Kryptolebias marmoratus (mangrove rivulus): 108247975
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Entry
108247975 CDS
T05608
Symbol
dscama
Name
(RefSeq) Down syndrome cell adhesion molecule a isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108247975 (dscama)
Cell adhesion molecules [BR:
kmr04515
]
Immunoglobulin superfamily
DSCAM family
108247975 (dscama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
Ig_5
V-set_CD47
C1-set
Ig_6
C2-set_3
Ig_C17orf99
Interfer-bind
fn3_2
DUF3188
Motif
Other DBs
NCBI-GeneID:
108247975
NCBI-ProteinID:
XP_017291903
LinkDB
All DBs
Position
LG13:complement(26522858..26712012)
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AA seq
2028 aa
AA seq
DB search
MWILALIFSQCILNVFCEDLRSSLYFVNASVQEVVFASTTGTSVPCPAAGVPPISLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFHIPPSSFSKLIHDNTYYCTAENPSGRIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPASVEAYITVVSWEKDTMSINAEMSRFLITSTG
ALYILDVQMEDGLYNYRCMTRHRYTGETRQSNSARLIVSDPINSAPHILDSFERREVMAS
HRVELPCKSSGHPAPKYRWLKDNRPLEPDTRFRQSVTGLLIERAQSSDTGTYVCEVWNGY
GNAEVVGRLLVKELLKVTVSPRKVKGSVGSQVSLTCSVTGSEEYQLSWYRNGELIYPSNS
VRMTGQNRENLVMAGMAKSDGGAYQCFARHGKMSAQDFVQVILEDGTPKILASFSEKVYN
VNEFVSLSCTVKGTPEPRVTWTLDDEPVIRDSRHRVSYYTNAEGHVVSHLNITQTQVPDG
GVYRCICNNSAGTVSYQARINVRGPASIRPMKNLTAIAGRDMYIHCRVIGYPYYSIKWYK
DSNLLPYNHRQRAFENNGTLKLFDVQKDVDEGEYTCNVLVQPQLSTHQSVYVTVKVPPTI
HPFEFPRFSIGQRVFIPCVVMSGDQPVFITWQKDGRPIPASLGVTIDNIDFTSSLRISNL
TLAHNGNYTCIARNQAAAVEHQSQLIVRVPPKFVVQPKDQDAIYGKAVILNCSAEGYPVP
TIQWEYSKGAGVPQFKPIALNSGFRIEVLVNGSLLIKHVLEEDSGFYLCRVSNDVGADVS
KSMYLNVKIPAMITSYPNTTLATQGEEKKMSCTAHGEKPIMVRWEKEERIINPETSRYVV
SVKEVGDEVISTLQIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVK
DRTIALRWTMGFDGNSPITGFDIESKNKSASWDTAQKTKDVSPQLNQATIIDLHPSSTYN
IRMFAKNLIGKSEASNELTITTDEAAPDGPPQDVQLEALSSQSIRVTWRPPKKHLQNGAI
RGYQVGYREYSSGGNYQFSVISVETTGDNAESLALDNLKKFTQYGVVVQASNSAGTGPSS
TEVAATTLEDVPSRPPENVQAVATSPEVISLSWLTPPKDALNGNLLGFRVIYWANLPDGE
LGEIRNVTTSKPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIYTRTKEDVPGPPAGVK
AAAASNSVVFVSWLPPLKVNGIIRKYTVFCSNPHPTVSSEFEAAPDVFFYRIPNLSRNRQ
YSIWVVAVTAAGRGNASEIITVKPMADAPARILTFNRTVTTPWMRDIVLPCKAVGDPSPS
IKWLKDNNGTPAPVVIDSRRSMHGNGSLVIRTVKAEDSGNYTCVASNNFGLDKIVLNLQV
QVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGNFAISPSERAY
RLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQYSKEQELFTSINATRVKLNL
NGWNNGGCPITSFTLEYRPVDSPTWTTAQRTSLTKSCILYDLQEATWYELQMKVYNSAGY
AEKRVKFATLSYDGSTIAPLVKAPNVSENNSGGGEGLKMMVTISCVLVGIVVIFIGLLVL
RRRRREQRLKRLRDAKSLAEMLMSKNTRPAEPINKQQQTLRMHIDIPRAQLLIEERDTME
TVDDRSTVLLTDNDFGETQKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSKSNPTAR
RTAKPGPAARNRYASQWTLNRPHPPVSSHTLNTDWRLPTPRVTGSVDKESDSYSVSPSQD
TDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTAGTND
YTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAVPKAHRPGGELVHLPPYLRMDFLLN
RGMSCSASSRGTASGERAAMGQACLEPQKSRSLKRPSRMAPPTPIEAPQASRDPAAQWQP
GSAATLPHREGSELSQATKLSTSQESLLDSRGHLKQSSNPYAKSYTLV
NT seq
6087 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggctcttatcttttcccagtgcatcttgaatgttttctgtgaagatcta
cgttccagcttatattttgtcaatgcatctgtgcaagaggtagtgtttgccagcaccaca
gggacatcagtgccctgtcccgctgcaggcgtgccccctatctcactgcgctggtacctg
gccaccggcgaggagatctatgatgtgccaggtattcgccatgtgcaccccaatggcacc
cttcagatcttccacatccccccttccagcttcagcaaactcatccatgacaacacttac
tattgcacagcggagaacccctcagggagaatcaggagccaagatgtccacatcaaggct
gtcttacgagagccgtacactgtccgggtggaggaccaaaaagccatgagaggcaatgtg
gcggtcttcaagtgcattatccctgcctcagtggaggcctacatcactgttgtgtcctgg
gagaaagacacaatgtcaatcaatgctgaaatgtcacggtttctaattacatccacggga
gccctgtatatcctggatgtgcaaatggaagatgggctgtacaactacaggtgtatgaca
cgacatcggtacacaggagagacccgacaaagcaatagtgcccgtctcattgtttcagat
ccaatcaactcagcaccccacatcctggacagctttgagcgtcgtgaagtgatggcatct
catagagtagagctgccctgcaagtcctctggccaccccgcacccaaataccgctggcta
aaggacaaccggccactggagccagacacacgcttcagacagagtgtgactggtcttctg
atagaaagagcccagtccagtgacacagggacatacgtgtgtgaagtgtggaatggttat
ggcaatgctgaggtggttggcaggctcctggttaaagaactcctgaaggtgacagtaagt
ccacggaaggtgaagggcagcgtgggaagccaggtttcactgacctgcagtgtaacaggc
tctgaggagtaccaactatcctggtatcgcaacggagagctcatctaccccagtaacagt
gtgcgaatgacgggccaaaacagagaaaacctggtcatggctggtatggccaaaagcgac
ggaggggcctatcagtgctttgccagacatggcaagatgtctgcccaggactttgttcaa
gtcatacttgaagatggcacccccaagattctggcatcattcagcgagaaggtctacaac
gtcaatgagtttgtgtctctctcgtgcacggtgaagggcacaccagagcctcgggtaaca
tggactctggatgatgaacctgtgatacgggatagtcggcaccgagtttcctactacaca
aatgctgaaggccatgtggttagccacctcaacatcactcagacccaggtccctgatgga
ggggtgtaccggtgcatctgcaacaactcagccgggacagtttcctaccaggcgcgaata
aacgtaagagggcctgccagcatcagaccaatgaaaaacctcactgccattgctgggcgg
gacatgtacatccattgccgtgtcatcggctacccctactattccatcaagtggtacaag
gactccaatttgctgccatacaaccatcggcagcgggccttcgagaacaacggcaccctg
aaactgtttgatgtgcagaaggatgtggatgaaggcgaatacacatgtaacgtgttggtt
cagccccaactatccactcatcagagcgtctatgttacagtgaaagttccacctactatc
cacccatttgagtttccccggttttccattgggcaacgagtcttcataccatgtgtggtc
atgtctggtgaccaacctgtcttcatcacctggcagaaggatggccgaccaatcccagcc
agtctgggtgtcaccatagacaacatagactttaccagctctctgcgtatctccaacctc
acgctggcccacaatggcaactatacctgcattgcacgcaaccaagctgctgctgtagag
caccagagtcagcttattgtccgagttcctcccaaatttgtggtgcagcccaaagaccaa
gatgcaatctatggaaaggctgtgatactgaactgctcagctgaaggttatcctgtacct
accatccagtgggagtactccaaaggtgctggggtccctcagttcaaacccatcgccctg
aactcaggctttcggattgaggttttggtgaatggctcgctgctcatcaagcatgtgctg
gaagaagacagtggtttctacctttgtagagtcagcaacgatgttggagcagatgtcagc
aagtctatgtatctgaatgttaaaattcctgccatgatcacatcctaccccaacacaacg
ctggccacacagggagaggagaagaagatgagctgcacagcgcatggtgagaaacctatc
atggttcgctgggagaaggaggaacggatcattaacccagagaccagccgctatgttgtt
tcagtcaaggaagtgggggatgaagttatctccaccctgcagatcatgccgacagtaagg
gaggattcaggcttcttctcctgccatgccatcaactcctttggtgaagacaggggaatc
atacagctcacagtacaagagccaccagatcctccagaggtagagatccgagaggtgaaa
gacagaaccatcgccctgcgttggaccatgggtttcgatggcaacagccccattacaggc
tttgatatcgagagcaaaaacaaatcagcctcctgggacactgctcagaagacgaaagat
gtctcacctcagctcaaccaggccaccatcatcgacctccacccctcctccacatacaac
atccgcatgtttgccaagaacctcatcggcaaaagtgaggccagcaatgagctcaccatc
accacagatgaagcagctcctgatggaccacctcaagatgtacagctagaagccctctcc
tctcagagtatccgtgtcacgtggaggccacctaagaagcacctgcagaatggggccatc
agaggctaccaggtgggctacagggagtacagctctggtggaaactaccaattcagtgtg
atcagcgtagagacgacaggagacaatgcagaaagtctggcgctggataacctgaagaag
ttcacccagtatggagttgtggtgcaagccagcaacagcgcagggacagggccatcttcc
actgaggtggctgctaccacactggaggacgtgccaagtcgtcctccggaaaatgtccag
gctgttgccacgtctccagaggtcatctctctgtcctggctgactcctcccaaagacgct
ctgaacgggaatctgctgggcttcagggtcatctactgggccaacctgcctgacggagag
cttggagagattaggaatgtaacaacttctaagccctctctggaactggatggactggaa
aaatacaccaactacagcatccaggtgctggcgtttaccagagctggtgatggcgttcgc
agtgaacagatttatacccgcaccaaggaggatgttcctggtcctccagctggtgtaaaa
gcagcagctgcatccaactcagtggtatttgtttcttggcttcctcctctcaaagtgaac
ggcataatcagaaaatacactgttttctgctccaacccacaccctacggtgagtagtgaa
tttgaggcagcaccagatgtgtttttttaccgcatcccgaacctgagcaggaaccgacag
tacagcatctgggtggtggccgtcactgctgcaggccgtggaaatgccagcgagatcatc
actgtcaaacccatggctgatgctccagctcgaatactgactttcaacaggacagtaaca
actccctggatgagggacattgtgcttccttgtaaagctgttggtgatccatccccaagc
atcaagtggctaaaagacaataatggaactcccgcaccagttgtgattgacagtcggcgc
agtatgcatgggaatggcagccttgttatccgcacagtaaaagcagaggattctgggaac
tacacttgtgtggccagtaacaactttggtttggataaaattgttctcaatctgcaggtt
caagttccaccagaccagcctcgccttaccgtgacaaagacaaccacaacctcaatcacc
ctctcctggatcccaggagacaatggaggcagctccatacgaggttatattctgcagtac
tcagaggataacagcgaacagtgggggaattttgccatcagtcctagtgagcgtgcctat
cggctggaaaacctcaaatgtggtacctggtataagttcaccctcactgcccagaatgca
gtgggtcctggacgtatcagtgagatcatcgaggcaaagacccatgggaaagaacctcaa
tactccaaagaacaagagctcttcaccagcattaatgccactcgggtcaagctcaatctg
aatggctggaataatggtggctgtccgatcacctccttcaccttggaatatcggccagta
gactcccccacttggaccacggcacagcgcacatccctcaccaaaagctgcatcctgtat
gacctgcaggaggccacctggtacgagctgcagatgaaagtgtacaatagcgctggctac
gccgagaagagagtgaagtttgcaacattaagctacgatggcagtaccatcgctccttta
gtgaaggcacccaatgtaagtgagaacaactctggcggcggtgaaggtttgaagatgatg
gtgactatttcctgtgtgttggtgggtatcgttgtaatcttcattggacttctggtacta
agacggaggaggagagaacaaaggctcaaaaggctgagagatgctaaaagtttggctgag
atgctcatgagtaaaaacacacgtccagcagagccaattaacaaacagcaacagacgctg
cggatgcacattgacatccccagagcccagcttcttattgaggagagggacaccatggag
actgttgatgacagatccactgtgttactgactgacaacgactttggggaaacacagaaa
cagaagtcgtccacagtcacccacaccgtccactatcagtcactctcccaagccactggt
ccactggtagatgtatcagatgccagaccaggaaccagtaagtccaaccccactgcccgt
cgcacagccaaacctggtccagctgcccgcaaccgctatgccagccagtggacccttaac
cgtccgcacccccctgtttcctcccacactctcaacactgactggaggctgcccactccc
agggtcacaggttctgttgacaaggagagtgacagctacagcgtcagcccatctcaggat
acagaccgagcacggagcagcatggtgtcaacagagagtgcttcctccacctatgaggag
ctggccagggcctacgagcatgccaagatggaggagcagctgcgccacgccaagtttacc
atcacagagtgcttcatctctgacacctcctcagagcagatgacagcaggcacgaatgac
tacaccgacagcctgacttccagcacaccgtcggaatcgggcatctgccgcttcaccgct
tccccacccaagcctcaggacgtcagtcgggtcatgaacatggccgtgcccaaagcccac
agaccgggaggcgagctggtccaccttcctccatacctgcgcatggacttcctgttaaac
cgaggcatgtcctgctcagcctcatccagggggacagctagtggggagagagcagccatg
ggtcaggcttgtctcgagccccagaaaagtcgctcactaaagcggccctcccgcatggca
cccccaacgcccatagaggcccctcaggccagcagggacccagcagctcagtggcagccc
gggtctgcagccacactcccccacagagagggctcagagttgtcccaagctaccaagctc
agcacctcccaggaatccctgctggactcaagaggacatctcaaacagagcagcaaccca
tacgcaaagtcctacacactggtataa
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integrated database retrieval system
