Kryptolebias marmoratus (mangrove rivulus): 108247931
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Entry
108247931 CDS
T05608
Name
(RefSeq) lysine-specific histone demethylase 1B isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108247931
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
108247931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
SWIRM
DAO
Pyr_redox_2
Pyr_redox_3
HI0933_like
Pyr_redox
Thi4
FAD_binding_2
FAD_binding_3
FAD_oxidored
Lycopene_cycl
GIDA
AlaDh_PNT_C
TrkA_N
2-Hacid_dh_C
MurD-like_N
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
108247931
NCBI-ProteinID:
XP_017291847
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Position
LG5:1562074..1570328
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AA seq
857 aa
AA seq
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MLSDADYSGGASGARRAKKRSSGESPGDGQTLRSSGRQTNARVKRTNNPPPGQSKRKATD
TEEEDEQSEKKYRRCEKAGCSATYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDH
YYRSHKDGYETFASWKKVWTSNGKSEPSLKAFMADQQLPFWVQCTKPDCKKWRQLTKEIQ
LTAALAATYRCGMKFNNIKSEGPDQCSQPEDLRVAEVSDSWWHSMLILPPLFKDSPAGPF
LAAYYPDCVGMSPSGSPSSVCVSELRADRCRAVQPQSKSESRRTWDVEPPHGDQDCPVSV
PGLSPYFQPFYQPNECGKALCVRPDMMELDELYEFPEFSRDPTMYLALRNLILASWHRNC
KEVLTAEKAAQHIIVRGLVRVRCVQELDRVLHFMTRKGLINTGVLMVKQPLLPEKYCIKN
VIIIGAGAAGLAAARQLQNFGSQVLVLEARDRVGGRVWDDPSLGVVVGRGAQIVNGCVNN
PIALMCEQMGVRMHKLGERCDLFQEGGQVTDPAIDKRMDFHFNAILDVVSEWRKDKSQNQ
DSPLGEKVQEIKKNFLQESGLQFSDLEEKVLQFHLSNLEFACGSSLDQVSARSWDHNEFF
AQFSGDHTLLTKGYSVLLHQLAEGLDIRTNCPVQAVDYSGDAVKVTSSDGSQWTAQKVLV
TVPLTLLQKNVLRFNPPLPDRKLKAIHSLGAGIIEKIALQFPFRFWDTKIQGADYFGHIP
PALEKKGMFSVFYDLDPQGNQAVLMSIISGEAVPAVQDLEDKQVVSECLKVLRELFREQE
VPEPLSFFVTRWSRDVWSQMSYSFVKTGGSGEAYDILAEDVHGKVFFAGEATNRHFPQTV
TGAYLSGVREASKMAAV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcggacgcagattactccgggggcgcctccggggctcgccgagccaagaagagg
agctccggggagtcaccgggggacggacagaccctgcgctcctccgggaggcagaccaac
gcccgggtgaagcgcaccaacaaccccccacctggacagagtaaaagaaaagcaacggac
acggaggaggaagatgagcagtcagagaagaagtacagacgatgtgagaaggccgggtgt
tctgccacgtaccccgtttgttttgccagtgcgtcagaaaggtgtgcaaagaatgggtac
acgtctcgctggtatcatctgtcctgtggtgaacatttctgcaacgagtgtttcgatcac
tactacagaagtcacaaagatggctacgagacattcgcctcgtggaagaaggtgtggacg
agtaacggtaaaagcgagcccagcctgaaagccttcatggccgaccagcagctgcctttc
tgggttcagtgtaccaaaccagactgcaagaagtggcgtcagctgaccaaagagatccag
ctcaccgccgccctggctgcgacgtaccgctgtgggatgaagttcaacaacatcaagagc
gagggaccggaccagtgctcccagcctgaggacttaagggtggccgaggtgagcgacagc
tggtggcactccatgctgatcctgccgccgctgttcaaggacagtccggccggccccttc
ctcgccgcctactaccccgactgtgtcggcatgagtccctccgggtcccccagcagcgtg
tgcgtgtccgagctgagggccgatcgctgcagagccgtccagcctcagagtaagtccgag
tccaggaggacttgggatgtggagcccccgcatggtgaccaggactgtcctgtctcagtt
ccaggcctgagtccgtacttccagcccttctaccagcccaacgagtgcggcaaagctctg
tgcgtgcggccagacatgatggagctggacgagctctacgagtttccagagttctcccgt
gaccccaccatgtacctggctctgagaaacctgattctggcctcctggcacagaaactgc
aaggaggttctgactgcagagaaagctgctcagcacatcatagttcggggtttggtgcgt
gtgcgctgcgtgcaggagctggaccgggttctgcacttcatgacccggaagggtctcatt
aacaccggggttctgatggtcaaacagcctctgctgcctgaaaaatactgcattaagaac
gtgatcatcatcggtgccggggccgcaggactggctgctgcgcggcagctgcagaacttt
ggctctcaggtgctggtgctggaggcccgggacagagtcggcggtcgggtttgggacgat
ccctctctgggcgtggtcgtgggccgaggcgctcagatcgtgaacggctgcgtgaacaac
cccatcgccctgatgtgtgaacagatgggcgtcaggatgcacaagctgggcgagcgctgc
gacctgttccaggagggcgggcaggtcaccgaccccgccatcgacaagcggatggacttc
cacttcaacgccatcctggacgtggtgtccgagtggaggaaagacaagtctcagaaccag
gactcgcctctgggagaaaaggtccaggagataaagaagaacttcctgcaggaatctggg
ctccagttcagtgacttggaggagaaagttcttcagtttcatctcagtaacctggagttc
gcctgcgggagctcgttggaccaggtgtccgctcggtcctgggaccacaacgagttcttc
gcccagttctcaggagatcacacgttactcaccaagggctactcggttctgctccaccag
ctggccgagggcctcgacatccgcacaaactgtccggtccaggccgttgattactcaggc
gacgctgttaaagttacctcctcggacggctcgcagtggacggcgcagaaggtcctcgtt
accgtcccgttaactttgcttcagaagaacgtcctccgtttcaacccgccgcttcctgac
aggaagctgaaggcgatccacagcctgggagccgggatcatagagaagatcgcgctccag
ttcccgttccggttctgggacacgaagatccaaggtgcagattacttcggtcacatccct
ccagctctggagaagaaaggcatgttcagcgttttctacgacctcgatccacaggggaac
caggccgtgttgatgtcgatcatttccggtgaagctgtccctgctgtccaggacctggag
gacaaacaggtggtgtccgagtgcctgaaggtcctgagggaactcttcagggagcaggaa
gtcccagagcctttgagcttcttcgtcactcgttggagcagagacgtatggtcccagatg
tcctacagcttcgtgaagacgggcggcagcggcgaggcctacgacatcctggctgaagac
gtgcacgggaaagtcttcttcgctggagaggccacgaaccgacacttccctcagactgtg
acaggagcctacctcagcggcgtcagggaggccagcaagatggccgccgtgtag
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