Kryptolebias marmoratus (mangrove rivulus): 108248546
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Entry
108248546 CDS
T05608
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108248546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108248546
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108248546
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Ion_trans
Motif
Other DBs
NCBI-GeneID:
108248546
NCBI-ProteinID:
XP_024866642
UniProt:
A0A3Q2ZJM9
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Position
LG2:complement(2823901..2839410)
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AA seq
780 aa
AA seq
DB search
MDKTDISEMDTIVPIGPMESPESQPPTIKPKTTNNIKEYTKDALFKAASEGYVSQLDGLL
EFLQRNEKKLIDFRESDGKTVLTKALLNLKDGKNDTIEFFIDTVEKNEDLKEFINAPFNN
ETDAEGQTALHIAIERRNLEYVKLLVEKGADLNAKASGPFFQRHYEGGFYFGELPLSLAA
CTNQPEIVSFLMNNPKNKADATAQDSRGNTVLHALVIATDKETENMTENTENITKLYDYI
LTEHYKSEKSKKSEKNQQDELESVETSDCQTLLNSYSNKSESEKTEVSYLESIENNKGLT
PLKLAAKLGRFGMLKHIMNREFPHEETKLLSRKFTEWSYGPVHCSLYDISSIDTIKTDSV
LDIILFRSKKPNRPQMLQIEPLHSLLRDKWDYYAYIIFWIHFVFYLIYLAIFTSVAFHRK
DGQPPFAVENTPSDIFHCIGQIISVLGAIWFLSKSIQNIKRNALYKKGLLINGFVELLFF
LQASLLLVAVVLYFCGREEYVGLLVLSLALAWVNTLYYARGSKQLGIYNVMMQRMILGDL
FQFLCIYSVLLFGFSAAVVTLMDDRLADKKNITTSTLIPDKCGKPSYSEFHFALVEMFKF
TFGMGNLDFTDDVEYKEVFYILLVGYIVLTYILMLNMLIALMGNTVENTTEQSENIWYLQ
RAFAVLDMERSLPMQLRRKLNFSILKKDEDKEKDKNNKGKKKNEDKNKDPSFFRVIEKDW
KKWKSGLRKQLKENPVKTVQKRNLHGIVKDFHRRLRNDQPDGNGNHNNKDGSLLEENIPK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggataaaacagacatctcagagatggacacaatcgttccaattggcccaatggagtca
ccagaaagtcagccccccacaataaaaccaaagactacaaataatatcaaagaatacaca
aaggatgcactgtttaaggcagcatctgaggggtacgtatcgcaacttgatggcctgttg
gagttcctgcaacgcaatgagaagaaacttatagattttagagaatccgatggaaaaaca
gtcctcacaaaagctttgctgaacctgaaagatggaaaaaatgacacaattgaattcttc
attgacacagtggagaaaaatgaagatttaaaagagtttatcaatgcacctttcaacaat
gaaactgatgccgaaggtcagacagccctacacattgccatagagaggagaaacttggaa
tacgtgaaactgctggtcgagaaaggagcagatttgaatgccaaagccagtggcccgttt
ttccagcgtcactatgaagggggcttttattttggggagcttcctctgtcactggctgca
tgcacaaaccagccagaaattgtgtcatttctcatgaacaaccctaaaaacaaagctgat
gcgacggcccaagactcacgaggaaatactgtgctgcacgctttggtgatcgcaacagat
aaagaaacagaaaacatgacagaaaacacagaaaacatcacaaagctgtatgattacatt
cttactgagcactacaaatctgagaaatctaagaagtctgagaaaaaccaacaagatgag
ttggaatctgttgaaacatctgattgtcaaactctcctaaactcatatagtaacaagtct
gagtctgagaagactgaagtcagctacttggaatccatcgaaaacaacaaaggtctgact
cctctgaaactggctgccaagctcggcaggtttgggatgttgaagcacataatgaatcgg
gaattcccgcatgaagagacgaagctgctgtcgaggaagttcacagaatggtcttatgga
cctgttcactgttcactttatgacatcagctccattgacaccattaaaacagattctgtg
ctggatataatcctcttcaggagtaaaaagccgaatcgtcctcagatgcttcagatcgaa
cctctgcacagtcttcttcgtgataaatgggactactatgcttacataatattctggata
cattttgtgttttatttaatttacctggccatcttcacctctgtggctttccataggaag
gatggacagccaccatttgcagtcgaaaacactccatctgacatcttccattgtattggt
cagatcatcagtgtcctgggagcaatctggtttctcagtaaatcgatacaaaatatcaag
agaaatgctttatacaaaaagggtctgctcatcaatggattcgttgaattattgtttttt
ctgcaggcatccctcctcctggtggcagtagttctgtatttctgtggacgggaggaatat
gtcgggctcctggtgctgtctctagctcttgcctgggtgaacactttgtattatgcaaga
ggatccaagcagctggggatatacaacgtcatgatgcaaagaatgatcctgggtgacctg
tttcaatttctatgcatctacagtgtcttgctctttggattttctgctgctgttgttact
ctcatggatgacagacttgcagacaaaaaaaatatcacaacgtcgacactgataccagat
aagtgtggaaagccgagttatagtgaattccattttgcattagtggaaatgttcaagttc
acttttggaatgggaaatctggatttcactgatgatgttgagtacaaagaagttttctac
atcctgcttgttggatacatagtgctcacttacatcctgatgctcaacatgctcatagct
ctgatgggaaatacagtcgaaaatactactgaacaaagtgaaaacatctggtacctgcag
agagccttcgcagttttggacatggagcggtctctaccaatgcagctgagacgtaagctg
aatttcagcatattgaaaaaggatgaagataaagaaaaggataaaaataataaaggaaag
aaaaagaatgaagataagaataaggatcctagctttttcagagtgattgaaaaggactgg
aagaaatggaagtcaggtcttcgcaagcagctcaaagaaaaccctgtaaagactgtccag
aaacggaatttgcatgggattgtgaaggattttcatagaagactcagaaatgatcagcca
gacggtaatggaaaccataacaacaaagatgggagtttgttggaagaaaatatcccaaaa
tag
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