Kryptolebias marmoratus (mangrove rivulus): 108248438
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Entry
108248438 CDS
T05608
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108248438
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
108248438
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
108248438
NCBI-ProteinID:
XP_017292699
UniProt:
A0A3Q3BMJ6
LinkDB
All DBs
Position
LG2:complement(9678451..9701575)
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AA seq
2126 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNIFCLADLTGIKWRRFVWQGPTSSPILFPVTEEDPILCSFSRC
LAADVLSVWRRHHTRGRRELWLFWWGDDPSFAELIHNELSSEENGEWDSGLSYECRTLLF
KAIHNLLERCLMNRGFVRIGKWFVKPYQKEEKIINKSEHLSCAFTFFVHGDSNVCTSVEI
AQHQPLQRLGEEHLSLAQQSSSPLQVILSPYGLNGTLTGQAFKMSDHPTQKLIEEWRQFY
PICPNPKEVQEDKMDDADWEDDSLAAVEVLVAGVRMVYPSCLVLLPLSDLPAVVPQGSTT
TPGSQCGAQQGQATHRDSAMSSVTLTPPTSPEEAHTDYQPAHRWLKLSSASDCYNSNNTL
HGGKIPRRLAGQMVESVWQEYNINRTGSKRKITNLTNGACEEESDNTGLWDFVESTCRPT
CNCSRHKNQKQRSSSTSGHPPSSGQPAQPAPKHKLGEKLEKAEKQQRRPQTPFHHRNSVS
EEQPLEPQNPRLCSRPQEEGSYPSLHHVDTVPPKAPTLHSHGPPADLVGSPPPPPLSPHP
CEHVESDLIPGTIKNSSTPIHQAFYPPSVEPCLMPQKSSSEEPQIESVPMPLSFPSAYNE
SLEPTVFVGSAVNPIEDSTYNPWKYFNLPRKKNSSFPPPPLPVDKTRDDCGRATDGVVSV
TELMCNSSQTLKVSQDLVKAYSQRRNSHLASSPGDRERSQVPDPYAFVEDEEDGFTEKKD
KSGTEKEGNKKQKLDEATGTSADDGQGPSGSKPSASTSLFHENDLAVSYSDLEKIFNSDE
DDLVSGSRRAGVGIEDDINCKKTKPTLLDRLPCVSPVDLHKMFPTPPSLEQQGYSPMNSG
SNDSLETGSSLTVLDVSQLNSHFKVEVEEGFCSPKPSEIKDFSFVYKPETCQSIIGCSMY
APLKTLPSQCLSPIKLPENCVYTPSWTMGKMELIPPVPGVSLLTKDSNVPSVEPDYSQTY
TPQTHTPFMSSSAPPSNSGAGILPSPATPRFSVPTPRTPRTPRTPRGPSSVQGSLKYDNA
DLYSPASTPSTCRPLSSVEPATVPSIPEAHSLYVTLILSESVMNLFKDCNFDSCCVCVCN
MNIRGADVGVYLKDNGEAQYLCTCGFSAVTNRRFGQSAGLFLEDELDVVGRGSDASRDTE
RCFDELRGSLKEKPPDELILLLQDRCTNPFAPIAGVEYSKPSSALTSFLRVEERDCYNDC
YMALEHGRQFMDNMSGGKVDETLVKSTSLHQWPKCQSADMSKLFSQDVLRVLLSLQPVLQ
DTIQKKRSLRSWGVQGPLTWQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPF
GLPYWEKLLLDPFGSQRDVGYVVVCPENEALLRGAKTFFKDLGVMYEACQLGQHRPICRS
HPEGILTVGTTEGRSMTEQPLSDWFLKMAAREGNNEAFNKLKLFAQVCRYDLAPNLSELP
LDSSLLSQRNPTTVPPSSSSFSSSSSSQTSNSSSNSSGLQSANTTSAGSAQTSQVNSTPP
SSSSSSSSSGSQTMGAMASGKPSSYLPFGSGGLQGGATQNGPQSNSQGAGSLAENGSSQP
QGPTETPESTMERDKVGKPTDGESHAVSYPPAIVVYIVDPFSYEDADREVHSSTYTLGLL
RCYMEMLPFLPAHIRNAISVQIVPCQYLLQPVHSGERHVYSQHLKSLAFSVYTQCRRPLP
GSTNFKALTGFGPGLAIDMALKNPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKY
NVLFVGYCLSHDQRWLLASCTDQHGELLESCIISIDVPNRARRKKGSARRLGLQKLWEWC
VGLVQVTSLPWRVVIGRLGRMGHGELRDWSILLSRRNLQSLSKRLKETCRMCGISAADTP
SILSACLVAMEPQGSFVIMPDSVSTGSVFGRNTALNMQTSQLSTPQDTSCTHILVFPTSA
MVQVNTNTSEPIDISFNPINPDGSEVMGIFDLFGNDMDHDMVDPDLINILPNSPTTSPVH
SPGSHYHQGGDGSKGPSADRMESHEEALNILQQPMALGYFISTAKAGPLPDWFWSACPQA
QNQCPLFLKASLHLHVSSVQSDELLHSKHSHPLDSNHTSDVLRFVLEQYNALSWLTCNPA
TQDRRSCLPVHFVVLTQIYNFIMNML
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtgctttgtaccaaacggggccagtttggaggactgccactccaacatcttc
tgcctggctgatttgactggaataaaatggcggcgtttcgtgtggcaaggacccacctcg
tcgcccatcctgttcccggtgaccgaggaggaccccatcctgtgtagcttcagccgatgc
ctggcagcagatgtgctgagtgtgtggagaaggcaccacacccggggtcgcagggagctt
tggcttttctggtggggggatgaccccagtttcgcggagcttatccacaatgagctctcg
agtgaagagaacggggagtgggacagcggcctgtcctacgagtgtcgaacgctcctcttt
aaagccatccacaacctgctggagcgctgcctcatgaaccgcggcttcgttcgcatcggc
aagtggtttgttaagccataccagaaggaggagaagatcatcaataaaagcgagcacctg
tcttgtgcgttcaccttcttcgttcacggcgacagcaacgtgtgcacgagtgtggagatc
gcccagcatcagcctctgcagagactcggcgaggagcacctcagcctcgcgcagcagagc
tccagccccctgcaagtcatcctgagcccgtacggcttgaacgggactctcaccggccaa
gcctttaagatgtcagatcaccctactcagaagctcatagaggagtggaggcagttctat
cccatttgtcccaatcccaaggaggtgcaggaagacaagatggatgatgcagactgggag
gacgactccctggcagctgtggaagtcctcgttgcgggagtcaggatggtctacccgtcc
tgcctggtgctcctccccctgtcggacctccctgctgtggtccctcagggctcaaccacc
accccagggagccagtgtggcgcccagcagggtcaggccactcacagggactccgccatg
tcgtctgtcaccctgactcctccgacgtcaccagaagaggctcacaccgactaccagccc
gctcacaggtggctaaagctgtcctctgcgtccgattgctacaactcgaacaacactctg
catggggggaaaatcccccggaggctggccggccagatggtggagtcggtgtggcaggaa
tataacatcaaccgcacagggagcaagaggaagataacaaacttgacaaacggagcgtgt
gaggaggagtcggacaacactggactctgggattttgtggaatcaacctgcagaccaacc
tgcaattgttcaaggcataagaatcagaagcagcggtccagcagcacctcaggacaccca
ccttcctcaggccagcccgcccagccggcccccaagcacaagctgggcgagaagctggaa
aaggcagagaagcagcagaggaggccgcagacgccgtttcaccaccgcaactcggtgagc
gaggagcagcccctggagccgcagaacccgaggctctgctcgagaccccaggaggagggc
tcgtatcccagcctgcaccacgtggacacggtgcctcccaaagcgcccacgttgcactcg
cacgggccgcccgccgacctggtggggtccccgcctcccccgcctctcagcccgcatccc
tgtgaacacgtagagagcgacctaatcccagggaccattaagaactcttccacgcctatt
caccaagcgttctacccgccgtcggtggagccctgtctgatgccacagaaaagctcctcc
gaggagccgcagatagagagcgtgcccatgccgctgtccttcccctcagcctataatgaa
agcctggagcccaccgtgttcgtaggctcagctgtgaaccccattgaagactccacctac
aacccctggaagtatttcaacttacccaggaagaagaactccagcttcccgccacctccg
ctgcctgtggataaaacacgagacgattgtggcagggcaacggacggcgtggtctctgtc
accgagttgatgtgcaactcctcgcagaccctgaaggtgtcccaggacctggtcaaggcg
tacagccagcggagaaacagccatctcgcctcgtcccctggggacagagagcgcagtcag
gtaccggacccttacgcctttgtagaagacgaggaggacggctttacggagaagaaggac
aagtctggaactgagaaggaaggcaacaagaagcagaagttggatgaagcaactggaact
tctgccgatgatggtcagggtccatcaggcagcaaaccttcagcctcaaccagcctcttc
catgaaaacgacttggctgtttcttacagcgacttggagaagatatttaactccgacgaa
gatgatctcgtgtctggatccagaagagctggagttggtatcgaagacgacattaactgt
aaaaaaactaaaccaactctcttggatcgtctgccttgcgtcagcccggtagacctgcac
aagatgtttcccaccccgccctccctggagcagcagggctactcccccatgaactccggg
agcaacgacagtctggagacgggctcgagtctcaccgtgttggacgtcagccagcttaac
agccacttcaaggtggaggtagaggagggtttctgcagcccaaagccatctgagattaag
gacttctcctttgtgtataagccagagacatgtcagtctatcatcggctgttccatgtac
gcccccctgaagacactacccagccagtgtctgtcgcctatcaaactgccagaaaactgt
gtgtacacgccgagctggaccatgggcaaaatggaactgatacctccagtgccaggtgtc
agtctcctcaccaaagacagcaacgtcccgagtgtggagccagactacagccagacctac
acccctcagacccacacgcccttcatgtccagcagcgcaccccccagcaacagcggcgcc
ggcatcctgccttccccggccacgccgcgcttctccgtgcccacgcctcgcacgccacgc
actccccgaacgccccgcggcccgtccagcgtccagggctccctcaagtacgacaacgcc
gacctgtactcgccggcgtccacgccctccacctgccgaccgctcagctccgtggagccg
gccaccgtgccctccatccccgaggcgcacagcctctacgtcactctcatactttccgag
tccgtcatgaacctcttcaaggactgcaacttcgacagctgctgcgtgtgcgtctgcaac
atgaacatcaggggcgccgacgtgggcgtgtacctcaaggacaatggcgaggcccagtat
ctgtgcacttgtggcttcagcgccgtgaccaaccggcgctttggccagtcagccgggctg
tttctggaggacgaactggacgtggtggggcgtggctcggacgccagccgggacacggag
cgctgcttcgatgagctgcgaggcagcttgaaggagaaacctccagatgagctgatcctg
ctgcttcaggaccggtgcaccaacccgttcgcccccatcgcgggcgtggagtactccaaa
ccgagctcggcgctgacttcgttcctgcgggtcgaagagagggactgttataacgactgc
tacatggcgctggagcacggcaggcagttcatggacaacatgtcgggaggaaaagtcgat
gaaacactagtgaaaagcaccagccttcaccagtggccaaaatgtcaatcagcagacatg
agcaagctgttctctcaggacgtcctgcgagtgttgctgtccctccagcccgtgctgcag
gacaccattcagaagaagaggagtttgcgctcttggggtgttcagggacccctcacctgg
cagcagttccacaaaatggctgggaggggttcatatggtacagatgagtctccagagcct
ctgcccatcccgacctttctggtcggttatgaatatgatttcgtagtgctctctcctttc
gggttgccctattgggagaagctgctcctggatccgttcggttcccagagggatgtggga
tacgtcgtcgtctgtccagaaaacgaagcgctgctccgtggagccaagacctttttcaaa
gacctgggtgtcatgtacgaggcgtgccagctggggcagcacaggcccatctgcaggagt
cacccagagggtattctgacggtcggcaccacagaaggaaggagcatgacagagcagcct
cttagtgactggttcctcaagatggctgctagagaaggaaacaatgaagcctttaacaaa
ctcaaactctttgctcaagtctgtcgttatgatctagctccgaacctttctgagctgcct
ttggatagttcccttttgtcccagcgcaatcccaccacagtccccccctcctcctcgtcc
ttctcctcttcctcctcctcgcagacctccaactcttccagcaactcctcaggactccag
agcgccaacactaccagcgccggctcggcccagacttcgcaggtcaacagcacccctccc
tcctcctcttcctcctcctcctcgtcgggctcccagaccatgggggccatggcctcaggc
aagccgagctcctacttgccgtttgggtcagggggcttgcagggcggcgctactcagaac
ggaccacagtccaactctcaaggtgcgggcagcctggctgaaaatggatccagtcagcct
caagggcccacagagacgccggagagcaccatggagagagacaaagtgggcaaaccaaca
gacggcgagtcgcacgccgtttcctacccgcctgccatagtggtttacatcgtcgacccg
ttcagctacgaagacgcagacagagaggttcactccagcacctacaccctgggcctgctg
cgctgctacatggagatgctcccgttcctacccgctcacatccgcaacgccatctcagtg
cagatcgttccctgtcagtacctgctgcagccggtgcacagcggcgagcgtcacgtctac
agccagcacctgaagtcgttggccttctccgtgtacactcagtgccgccggcctctgcct
ggctccaccaacttcaaggccctgaccggattcgggcccgggctcgccatcgacatggcg
ctcaagaacccagagcggcccgagtgtctgcgtctgtacacgccacccttcattctggct
ccggtgaaagacaagcagaccgagctcggcgagacgttcggcgaggcctcgcagaagtac
aacgtcctgtttgtcggctactgcctgtctcatgaccagcgctggctgctggcgtcctgc
accgaccaacatggggagctgctggagtcctgcatcatcagcatcgacgtacccaacagg
gcgcgcaggaaaaagggctccgccagacggctgggtttacagaagctgtgggagtggtgc
gtcggcctggttcaggtcacctctctgccatggagggtggtgattggacggctcggcagg
atgggacacggcgagctgagagactggagtattctgctgagcaggaggaacttgcagtcc
ctcagtaagcgcctgaaggagacgtgtaggatgtgtggcatctccgccgcggacacgccc
agcatcctcagcgcctgtctggttgccatggagccacagggttcctttgtgatcatgccc
gactctgtgtcaacgggttcggtgtttggtcgcaacaccgcgctaaacatgcaaacgtcg
cagctgagcacacctcaggacacgtcctgcacgcacatcctggtgttccccacctcggcc
atggttcaggtcaacaccaacacttccgagcctatcgacatcagcttcaaccccataaac
cccgacggctccgaggtaatgggcatctttgatctgtttggcaacgacatggatcatgac
atggtggatccagacctcatcaacatcctgcccaactccccgacaacctctcctgttcac
tctcctggttcacactaccaccaaggaggagatggaagcaagggcccgagtgcagatcgt
atggagtcccacgaggaggctctgaacatcctgcagcagccgatggccttgggttacttc
atctccacggcgaaggccggaccgctgcccgactggttctggtcggcctgtcctcaagcc
cagaaccagtgcccgctcttcctcaaggcctctctgcacctccacgtgtcttctgtccaa
tcagacgagcttctgcacagcaaacactcccatcctctggactctaaccacacctctgat
gtgctcagattcgtcctggagcagtacaacgccctctcctggctgacctgcaaccccgcg
acccaggaccggcgctcctgtctgcccgttcacttcgtggtgctcacacagatctacaac
ttcatcatgaacatgctctga
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