Kryptolebias marmoratus (mangrove rivulus): 108248456
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Entry
108248456 CDS
T05608
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04141
Protein processing in endoplasmic reticulum
kmr04210
Apoptosis
kmr04217
Necroptosis
kmr04218
Cellular senescence
kmr04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108248456 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
108248456 (capn1)
04217 Necroptosis
108248456 (capn1)
04218 Cellular senescence
108248456 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108248456 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108248456 (capn1)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
108248456 (capn1)
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C2: calpain family
108248456 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
108248456
NCBI-ProteinID:
XP_017292730
UniProt:
A0A3Q3BN88
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All DBs
Position
LG7:14537954..14577191
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AA seq
706 aa
AA seq
DB search
MVESHIYATGMAAKLRSQWDRDEGLGQNNNAVKFLCQDYQSLRAQCLRSGKLFEDSLFPA
SPSSLGFNELGPRSSKTSGVRWMRPTEFCKRPEFIVDGASRTDICQGALGDCWLLAAIAS
LTLNDTLLHRVVPHGQSFQQQYAGIFHFQFWQFGEWMEVVIDDRLPVKDGKLLFVHSAEG
TEFWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMFELRKAPSDLYSIISRAVE
RGSLLGCSIDITSKFDMEAVTFKKLVKGHAYSVTGVDEVVYRGNLTKLVRIRNPWGEVEW
TGPWSDESREWDSVDRSVRSRLQNRSEDGEFWMSFSDFLREFSRLEICNLTADALQNSQM
KKWSSSLFQGEWRRGSTAGGCRNYPATFWLNPQFKISLQHPDTPGQRDSSFLVALMQKDR
RKKRREGEDMETIGFALYEVPDEFSGRSGVHLKRDFFLTHASSARSEQFINLREVSSRLR
LPVGEYIVVPSTFEPHKEGDFVLRVFSEKPANSEELDDKVVADIPAETQLDESQIDAGFK
NLFRQLAGPDMEISVTELQTILNRIISKHKDLKTDGFGKEACRSMINLMDTDGSGKLGLT
EFHVLWEKIKRYLTIFRQFDLDKSGTMSSYEMRMALESAGFKLNNHLFQLIILRYTEEDM
AVDFDNFVNCLVRLETMFKTFKTMDTDGDGQISLNFFQWITLTMFA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggtggagtcgcacatttatgccaccggcatggccgccaagctcaggagccagtgggat
cgggacgaaggcctgggacagaacaacaacgcggtgaagttcctgtgtcaggactaccaa
tccctgagagcccagtgcctccggagcggcaagctgtttgaggacagcctgttccctgct
tctccgtcgtctctgggattcaacgagctcggtccccggtcctccaagacctccggagtc
cgctggatgaggcccacggagttctgcaaacggcccgagttcatcgtagacggagcttct
cgtaccgacatctgtcagggagctctgggggactgctggctgctggcagctatcgcctcg
ctgaccctaaacgacaccctcctccacagagtggttcctcacggacagagcttccagcag
caatatgctggcatcttccactttcagttctggcagtttggcgagtggatggaggtggtg
attgatgaccggctgccagtaaaggatgggaagctgctgttcgtccactcggcagaggga
accgagttctggagcgctctgctggaaaaggcttacgccaagctgaacggctgttacgag
gctctgtcgggtggcagcacgtcagaaggctttgaggacttcacaggcggcgtgacggag
atgttcgagctgaggaaagccccctctgacctgtacagcatcatcagcagggccgtagag
aggggctcgctgctcggctgctctattgacatcaccagtaagtttgacatggaggctgtc
acgtttaagaagctggtgaagggacacgcctactctgtgacgggtgtggacgaggtggtc
tacagaggaaatctgacgaagctggttcgcatcaggaacccttggggggaggtggaatgg
accggaccctggagcgacgagtccagagagtgggacagcgtggatcgttctgtcagaagt
cggctacaaaaccgcagtgaagatggagaattctggatgtctttcagcgacttcctgcgg
gagttcagccgcctggagatctgcaacctgacggcagacgccctgcagaacagtcagatg
aagaagtggagctcgtcgctcttccagggggagtggaggagaggcagcacggctggaggc
tgccgcaactacccagcgaccttttggctgaatcctcagttcaagatcagcctgcagcac
ccggacacccccgggcaacgggactccagcttcctggtcgccctcatgcagaaggaccgc
aggaagaaacgacgggagggtgaagacatggagaccatcgggttcgctctgtacgaggtt
ccagatgagttttctgggaggtcaggcgtccacctgaagcgggacttcttcctgactcac
gcctccagcgctcgctcagagcagtttattaacctgagggaggtcagctcgcggctgcgc
ctcccggtcggggagtacatcgtcgtcccctccacctttgagccacacaaggagggcgac
ttcgtcctcagggttttctctgaaaagcctgcgaactcagaggagctggatgacaaagtt
gtggcagatattccagcagagactcaactggacgagagccagattgacgcaggcttcaag
aatctcttcagacagctggccggacctgacatggagatcagcgtcacggagctgcaaacc
atcctgaacaggatcatcagcaaacataaggacctgaagacagacggctttggtaaagaa
gcgtgccgcagcatgataaacctcatggatacggacggcagtgggaagctgggcctcacg
gagttccatgttctctgggaaaagatcaaacgatacctgactatattcaggcagtttgac
ttggacaagtctggcaccatgagctcctacgagatgaggatggctctggaatctgcaggt
ttcaagctcaacaaccacctgttccagctgatcatcctgcgttacaccgaggaagacatg
gctgttgactttgacaacttcgtcaactgtctggtccgactggagaccatgttcaaaaca
tttaagaccatggacacagacggagacggtcaaatatcccttaacttctttcagtggatt
actctgacaatgtttgcctga
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