Kryptolebias marmoratus (mangrove rivulus): 108247921
Help
Entry
108247921 CDS
T05608
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108247921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108247921
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108247921
03012 Translation factors [BR:
kmr03012
]
108247921
04131 Membrane trafficking [BR:
kmr04131
]
108247921
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108247921
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108247921
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108247921
Translation factors [BR:
kmr03012
]
Eukaryotic type
Elongation factors
108247921
Membrane trafficking [BR:
kmr04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108247921
Exosome [BR:
kmr04147
]
Exosomal proteins
Proteins found in most exosomes
108247921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
108247921
NCBI-ProteinID:
XP_017291829
LinkDB
All DBs
Position
LG5:complement(1497730..1501143)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEIQKEVSTYIKK
IGYNPAAVAFVPISGWHGDNMLESSDKMNWFKGWKIERKDGNASGTTLLEALDAILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPPNLTTEVKSVEMHHESLP
EAVPGDNVGFNVKNVSVKEIRRGYVAGDSKNDPPKAADSFNAQVIILNHPGQINEGYAPV
LDCHTAHIACKFKELIEKIDRRSGKKLEDNPKFVKSGDAAIVKLIPQKPMVVESFSSYPP
LGRFAVRDMRQTVAVGVIKAVDTKEISGKTTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccacctccaccggccacctgatctacaagtgcggagggatcgacaagcgaaccatcgag
aagttcgagaaggaggcggctgagatgggcaaaggctccttcaagtacgcctgggtgttg
gacaaactgaaggccgagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttt
gagaccagcaagtactacgtgaccatcatcgacgctcctggacacagggacttcatcaag
aacatgatcactggtacctcccaggctgactgcgccgtgctgatcgttgctgctggtgtc
ggtgagttcgaggccggtatctccaagaacggtcagacccgtgagcacgccctcttggct
ttcacccttggtgtgaagcagctcatcgttggagtaaacaagatggactccaccgagccc
ccttacagccaggcccgttttgaggaaatccaaaaggaagtgagcacctacatcaagaaa
atcggctacaaccccgccgctgttgctttcgtccccatctccggatggcatggagacaac
atgctggagtccagtgacaagatgaactggttcaaggggtggaagattgagcgcaaggat
ggaaacgccagtggaaccacgctgctggaggctctggatgcgatcctgccccccagccgc
cccaccgacaagcccctccgtctgcccctgcaggacgtctacaaaatcggcggtattgga
actgtccccgtgggccgagttgagaccggcgtcctgaagcccggcatggtggtcaccttc
gctccccccaacctgaccaccgaggtgaagtctgtggagatgcaccacgagtctctgccc
gaggccgtgcccggcgacaacgtcggcttcaacgtcaagaacgtctccgtcaaggaaatc
cgtcgtggctacgtcgctggtgacagcaaaaacgacccacccaaggctgccgacagcttc
aacgctcaggtcatcatcctgaaccaccccggtcagattaacgagggttacgcccccgtg
ctggactgccacactgctcacatcgcctgcaagttcaaggagctgattgagaagatcgac
cgtcgttccggcaagaagcttgaggacaaccccaagtttgtgaagtctggagacgccgcc
atcgtcaaactgatcccacagaagcccatggttgtggagtccttctctagctaccctcct
cttggtcgttttgccgtgcgtgacatgaggcagaccgtggctgtcggcgtcatcaaggcc
gtcgacaccaaggagatttctggaaagaccaccaaggctgcagagaaggcccagaagaag
aaatga
DBGET
integrated database retrieval system
