Kryptolebias marmoratus (mangrove rivulus): 108248110
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Entry
108248110 CDS
T05608
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108248110 (rfwd3)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108248110 (rfwd3)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108248110 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
zf-RING_UBOX
WD40_CDC20-Fz
Beta-prop_THOC3
zf-C3HC4
WDR55
WD40
zf-C3HC4_2
zf-RING_11
EIF3I
Rtf2
Beta-prop_WDR3_1st
zf-rbx1
Beta-prop_EML_2
zf-ANAPC11
Beta-prop_WDR3_2nd
zf-C3HC4_4
Beta-prop_WDR75_1st
zf-RING_5
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
CFAP43_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_EIPR1
zf-RING_Vps41
Beta-prop_WDR36-Utp21_2nd
zf-Nse
ANAPC4_WD40
NSRP1_N
Motif
Other DBs
NCBI-GeneID:
108248110
NCBI-ProteinID:
XP_017292119
UniProt:
A0A3Q3A0P5
LinkDB
All DBs
Position
LG11:2114773..2151633
Genome browser
AA seq
712 aa
AA seq
DB search
MEAMEVDSPVELQRGGEQSEAVGAAVAPAEEAAAPILISDSSSSTEVDEDEDGDRDEGQA
AARTLLRLPATWAFSQRAAGGAAAAPSGAPGTPMRRRLRQGLRVHYPSQTAAPSRTFPDF
LLRAPAASVSQPQSGSTTETSESEDEEEGEEGAAAAAVAAEPTEPVPPSASTQHSQQQEI
QNSGSAAHSDGTEAQRQESQSAPGPASVQSFHSEDTEGDNCTICLEAWTTAGQHRLSALR
CGHVFGYSCIQHWVKSQGSAARCPQCNKKAKRSDVVLLYAPKLRAVDNSEEESLKKSLEQ
EQCLRRRAELESAEYKLKLQVVTNKYGQAQHELQELRALIAQTGRSSVPSSSSSSCHVFG
QSQRVDGSRTAQYSFSRAVLLSQAGGCRVLSYCEPLSCLLASQPSPHSTLVPGCGVKKVS
VVNMKASQYVPIHNKQIRGLSFNRQNDSLLLSAALDNTIKLTSLLTNTVVQTYNTGKPVW
SCCWCLDNSNYVYAGLSNGSVLIYDTRDTSTHIQELEPLRSRCPVASLCYVPRAASSSFP
CGGLIAGSLEGACFWEQVNETTYRPHVLPLEGSGCTDIQVETESRHCLVTYRPGRSNPSL
RCILMALSRAPQQDSGQLPTCSFSPVQTFTAGSSCKLLTKNAVFKSPDGSGTLVCAGDEA
SNSTMVWNAGSGSLLQKLPADLPVLDISPLSVNGEHLLASLTEKMLKLYKWE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatggaggtcgactcaccggtggagctgcagagaggtggggagcagtcagag
gctgttggtgcagctgttgctcctgctgaggaagctgctgcacctattcttatctcagac
tccagcagcagcactgaggtggacgaggatgaagacggtgatcgtgatgaaggacaggca
gcagctcggacccttctgaggcttcctgccacctgggcgttcagtcagagggcagcaggt
ggagctgcggctgcaccttcaggggctccagggacaccaatgagaagacgactcagacag
ggtctcagggtgcactaccccagccaaactgcagcaccttccagaacctttccagacttc
ctgctgcgagcccctgctgccagcgtctctcagccccagtctggcagcaccacagagacc
agtgagtctgaggatgaggaggaaggagaggaaggcgcagcagctgctgctgttgctgca
gagcccactgagcctgtaccccccagtgcctccacccagcattcccagcaacaggaaata
cagaattctggctcagctgcacatagtgatggaactgaagctcaaagacaggaatcccag
tcagctccaggcccagcttcagtccagtcgttccacagcgaggatactgaaggggacaac
tgcaccatttgtttggaggcgtggacaacagcgggacaacacagactgtctgctctgcgc
tgtggacacgtgtttggttacagctgcatccaacactgggtcaaaagtcagggctcagct
gctagatgtccacagtgcaacaagaaagcaaagcgatcggacgttgtgctgctgtatgcg
ccgaagctgagagctgtggacaactctgaggaggagagcttaaagaaatctctggagcag
gagcagtgtctaaggaggagggctgagctggagtcagcagagtacaaactcaaactacag
gtcgtcaccaacaaatatggacaggcacaacatgagctgcaggagctgagggccttgatt
gcccagactggcaggagttcagttccctcctcttcctcgtcgagctgtcatgtcttcggc
cagtctcagagggtagacggctccaggacagctcagtacagcttctccagggcggtgctg
ctgtctcaggcaggaggctgcagggttttgtcctactgtgaacctctgagctgcctgctg
gcctcccaaccctcccctcactcaacactggtgcccggttgtggggtgaagaaggtgagc
gtggtgaacatgaaagccagtcagtatgttcccatccacaataaacagatccgaggtttg
tccttcaacagacaaaatgacagcctgctgctgtctgctgcattggacaacaccattaaa
ctgacaagtctgctgaccaacactgtggtgcagacgtataatacaggtaaaccagtgtgg
agctgctgctggtgtttggataacagtaactacgtctacgctggtttgagtaacggctcc
gtgctcatttatgacaccagagacaccagcacacacatccaggagctagagccactccgc
tccaggtgtcccgtagcgtctctgtgctacgtgccacgggcagcatccagctcatttccc
tgtggtgggctgatcgctggctctctggagggggcctgtttctgggagcaggtgaacgag
accacttacagaccacatgtcctgccactggagggctctggctgcacagacattcaggtg
gagacggagagcagacactgtctggtcacatacagaccaggacgctccaacccctccctg
cgctgcatcctgatggccctgagtcgagcccctcagcaggattccggtcagctgcccact
tgctccttctcacctgtgcagactttcactgccggctcgtcctgcaagttgctcaccaag
aatgctgtcttcaagagtccagatggaagtgggaccctggtctgtgcaggagatgaggca
tccaactccaccatggtgtggaacgccggcagcggctccctgctgcagaagcttccagcc
gacctaccggtgttggacatcagccccttgtcggtgaacggtgagcacctcctggcctct
ctgacagagaagatgctgaagctctacaagtgggaatga
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