Kryptolebias marmoratus (mangrove rivulus): 108248271
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Entry
108248271 CDS
T05608
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108248271
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108248271
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
108248271
NCBI-ProteinID:
XP_017292424
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All DBs
Position
LG13:complement(15215570..15223914)
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AA seq
1026 aa
AA seq
DB search
MENLTPEQWREIMNKKMRFPPELLNAIQEGKIELLSGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGSEDAMDTLLQGVKFDFRQIHEALLVAVDTNQPMVVKRLLDRLDQEKGNKMDV
RSFSQAIFDRSIDNSQFAPGVTPLTLACQKDLYDIVAMLSQKGHGIPWPHKISCSCLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVTSDDAMLTAFSLSKELRKLSQKEPEFKPQYL
SLEQLCQEFAVELLGMCRNQSEVTTILNSCGDESQDSLDEQAFEEGIPTLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLEGWRGSRTAWKLLVSVGIFFTMPFLCLIYWIAPKSKPG
KLLKIPVIKFLLHSASYLWFIITLLGESITMEMYRGKFASREQNILHSSFHMVWVVGFFW
YECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFTLRVLIMLKGYFLCQDQSSNEDCIYF
TQTLRNEWHQEDPQMISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGINNVYVPYVISPRLGRFNETFKFLYWTMFGVANQDYVDMPRFVLAEF
VGRILYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKAAFYILRGIFRRICCCCSCNSEQKYPPLASMSSEKGAEDSQLPYRQQVIRA
LVQRYIESARREFEEAKRKDIGNRITELNKAVSRMHGEMKVIQQFLVAEGHVSNDALTRD
GSSVLGKYIIGAKNNFRGFNTRQDDKNTSLKVSVHHGGEGIDKDKADSDAAQQETSKRLN
QVDECEEEPKHVTDCEVVKMEEGRAKSEQRDEREAEIREQAEENQSENGDKEEATGGSSF
DEAEEKAETTQGEADTRSEEEINTGSKVTEIRTETKPEHTESATVSCETTDTKKIINKFK
DMELKERNTEMGLMKGKRFENNVRERDGQSGNKEVIPSPTGSSSSHDTGFGSQEGEGAID
GAPVKP
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagagcaatggcgcgagataatgaacaagaagatgcgcttccct
ccggagctcctcaacgccatccaggaagggaagatcgagctgctgagtggactgctgaag
acgggcgatggcatcattcgccagctggatgaatccgaggatcgccagtggagggaggct
ctcaacctctccatccgcctgggcagcgaggatgccatggacaccctcctgcagggcgtc
aagttcgacttcaggcagattcacgaggccctgctggttgctgtggacaccaaccagccc
atggtggtgaagcgtctattggaccgtctggaccaggagaagggcaacaagatggatgtc
cgatccttttcccaggctatcttcgaccgctccattgacaactcccagttcgcccctggt
gtgacccctttgaccctagcctgtcagaaagatttgtatgacatagtcgctatgctcagc
cagaaaggccacggcatcccgtggccacacaagatatcttgttcctgtctggagtgtcgc
aatggccggcagtacgacctgctcaagttctccttgtctcgtatcaacacctatcgtggc
atcgccagccgggcctacctgtccgtcacctctgacgatgccatgctgaccgctttcagt
ctcagcaaagagctccgcaagctgtcgcaaaaggagccagagttcaagcctcagtacctg
agcctcgagcagctctgtcaggagtttgccgtggagttgctggggatgtgccgcaaccag
agcgaggttaccacgatcctgaacagctgcggagacgagagccaggattccttggatgag
caggccttcgaggaaggaatacccaccctgtcccgtctgaggctcgctgtcaactacaac
cagaagcagtttgtggcgcacccgatctgccagcaggttctgtcatcgatttggtgtggg
aacctggaaggttggagaggcagcaggacggcctggaagctcttggtctccgttgggatc
ttttttactatgccctttctctgcctcatctactggatagcaccgaagtcgaagcccgga
aaactgcttaagattcctgttattaagttcctccttcattctgcgtcctacctgtggttt
atcatcactttgcttggagagtcaataaccatggagatgtatcggggcaagtttgcttcc
cgggagcagaacatcctgcacagctccttccacatggtgtgggtggtcgggttcttctgg
tatgagtgtaaagaagtgtggatcgagggactgcgcagttacttcctagactggtggaac
tgcttggatgtgatggtgctcagcatgtacttggcatcctttacactgcgagtgctcatc
atgctcaaaggctacttcctctgccaggatcagagcagcaatgaggactgcatctacttt
actcagaccctgcgtaatgagtggcatcaggaggacccgcagatgatttcggaggtgctg
tttgctgtgaccagcatgctgagcttcacccggcttgcgtacatcctgccagcacacgag
tctctgggaacgctgcagatctcaatagggaagatgattgacgacatgatgagattcatg
ttcatactgatgataattgggacggccttcctctgtggcatcaacaatgtctacgttcct
tatgtcatctctccacgacttggcaggtttaatgagaccttcaagttcttgtactggacc
atgtttggggtggccaaccaggactacgtggacatgcctcggtttgtcttggcagagttc
gtaggaaggattctgtacggcatcttcaccctcgtcatcgtcattgtcctcctcaacatg
cttattgctatgatcaccaactcatttcagaaaattgaggatgatgcagatgttgaatgg
aaatttgccaggtcgaagctgtacctcagttacttccgagagggcctcaccatgcctgtg
cctttcaacattattccttctcccaaagctgcgttttacattttaaggggtatcttcagg
cgaatctgctgctgctgctcctgtaattcagagcaaaaatatccccctttagcctccatg
tcaagcgaaaagggtgcagaggacagccagctcccttaccggcagcaggtgatcagagct
ctggtgcagcgctacatcgagtcagctcgcagggagtttgaggaggccaagaggaaagat
attggaaatcggatcactgagctgaacaaagcagtctccaggatgcacggtgaaatgaag
gtgatccagcagtttctggtggctgagggacacgtttcaaacgatgctctgaccagagat
ggctcctctgttctggggaaatacatcatcggtgccaagaacaacttcagaggttttaac
accaggcaggacgacaaaaacacatcgcttaaagtgagcgtgcaccatggaggggaaggg
atagataaagacaaggctgattcagatgctgcgcagcaggagacgagtaaacgactgaat
caggtggatgagtgcgaagaagagccgaagcatgtgacggactgcgaggtggtcaaaatg
gaggaagggcgagcaaaatctgagcagcgagacgagagggaagcagagataagagagcag
gcagaagaaaatcaaagcgaaaatggtgacaaagaggaagccacgggagggagcagcttt
gatgaagcagaagaaaaggcagagaccacacagggtgaggcagatacaaggagtgaagag
gagattaacacggggtcaaaggtgacagaaatacgcacagagacgaagcccgaacacaca
gaaagcgccacagtcagctgtgaaacgacagacacgaagaaaataatcaacaagttcaaa
gacatggagctgaaggagaggaacacagagatggggttgatgaaagggaagagattcgag
aacaacgtgagggagagagacggacagagtgggaacaaggaagtgattccgtctccaaca
ggaagcagcagctcacacgacacaggcttcgggtcacaggagggggaaggagccattgat
ggggcaccagtgaaaccttaa
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