Kryptolebias marmoratus (mangrove rivulus): 108248418
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Entry
108248418 CDS
T05608
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108248418 (supt6h)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108248418 (supt6h)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108248418 (supt6h)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
108248418 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
bZIP_2
Tex_central_region
SPT6_acidic
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
108248418
NCBI-ProteinID:
XP_024866595
LinkDB
All DBs
Position
LG13:9581010..9592488
Genome browser
AA seq
1907 aa
AA seq
DB search
MSDFIDSEAEESEEELDEKDLKPKKTQRFLEEEDEEEDVDNPEEQDEHGNLRGLIDDGDD
EGEEEEAEKSGSPVASDSEDEVRHRRKKRRADDDLDDDDLDLIEENLGVKVKRRRKKYER
VKTLEDDEEDDDEKDLIADEIFHGDGDGELEEGEAVDEPLRHPEDEEEGEDEESDIDDFI
VDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDVDPYDQGEEEEEDQEDDNW
DRPKKQTKRRLGRKSIFEYFEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDDE
LEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALSFMRNQLLEV
PFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSFQFEQISADPD
KPLADGIRPLDTADMERLKDVQTLEELGDVYHHFLLYYGRDIPKMQNAAKANKKKLKKIK
EMSEDGEEEELEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLR
DSYQRHETEQFPAEPLELAKDYVCSQFSTPEAVLEGTRYMVAMQIAREPLVRHVLRQTFQ
ERAKINTKPTKKGKKEIDEAHFAYSFKYLKNKPVKELNGEQFLKMCLAEEEGLLSIDICI
DLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSLNQFLYPQMAKELKS
KLITEAKESIVKSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSRD
TPVFCALINGDGEVSDFIRLPYFMKRRNAFREEERERKANDIENLKKFLSSKKPHVVAVA
GENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSEADFRDYPPLLR
QAVSVARKIQDPLIEYAQVCSTDDDILCLKLHPLQEHVVKEDLLNALYCEFINRVNEVGV
DVNRAIAHPHTQSLVQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHMGPKVFINC
AGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEE
ILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFN
LLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELSE
VWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVRVGMTVHCRIMKID
IEKFNVDLTCRTSDLGDKGNEWKLPKDTYYDFDTEAEDQKHEEELKKKQQRTPYIKRVIA
HPNFHNISFSQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENA
FSLGHTLWINTEEFEDLDEITARYIQPMASFARDLLGHKYFQECNGGNKEKMEELLIKTK
REKPTFIPYFISACKDLPGKFILGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWF
KDHYQEPVPGITPTNSSRTRTPASLTATPANINIADLTRAVNALPRNMTSQMFNAIAAVT
GQGQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPMMTPSYSFTTPSQ
QALGTPQYPGSTPQSSHAHAHPHLAHHGPHSSLHGHSSGTPSSSTSSRGRTPQQQQQPPP
PPGDAFSDFLGDNKLKRAAAFQTYKNYSLLTELEAGHCDHPREPRGEPYALGYPELQETR
VDSVLGPELAAHRYRPSAAAAVSAERDDSQEDAKMENGSSGYEMRYLHYQSTSGSLGNIS
TASSTCSSPPGTPAPSGKGRSPSHGGKAPGGKAKKRLDKDSDEYRQRRERNNLAVRKSRD
KAKLRNLETQHKVLELAAENDRLQKRVEQLSRELATLRNLLSATGQC
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgtccgactttattgacagtgaagcagaggagtcggaggaggagttagacgagaaggac
ctcaaaccgaagaagacccagaggtttctggaggaagaggacgaagaagaagatgtggac
aacccagaggagcaggatgagcacgggaatttgcgaggcctgatcgatgatggagatgac
gaaggagaagaggaagaagcggaaaaaagtggaagcccagtggcaagcgactctgaagat
gaagtgaggcatcgacgtaaaaagcggagagctgacgacgacttggatgacgatgatctt
gacttaattgaggaaaacttgggtgtcaaagtgaaaaggagaaggaagaaatacgaacgt
gtgaaaacgctggaagacgacgaggaagacgatgacgagaaggacttgattgcagatgag
atctttcatggggatggcgacggtgagctggaagaaggcgaggctgttgatgagcctctc
cgacacccagaagatgaggaagaaggagaggatgaagagtcagatatagatgattttatt
gtggatgatgatggccaacccatcaccaaaaagagaggcaagaagttctcaggatacact
gatgcagccctccaggaagctcaggagatttttggtggcgacttcgactttgctgacttt
gatgtggatccctatgatcagggtgaggaggaggaagaagatcaagaggacgataactgg
gaccggccaaaaaaacagactaagaggaggctggggaggaagagcatctttgagtacttt
gagcccagcgagctggaaagcagtcacatgactgaccaggataatgagatccggtccaca
gacatgcctgagaggttccagttgcgatccatccctgttaaaccggctgaggatgatgag
ctggaagaagaagctgagtggatcttcagacatgggttctccactctgaccatctccatg
caggaaagcacagactatcttgacagaggaacaacgaccaacttcagcaggaaagggccg
agcaccattgcaaagatcaaagaggccctcagcttcatgaggaatcagctgcttgaggtt
ccgttcatagctttctacagaaaagaatatgtggagccagaactaaatatcaatgatctg
tggaaggtgtggcaatgggatgaaaagtggactcagctgaagaccaggaagcagaacctg
acccgtctgtttcagaagatgcagtccttccagtttgagcagatatctgctgatcctgac
aaacctttggctgatggcattcgtcctttggacactgctgacatggagcggctgaaagat
gtgcagactctagaagaactgggtgatgtgtaccatcacttcttgctctactatggacga
gacattcccaagatgcagaacgctgcaaaagccaacaagaagaagctcaagaagattaaa
gaaatgtcagaagatggtgaagaggaggaacttgaagtcgaagaagaggaggagcagaaa
ggacctgacctgaagttggcgtctcgtagagacatgtacagcatctgtcaaagcgtagga
cttgatggcctggctaaaaagtttgggttaactccagagcagtttggagagaatctgaga
gacagttaccagcgtcacgagacagagcagttccccgccgagccgctggagctggcaaaa
gattacgtttgcagccagttctccactcctgaggcagtgctggaaggaacccgctacatg
gtcgccatgcagattgctcgggaacctctggtcaggcacgttctccgtcagaccttccag
gagagggccaagatcaacaccaaacctacaaagaagggcaaaaaggagatagacgaggct
cattttgcgtattccttcaagtatcttaagaacaagcctgtaaaggagctgaatggggag
cagtttttgaagatgtgcctggcagaggaggagggccttctttccattgatatctgtata
gatctaataggtgtcaaagggtatgctggggaccagacgtacttcgatgagatcaagcag
ttctactacagagacgagttcagtcaccaggtccaggagtggaacaggcagcgaacttta
gccatagagagatctctcaatcaattcctttaccctcagatggccaaggagctcaaaagc
aaactgataactgaggccaaagagagcatcgttaagtcttgctgtcgccggttgtacaac
tggctcaaggtggctccttacaggccagatcagcaggttgaggaagacgatgacctgatg
gatgagagtcagggaaaaggcatacgagtgttaggtgttgcctatgcaccgagcagagac
acaccagttttctgtgctttgatcaacggggatggagaggtgtccgacttcattcgcctg
ccctacttcatgaagaggaggaacgctttcagggaagaggaaagagagaggaaggcaaat
gacattgaaaatcttaagaagtttctctcaagcaagaaacctcacgtggttgctgttgct
ggggaaaaccgagacgctcagatgatcatggaggatataaagaggaccatcagtgagctc
gaacaggagtcgtctcttccggctgtaggagtggagctggttgacaatgaactagccact
ctttacatgaacagcaagaagtctgaggctgattttagggattatcctccattgctgcga
caggctgtgtcagtagccagaaagattcaggatcctctgatagagtatgctcaggtctgc
agcactgacgatgacattctgtgtctcaaattacacccactgcaggaacacgtggtgaag
gaggatttgctcaacgctctttactgtgaatttatcaaccgtgtcaacgaggttggtgtt
gacgtgaacagggcgatcgcccaccctcacactcagagtttggtccagtacgtctgtgga
ctggggccaaggaaggggacccaccttctcaagattctgaagcagaacaacacacgtctg
gaaaacagaacgcaactcgtcacaatgtgtcacatgggacccaaagtttttattaactgt
gccggtttcatcaagattgacacagcatcacttggtgacagtacggactcctacatagag
gtactggatggttctcgtgtccaccctgagacgtatgagtgggctcgtaagatggccgtt
gatgccctcgagtatgacgagtctgcagaagatgcgaacccagctggagcactggaggag
atcctggaaaacccagaacgtctcaaagatctggacctggatgcctttgctgaagagctt
gagagacagggttatggcaacaagggaataacactttatgacatccgtgcagagctgagc
tgtcggtacaaagacctcagagttccctacagagtccccaacactgaggaggtcttcaat
ctgctcacaaaggaaactccagaaaccttttatattggtaagctcataactagtgtggtc
actggtatcgctcaccggcggcctcagggagagagttatgaccaggccattcggaatgat
gctacaggcctgtggcagtgtcctttctgccagcaggacaatttccctgaactgagtgag
gtgtggaatcattttgacagcggctcgtgtcccggtcaggctatcggggtcaggagcaga
ttagataatggcgtccagggatttattcccaccaagtttctcagtgataaagtggtcaaa
catcccgaggagagggtcagggtgggcatgactgttcattgccgcatcatgaaaatcgac
attgagaaattcaacgtcgacctgacgtgtcgcacctcagacctgggagacaagggcaac
gagtggaagctgcctaaggacacctactacgacttcgacacggaggctgaggaccagaaa
cacgaggaggagctcaaaaagaaacaacaacgaacaccatatataaagcgtgtgatcgcc
caccccaacttccacaatatcagttttagccaggcggagaagatgatggagaccctggac
cagggggacctcatcatcaggcccagcagcaaaggagagaaccatctcaccgtcacctgg
aaagtggctgatggcatctatcagcacgtagacgtaagagaagaaggcaaagagaacgca
ttcagtttaggccacactctctggatcaataccgaagagtttgaggatctggatgaaatc
actgctcggtacattcagcccatggcctcatttgcacgagatctgctgggacacaaatac
ttccaggaatgtaacggaggaaacaaagagaaaatggaggagttattgatcaagacaaag
agggagaagccgacattcattccttactttatttcagcgtgtaaagatctgccgggaaaa
ttcattttgggctaccagcctcgtggaaaacctcggattgagtatgtgaccatcacccca
gatggtttccgttaccgctcacagatatttcccacagtgaatgggctcttccgttggttt
aaggatcattatcaggagcctgttccaggcattactccaaccaacagcagccgaacacgg
actcccgcatctctgactgcaactccagccaacataaatattgcagacttgactcgagcc
gtcaacgccctcccacgcaacatgacttctcagatgttcaacgccatcgccgcagtcaca
ggccaaggccagaaccccaacaccacccctgcacagtggggctccagccagtatggctac
ggcggcagcacaggaggagggggagggagctcgtctgcttatcatgtatttgccacgcct
cagcagcccatggcgacacccatgatgacgcccagctactccttcacgacaccaagccaa
caggccctgggcacgccacagtatccaggctccacccctcagtcttcccacgctcatgcc
cacccacacctggcacatcacggcccccacagcagtcttcacggccactcgtctggcacg
ccgtcgtcctccacctcatcccgaggacgaacaccgcagcagcagcagcagccgccgccg
ccgccgggggacgccttctccgacttcctcggggacaacaagctcaaaagagccgccgct
ttccagacctacaagaactactcgctgctcaccgagctggaggcgggtcactgcgaccac
ccgagggagccccgcggggagccgtacgcgctgggttaccccgagctgcaggagacccgg
gtggacagcgtcctcggccccgagctcgcggcgcaccgctacagaccgtccgccgccgcc
gccgtctccgccgagagggacgacagccaggaggacgcgaagatggagaacggctcgtcc
gggtacgagatgaggtacctgcattaccagtccacgagcgggagcctggggaacatctcc
accgcgtcgtcgacctgctccagcccgcccggcacacctgccccgtcaggtaagggcagg
tcgccgtcgcacggcggcaaagcgcccggcggcaaggcgaagaagcgcctggacaaggac
agtgacgagtacaggcaacggagggagaggaacaacctggccgtgaggaagagcagggac
aaagccaaactacgcaacttggagacgcagcacaaggtgctggagctggccgcggagaac
gaccgtttacagaagcgcgtggagcagctgtccagagagctggccaccctgcgcaacctg
ctctctgccaccggacagtgttag
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