Kryptolebias marmoratus (mangrove rivulus): 108248204
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Entry
108248204 CDS
T05608
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108248204 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108248204 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
108248204 (ldb3b)
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GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108248204
NCBI-ProteinID:
XP_017292310
UniProt:
A0A3Q3AEQ0
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Position
LG17:complement(21129697..21142456)
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AA seq
290 aa
AA seq
DB search
MSTYTVTLNGPAPWGFRLQGGKDFNMPLTISRITPASKAAGGSLAQGDIIAAIDGASTDG
MTHLEAQNKIKLATNKLTLSMQKSRRPAPVPTATPRMESPMPIIPHQKVIANTAANVEYT
PSFNPIALKDSALSTHKPIEVRGPGGKATIVHAQYNTPISMYSQDAIMDAIAGQSQAKGH
DSEEAGSPLAGVLPVKEPVVDCASPVYQAVIRPGETTQDMSEWARRAANLQSKSFRMLAH
ITGTEYLQDPDEEALQRSREKFESEVKGPRFAKLRKWHHGLSAQILNVQE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgtacacagtgactctgaacggcccggctccatggggcttcagactacaggga
gggaaggacttcaatatgccgctcaccatctccaggataacccccgccagtaaggcagca
ggtgggagcctggcccagggcgacattatcgcagccatcgatggggccagcaccgacggg
atgacacacctggaggcccagaacaagatcaagttggccaccaacaaacttacgctctca
atgcagaaatcaagacgtcccgctccagttcccacggcaactccaagaatggagtcaccg
atgcccatcatcccacaccagaaggttattgccaacacagctgcaaatgtggagtacacc
cccagttttaaccccatagctttgaaagactcagccctgtccacccacaaacccatcgag
gtgaggggtcccggaggaaaggccaccattgttcacgcccagtacaacacaccaatcagc
atgtactcacaggacgccatcatggacgccatcgcaggacagtcacaggccaaaggacat
gacagtgaggaggccggatctcctttggctggagttctgcccgtcaaagagcccgtggtg
gactgtgcctctccagtgtatcaggcggtgatcaggccaggagaaacaacccaggacatg
tctgagtgggctcgccgtgctgccaacctgcagtccaaaagcttcaggatgctggctcat
atcaccggcactgaatacctgcaagatccagatgaggaagcgctgcagagatcaagagag
aagtttgagtctgaggtcaaagggccacgttttgccaagctgaggaaatggcaccacgga
ttgtctgcacagatcctcaacgtccaggaataa
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