDKEKEKEKEEEKNEKPPDNQKLGLLEALLWIGDWHHAQSIM
DQMPSFYATSHKAIALALCQLIHLTVEPLYRRAGIPKGARGCVLQPLRNKRAPQPAESFE
DLRKDTFSMLCYLGPHLSHDAILFAKIVRLGKAFMKEYQTNNTHEVKDKLEILLSCFLSI
ADQVLLPSLSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYSGHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDALLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQISSKYDELKKAEKGNRQQQKA
HKYVAACEQVMTPVHEAVVSLHPSRVWDDIRPQFYATFWSLTMYDLAVPQTAYEREVNKL
KAQIKAIEENPETPLNKKKKEKERCTALQEKLLEEEKKQQEHVQRVLHRLKLEKDNWLLA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAVYEKECVNYPGFLTIFRATGFDGGNKVD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKSQKVHMVPENEFHHKEQPARSATPASQQNGPG
STGKPATSTSKTEEGASEDGDRGKDKSQGTSKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSVKEKKEKKEKTPGSTPETKAETRREKQRDEKAGKEERVTREGKEKTPKADRE
KVKLEDKSSKEDKAKAGNGEPVEPSREAVKESKSKEKGDRNAATGSLKSPNPRSESAESE
RDHKRRKLDSHSSPSHSSSVKDGSNELKETPSKHHTNLNSVARSKSREKEVEKKDAENAQ
GRAKEKKEEKDRKDRKRDHTVNDREASQENKRRKDENGTNSSKNSQSTSPSCDSPLSPEK
EKSKRSKSSSKEKAESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEDKKHHKSSDK
HR
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttttactctctggtgaatggatcaaaaactgggaaaaatcaggaaaacac
gagtttgtacaactctgcaaaaacctaacagagaacactgatcatggaagtgaaattaaa
gacatacagacggccctttatgagctctgctggcaagttgttcagggaaacctgaagtgg
gatcttggtgccaacgtccttggggatatgatggcactcaaagacgacatggcatcaatt
ttagcagatgtgttttgcatactggatttagaaactagtgcattggaagaaaaaaacaag
cgtgatcattacacccagttggtgggagcatgtttgtgttttgtacctgaagccatcctg
aaggagaggctggatccagaaacccttgaatccctcggcctgataaagcaagcccatcag
tttaatcaaaagattgtaaaaatcaagactaaactattttataagcagcagaagtttaac
ttgctgcgggaggagaacgagggctacgccaaattaatcactgagctcggccaggacttg
tcaggcaacatcaccagcaacctcgtcctggagagcataaagtccctcataggctgcttc
aacttagatcctaatcgtgttttggatataatcctggaggtgtatgagagtcgctctgac
caggatgagttcttcctgtccctcatcaagtcctacatgtgtgagccaatcaccctttgc
catattttgggcttcaagtttaagttttaccaggagccgaatgaggaaacccccaagtca
ctttaccacatcgcagctgctcttcttcatcataaccttatagagctggaggatctctat
gtgcacctaatgccactagatgccgccatcattgaagaacacaaacgagaaatttcagag
gccaagcagatcgcccgcaagcttgtcatggttgtgctgccctcagagaagagtgaagac
aaggagaaggagaaggaaaaggaagaagagaaaaacgagaagccacctgataaccagaaa
ctgggtcttttggaagctctgctctggatcggagactggcaccacgctcagagtattatg
gaccagatgccttctttttatgctacttctcataaggccattgctctggcgctctgccag
cttatccacctgactgtggagcctctttacagaagagctggcattcctaaaggggcccgg
ggctgcgtgctgcagccgctgaggaacaaacgggctcctcaacccgcggaaagcttcgag
gacctacgtaaggacacgttcagcatgctctgctacctgggccctcacctctcccatgac
gccattctctttgccaagattgtgcgattgggcaaggcctttatgaaagagtaccagaca
aataacacacatgaggtgaaagataagctggaaatcttgttgagttgtttcctgagcatt
gcagaccaggtacttctgccgtctctctcactgatggagtgtaatgcctgcatgtctgag
gaactgtggggtctcttcaaactctttccttaccaacacaggtaccggttatatggtcag
tggaagaatgagacgtattctggccatccattgttagttaaagtaaaagctcagaccgtg
gaaagggccaaatacattatgaagcgtttgaccaaagagaatgtaaaacagtcaggaagg
cagatcggcaagctgagccacagcaatcccaccatcctctttgactatatgctgtctcag
atccagtggtacgacaacctcattgttccagtggtggactctttgaaatacctcacgtcg
ctcaactatgatgtcctggcctattgcatcattgaagctctggccaaccccgagaaggag
aagatgaaacacgatgacactaccatctcctcgtggcttcaaagcctggctagtctgtgt
ggagccgtgttcagaaaatacccaattgagttggctggcctccttcagtatgttaccaat
cagttaaaagcagggaagagttttgacctgctgattctgaaagaggtggtgcagaaaatg
gccggcatcgagatcacagacgagatgacctcagaacagctagaggccatgacaggagga
gagcaactcaaagccgagggggggtacttcggccaaattaggaacacaaagaagtcttca
cagcgtctgaaggatgcacttctggaccacgaactcgccctgccgttgtgtttactcatg
gcccaacaacggaatggggtggttttcttggaggggggcgagaaacatcttaaacttgtc
gggcacctctacgaccagtgccatgacactctggtgcagttcggtggatttttagcttcc
aacctcagtacagaggattatatcaagcgtgttccttcgattgatatcctttgtaaccag
tttcacacgccacatgatgctgcgttcttcttgtctcgtccgatgtacgcccatcagatt
tcgtcaaagtacgatgagctgaaaaaggctgaaaagggcaaccggcagcagcagaaggca
cacaagtatgtggcggcctgtgagcaggtgatgacaccagtccacgaggctgtggtgtcc
ctccatccttccagggtgtgggatgatatccggcctcagttctacgccaccttctggtct
ctcaccatgtatgacttggccgtgccgcaaactgcgtacgagcgggaggtcaacaagctc
aaggcccagatcaaggccatcgaggagaaccctgagacgcccttaaataagaagaagaag
gagaaagaacgttgcaccgccctgcaggagaaactcctggaggaggagaagaagcagcag
gagcacgtccaaagagttctgcaccgcctcaaactggagaaagacaactggttgttggcc
aaatccacaaagaacgagacgataacgaagttcctgcagctctgtctgttccctcgctgc
atcttctcctccatcgatgccgtgtactgtgcccgctttgtcgagctggtccaccaacag
aaaacgcccaacttctgcactctcctctgctatgacagggtgttttctgccatcatttac
accgtggccagctgcacagagaacgagtcccatcgctacggacgcttcctctgctgcatg
ttggagacggtgacccggtggcacagcgatcgggcggtctacgagaaggagtgtgtgaat
tatcccggcttcctgaccatcttcagagccacaggcttcgatggagggaacaaagtagat
caactggattatgagaacttcaggcatgtggtgcataaatggcactacatgctgactaaa
gcttccgttcactgcctggagaccggagattacacccacatccggaacattctgatcgtg
cttaccaagatcctaccctgctaccctaaggtcctgaaccttggccaggcgctggagtgc
cgcgtccacaagatctgccttgaggagaaggataagagaccagacctctatgccttagca
atgggttattcaggtcgcttgaaaagccagaaggtgcacatggtccctgagaatgagttc
caccacaaggaacagccagcgcgtagtgccacgcctgctagtcagcagaacggacccggc
agcaccggcaagcccgccaccagcacaagcaagactgaggagggggcgtcagaggatggt
gatcgaggcaaggataaatctcaggggacctcaaagccagtgaacaaagccaacagtgca
gcagccaaagttaccaccagcaacggaaacggtgctctcaatagcaccaaagctgtgaaa
gagcgggacgacaaagagaagagtgttaaagagaaaaaagagaaaaaggagaagacacca
ggcagcactccggagacaaaggcagagacccgccgggagaagcagagagacgaaaaagca
gggaaggaggagcgggtgacgcgcgagggtaaggagaagaccccaaaggcagacagggag
aaagtgaagctagaggacaagagcagcaaagaagacaaggccaaagcaggaaacggagag
cccgtggaaccatccagggaggccgtcaaggagtccaagagcaaggagaaaggagacagg
aacgctgcgaccgggtccctcaagtcacctaatcccagatcagagtctgctgaatctgag
agggatcacaaaagacgaaagctcgacagtcactcttccccgtcccactcctcgtctgtt
aaggacggtagcaacgaactcaaggagaccccatccaagcaccacaccaatttaaattca
gttgcccggtccaagagcagagagaaggaagtggagaagaaagacgcagagaacgcacaa
ggccgagccaaagagaagaaggaagagaaggaccggaaggacaggaaaagggatcacacc
gttaatgaccgcgaggcgagccaagaaaacaagcgcagaaaggatgagaacggcaccaat
tcttctaaaaacagccagagcacaagtccttcttgtgactctccgctgtcacctgaaaag
gaaaaaagcaaaagatccaaatcttccagcaaagagaaggccgagtctgtgaaacccgag
cggacgtcctccggaggcaaaaaggagtccagacacgacaaagagaagtctgagaagaag
gagaagagggacagcagcggtgggaaggaggacaaaaagcatcataaatcgtctgacaag
cacagataa
DBGET
integrated database retrieval system
