Kryptolebias marmoratus (mangrove rivulus): 108248545
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Entry
108248545 CDS
T05608
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108248545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108248545
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108248545
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
108248545
NCBI-ProteinID:
XP_017292870
UniProt:
A0A3Q2ZZL0
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Position
LG2:complement(2809808..2819022)
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AA seq
760 aa
AA seq
DB search
MSKKDKGDTMDREEPNKGQGKEEGGNDEGLDWLLKNDDSEISPVPMDSNISLSRQHSAGV
DSTYSSKFTRDKVFKAASQGDKTQLIGLLEYLQVNEKQLTSPAFTDETNGKTALLKALLN
LKDGKNDTVEVLLDTAEKTGDLEKLINASYTDPCYKGQTALHVAIERRSFDHVKLLVQKG
ADVQAKANGSFFQHKSRLGFYFGELPLSLAACTNQPEIVSFLMENSFRRADATAKDSLGN
TVLHTLVVIADNTKENTEMAARIYNEILIQHYKLEKNREVQLESIENNEGLTPLKLAAKL
GRIGLFRHMLNQEFVDEETRPLSRKFTEWVYGPVHSSLYDMSSIDTTENNSVLEIIVFGS
EIPNRPEMLQIEPLRSLLHDKWERFAFKLFLMNLGIYLMYLTIFTTVAFYRKDGQPPFPV
ANTPADHLRCVGEIISVLGAVRFLYKTIIIFKKNPPNIRALFTDGFSEILFFLQAALLLV
SAFLYFCGRREYVGLLVLSLALAWMNVLYYTRGSRQLGMYNVMMQRMILGDLLHFLCVYS
VLLFGFSAAVVTLIDDSPVDITNDSLTRGRSFDVETFKCRKPSYNDIRFTTLELFKFTIG
MGDLEFTDHVQYKEVFYILLISYIALTYILMLNMLIALMGNTVEKISEQSETIWNLQRAF
TILDMERTLPRCLRRKLQSRVSEIVCFGNGQDKCRRFVRVTETNWKKWRSDLGVKLKEDP
ANQLTEEQTLSEASGTSWNISQLLERVRARRRQHQQSHVL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaggacaaaggagacacaatggacagagaggagccaaacaaaggccaagga
aaggaggagggaggaaacgatgaaggccttgattggcttcttaaaaacgatgattctgag
atatctcctgtgcctatggatagcaacatctctctgtcaaggcagcactctgctggtgtt
gacagcacatacagctctaaattcacaagggacaaggtgtttaaagcggcatctcaagga
gacaaaacacagcttattggcctgcttgaatacctgcaagttaatgagaagcagctcaca
agcccagcttttacagatgaaacaaatggaaaaacagcactcttgaaagctttgttgaac
ctgaaagatggaaaaaatgacacagttgaagtcctccttgatactgcagagaaaactggg
gatttagaaaaattaatcaatgcgtcttatacagacccttgctataaaggtcagacagct
ttgcatgttgccatagagaggaggagcttcgatcacgtaaaactgctggtccagaaagga
gcagacgtgcaagcaaaggccaatggctcatttttccagcataaatcaagactgggcttt
tattttggggagcttcctctgtcactggctgcctgcacaaaccagccagaaattgtgtcg
tttctcatggaaaactccttcagaagagctgatgcgacagccaaagactcattaggaaac
acggtgctgcacaccttggtggtcatagcagacaacacaaaggaaaacacagaaatggct
gcaaggatatacaatgaaattcttattcagcactacaagcttgagaaaaacagagaggtt
cagttggaatctattgaaaataacgaaggtctgactcccctgaaattagctgccaagctc
ggcaggattgggctattcaggcacatgctgaatcaagaattcgtggacgaagagacgagg
ccgctgtcgaggaagttcacagaatgggtttatgggccggttcactcttcactttatgac
atgagctccatcgacaccacggaaaacaattctgtgttggagataatcgtctttgggagt
gagataccgaatcgtcccgagatgctccagattgaacctctgcgcagtcttcttcatgat
aaatgggagaggtttgcttttaaattattcctaatgaacctggggatttatttgatgtac
ctgaccatcttcaccactgtggctttctacaggaaggatggacagccaccatttcctgta
gcaaacactccagctgaccacctccgttgtgttggtgagatcatcagcgtcctgggagca
gtcaggtttctctataagacgattatcatcttcaagaaaaaccctccaaacataagagct
ctgtttactgatggattcagtgaaattctcttttttctgcaggcagccctcctcctggtg
tctgcctttctgtacttctgtgggcggagggaatacgtcgggctcctggtgctgtctcta
gctcttgcttggatgaatgttttgtattacacaagagggtccaggcagctggggatgtac
aacgtcatgatgcaaagaatgattctgggtgacctgttacactttctttgtgtctacagc
gtcttgctttttggattttctgctgccgttgttactcttatagacgactcacctgtggat
ataacaaacgactctctgacacgaggaaggagctttgacgttgaaacattcaagtgcagg
aagccgagttataatgacatacgttttacaacgctggaattgttcaagttcactatcgga
atgggagatctggagttcactgaccatgttcagtacaaggaagttttttacatcctgctc
atctcttacattgctctcacctacatcctgatgctcaacatgctcatagctctgatgggg
aacacagtcgaaaaaatctcagaacaaagtgagaccatctggaacctgcagagagccttc
acaattctggacatggagaggactcttccgaggtgcctgaggcgtaagctgcagtccaga
gtgtcggagattgtttgctttggaaacggtcaggataagtgtcgaagatttgtcagggta
actgaaacaaattggaaaaaatggaggtcggatctcggtgtgaagctgaaggaagatcct
gcgaatcaattaacggaagaacagactctcagtgaagcttctgggacttcgtggaacata
agtcagcttctggagagggttcgggcccgacgacgccaacatcagcaaagccatgttctg
tag
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