Kryptolebias marmoratus (mangrove rivulus): 108248071
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Entry
108248071 CDS
T05608
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108248071 (snapc4)
03021 Transcription machinery [BR:
kmr03021
]
108248071 (snapc4)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
108248071 (snapc4)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
108248071 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Rap1_C
Myb_Rap1
Motif
Other DBs
NCBI-GeneID:
108248071
NCBI-ProteinID:
XP_017292048
UniProt:
A0A3Q3A9E0
LinkDB
All DBs
Position
LG1:30582116..30591131
Genome browser
AA seq
1582 aa
AA seq
DB search
MSVSLSAERDRIQRQVDELEQSLSVTQNELDLLSSETDDGSDSEDEQDELGQVCVQSAAH
LLAQKEKVQTAIQNLEDRLGQHSPISVSSNDSSSSSDESDLGLSESVDSCLQLNLVYQQV
VQETLDHLETLLIHNQRQQRDVTSQIFGPDKEPSRDRPTSSLKHPTKMFLGSFLKPYFKD
KLTGLGPPANPEARLKAQRMAGCPDDKKLRIKRWESWQKTLLIHAVTRDGLKRLIQPKLS
RVDYLTQKLSSASEADRQQLREQIDSLETEMDLLRQKKEEELIGDRYEEHDWQKISNIDF
EGTKDAEDIRLFWRNFLHPSINKTKWSKEEVQELKEVSRRHGERHWDSIAEDLGTGRTAF
MCLQMFQRFVSDSLKHGTWTPEEDSQLRELVDKMRIGNFIPYTQISYFMEGRDPAQLIYR
WNQVLDPNLKKGLWTKEEDQLLLRAVSRHGDKCWWKVRLEVPGRTDSSCRDRYVDCLRKG
LKRGPFNKQETELLKALVEKHGVGRWAKIAAEIPHRLDCQCMREWRKLTQPPKTPKKRKR
PRRRGAKRGRDRKETKVAASARRRVKRQTVKIKTEEEEEEEEEEEEEEEEEENVEVQYMD
SDEDTKKKERKVAQTVEEEEEEYVIPPMQEWIPAEKTQTVSSLKFLPVMLPSSSDPQDNK
AVRSTIVGKSGRSVIVGAPPRELRWEERHSSAAMMMASRDQLRVYLSLMEQKFNKPNPRP
KGGPLNPLTRVTNRGLDYELQAAVTPWIGNLLIAENRRQTAVDVLRERAEVSGVSTSSIF
LLLLQAMNVDIIGCRDMIEKRKNKVVLQAPPPTASSSRKKDPGSVTGLRQQRKATGRQQL
QEAQQEKPSLPPLSQPRLLQVSPARTPQVSPHHVLLPPSVSQPTVASIQVAPPRALKIRA
PPVPPFSVVSVLPNSMSPLIPLAPPPPSVSVGPTVLPNSTSPLIPLAPPPPSVSVSPTVS
STHAVLPTAITPSSTRREEEATCRSQSRKVGPGVVSSSETDQSSQTVRCFPLPSSLLSIT
PPLPPPPVSSCPSSAESLTLAPPTSTVTSKPPLLPSTLAPRDHITHNTGPTPKHPDPTPK
NMSKCKSGGRKRKKEEEKQQEVSGACSDVTQERKRIRKPSLKIREAEEAQTAAKKKKKRV
PRSASKDAINAQALPLTQAAGWFLPSSQPMWVMTPSGLVPVAPPQHGQLAFSPSAPLSSP
VAPPQHGQLAFSPSAPLPSPVAPPQHGQLAFSPSAPLPAPVAPPQHGQLAFLASAPLPAP
VAPPPPTAESLRFVGVKPVSVSVNSPNPAPPTCQSKPLPPAIVLSHDLKSSSSHRPPAKV
VLPYRSVIRVDSPKAPPLRKEGLHFNPALLSLEPPEVVRDWLSGRGGVAVPGARLALPYL
PPFVSSLSTLSALLEAKNTLTKSSLQLLSSSQTDPDSAHLPPDLPDSTSDLRPAEGHPDP
PASSDQQEEEEEEEQVKAVRQLVAERFSSNPAYQLLKARFLSCFTVPALLATVEPITKEK
PSHQTNQEEEEEDEEEEPLKKIKERGRRRRTERSLMLFDDSAAPANHFAGISVTCRPAAD
PQQVPQNQPVETRPDHQTSTQQ
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgtccctgtcagctgagagggacaggatccagagacaagtggacgagttggaa
cagagtctctctgtgactcagaatgaactggacctgctgagcagtgagacagatgatggc
tcagacagtgaggacgagcaggatgagctgggacaggtgtgtgttcagtctgcagcccac
ctgttggcccagaaggagaaggtccagacggcaatccagaacctggaggacaggctggga
cagcacagtccaattagtgtgtccagcaacgacagcagcagctccagtgacgagagtgac
ctcggcctgtctgagtccgtggactcctgtctccagttgaacctggtctaccagcaggtt
gttcaggagacgctggaccacctggagacactcctgatacacaatcagagacagcagagg
gacgtcacgtctcagatttttggaccggacaaagagccttccagagaccgtcccacctcg
tcccttaaacatccaaccaagatgtttctgggaagcttcctgaaaccgtactttaaggac
aaactaacaggactgggtcctccagccaatccggaggccaggctgaaggctcagaggatg
gcaggatgtccggacgacaagaagctcagaataaaacgatgggagagctggcagaagact
ctgttgatccacgcagtgacccgagacggtctgaagagactcatccagcccaaactgtcc
agggtggactacctgactcagaagttgtcctcagcgagtgaagcagacagacagcagctc
agagagcagatagacagcttggagacagagatggacctgctcaggcagaagaaggaggag
gagcttatcggtgatcgatatgaagaacacgactggcagaaaatctctaatattgatttt
gaagggacgaaggacgcggaggacatccgtctgttctggaggaatttcctgcatccgtcc
atcaacaagacgaagtggagcaaagaggaggtgcaggagctgaaggaggtcagcaggaga
cacggagagagacactgggacagcatcgctgaggacctggggacggggaggacggccttc
atgtgtcttcagatgttccaacgtttcgtctcagactctctgaaacacggcacctggact
ccagaagaagactctcagctcagagaactcgtggacaagatgaggatcggaaactttatc
ccctacacgcagataagctacttcatggagggccgtgatccggctcagctcatctacagg
tggaaccaggttctggaccccaacttgaagaagggcctgtggaccaaagaggaggaccag
ctcctgctgcgggccgtgtctcgtcatggagataagtgctggtggaaggtccggttggag
gttcctggacgcaccgacagcagctgcagggacaggtatgtggactgtctgaggaagggc
ttgaagcgaggacctttcaacaagcaggagacggagctgctgaaggcgttggtggagaaa
cacggagttggtcgctgggcaaagattgctgcagagattcctcatcgtttggactgtcag
tgcatgagagaatggaggaaactgacacaacctcctaagacgccaaagaaaaggaaaagg
ccacgaagaagaggagcaaaacgaggaagagacaggaaggagacgaaggtggcagcttca
gccagaagaagagtcaagagacaaacagtgaaaatcaaaacggaggaggaagaggaggag
gaggaagaggaggaggaggaggaggaggaagaggagaatgtggaggtgcagtacatggac
agtgatgaagacacaaagaagaaagagaggaaggtggcgcagactgtggaggaggaggag
gaggagtacgtgatcccccccatgcaggagtggatcccagcagagaaaactcagaccgtc
tcctccctgaagtttctcccggtgatgctgccgtcatcctccgaccctcaggacaataaa
gccgtccgctccaccatcgtgggaaagtccgggcgctccgtcatcgtcggagctcctccc
agagagttgcggtgggaggagcgccacagcagcgctgccatgatgatggcgtcccgcgac
cagctgcgagtctacctaagcctcatggagcagaagttcaacaagcccaacccccgacct
aaaggaggaccgctgaaccccctgacccgggtcacgaacagggggttggactacgagctg
caggccgcggtcacgccatggatcggaaacctgctgatcgcggagaacagacggcagacg
gctgtagacgtcctgagagagcgagcggaggtgagtggcgtttccacctcctccatcttc
ctgctgctcctccaggccatgaacgtggacatcatcggctgtagagacatgatcgagaag
aggaagaacaaggtggtgctgcaggctccgccccctacagcctcatcaagcaggaagaag
gatccgggcagcgtcacaggactccgtcagcagaggaaggcaacggggaggcagcagctt
caggaggcgcagcaggagaaacccagcctgcctcctctgagccagccccgcctccttcag
gtatctcctgccaggacgcctcaggtgtctcctcaccatgtcctccttcctccttctgtc
tctcagcccactgttgcttccattcaggttgcacctcctcgtgcactgaaaatcagagct
cctccggtacctcctttctctgtggtctcagtgctgccaaactccatgtcccctctcatc
cctttagccccgccccctccctctgtttctgttggccccactgtgctgccaaactccacg
tcccctctcatccctttagccccgccccctccctctgtttctgttagccctactgtgtcc
agtacccacgctgttctgcccacagccattactcccagctccacaaggagggaggaggag
gccacctgcaggagtcagagcaggaaggtgggtccaggtgtggtttcttcttcagaaacg
gatcagagcagccagactgtcagatgttttcctcttccttcctctctcttatctataact
ccacctcttcctcctcctcctgtctcatcttgtccttcctctgctgaaagcctcacttta
gctccgcccacctccacagtaaccagtaaacctccactcctcccctccacactggcccct
agagaccacatcactcataatactggccccacccccaaacatcctgaccctacccccaaa
aatatgtctaaatgtaagtctggaggcagaaaaaggaagaaggaggaagagaagcaacag
gaggtgagcggagcctgttcagatgtgactcaagagaggaagcggattcgcaagccgagc
ctgaagatcagagaagccgaggaggcccagactgcagcaaagaagaagaagaaacgggtc
cccaggtccgcctcaaaggacgccatcaatgctcaggctcttcccctgactcaggcggct
gggtggtttttaccttccagtcagcccatgtgggtcatgaccccttctgggcttgttcca
gtggccccgcctcaacatgggcagctggcgttttcaccgagcgcccccctctcatctcca
gtggccccgcctcaacatgggcagctggcgttttcaccgagcgcccccctcccatctcca
gtggccccgcctcaacatgggcagctggcgttttcaccgagcgcccccctcccagctcca
gtggctccgcctcaacatgggcagctggcgtttttagcgagcgcccccctcccagctcca
gtggctccgccccctcccaccgctgaaagcttgcggtttgttggagtgaaaccagtctct
gtgtctgtaaattccccaaatcctgccccacccacatgtcaatccaagcccctcccccca
gccattgttctgtcacatgacctgaagagtagctcctcccaccggcctcctgctaaagtg
gtcctgccttataggagtgtgatcagagtagactcacccaaggctcctcccctcaggaag
gaggggctgcacttcaaccccgccctactgtccctggagcccccagaggtggtgcgtgat
tggctgagtgggcgaggaggcgtggctgtacctggagcaaggttggccctcccctacctg
cccccgtttgttagctctctgagcacgctcagtgcgctgcttgaggccaaaaacactctg
acaaagtcgtctctgcagctgctgagcagctcccagaccgaccctgactccgcccacctt
cccccagacctgccggactccacatcagacctgagaccagctgaaggccacccggatcca
cctgccagctcagaccagcaggaagaggaggaggaggaggagcaggtgaaggcggtgcgt
cagctggtggctgagcgtttctcctctaaccccgcctaccagctgctaaaggcacgcttc
ctgtcctgcttcactgtccccgccctcctggccaccgtggagccaatcacaaaggagaag
ccatcacatcaaaccaatcaggaggaagaggaggaagatgaagaggaagagcctctgaaa
aaaatcaaagagagaggaagacgaaggagaactgaaagatctttgatgctgtttgatgac
tctgcagctccggccaatcacttcgcaggcatcagcgtcacctgcaggcccgccgcagac
ccacagcaggttccacagaaccaacccgtggaaacccgaccagatcatcagacttccaca
caacaataa
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integrated database retrieval system
