Kryptolebias marmoratus (mangrove rivulus): 108248622
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Entry
108248622 CDS
T05608
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X2
KO
K15516
fragile X mental retardation protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108248622 (fxr1)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108248622 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
108248622 (fxr1)
mRNA cycle factors
Stress granule specific factors
108248622 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
KH_1
Agenet
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
108248622
NCBI-ProteinID:
XP_017292994
LinkDB
All DBs
Position
LG24:2074163..2083692
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AA seq
685 aa
AA seq
DB search
MEELAVEVRGSNGAYYKGFIKDIHDDSLTIAFENNWQPERQVPFSDVRLPPPDDAKKDIG
EGEEVEIFSRANEQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFERLRPVNTNKA
VTKNTFHKCTVPVPQDLQEACQNENAHKEFKKAVGACRISYCPETSELVIVSTNDATVKR
VSLLSDMHLRSLRTKLLLMSRNQEATKHLETSRQLVSSFQQEFTVRPDLMGLAIGSHGNN
IQQARKVPGVTAIELDEETGTFRIYGETEEAVKKARNFLEFVEDSVQVPRNLVGKVIGKN
GKVIQEIVDKSGVVRVKIEGDNDNKQPRQETQGMVPFTFVGTKESIGNVQVLLEYHISYL
NEVEQLRLERMQIDEQLRQITQGHRPVDRERGDRGERGAYNTDNSANATSSSLRGSRSYN
GRGRGRRGYNYNPGYGTNSEQSNASETDSERKEELSDWSLAGEDLDGERERGPRPQRDGR
RRPGPGRGRGGPGGRGRGGYSNSSAPRDHENYQPYGTVEANTETDQTADTDASESNLPAN
RRRRSRRRRTDEDATLIDGMSESDNASVSENGIEYSEAKPQRRNRSRRRRTRLPEERQPV
TVADYISRAESQSRQTMAKDTKKNKDVGQVEVIDELSPQSAPPTTNGSNNEVSDSSGNSA
TKAPRSSADKPAEVSSPQPVVNGLS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggcggtggaggtccgtggctcgaacggcgcttattacaagggctttatc
aaagatatccacgatgactctctcaccattgcctttgagaacaattggcagccagaacgc
caggtgcccttcagtgatgtcagattgccaccacctgatgacgccaaaaaggacattgga
gagggcgaggaggtggagatattttccagagctaatgagcaggagccttgtggatggtgg
ttagctaaagtccgcatgatgaagggagacttctatgtgattgagtatgcagcctgtgat
gccacctacaacgaaatagtaacctttgagcgtctgcgaccagtcaataccaacaaggct
gttaccaagaacaccttccacaagtgcactgtccctgttcctcaggatctacaggaagca
tgtcagaatgagaatgcacataaagaattcaagaaggctgtgggagcctgtcgcatctcg
tactgcccagagaccagtgagctcgtgattgtgtccaccaatgacgcaacagtgaagcgt
gtgtctttgctgagtgacatgcacctgcgcagcctcagaaccaagctgctgttaatgtca
cgcaaccaggaggccacaaaacacctggagacctccaggcaactggtctcatccttccaa
caagagtttacagttagaccagatctgatgggcctggccatcggcagccatggcaacaac
atccaacaagcacgcaaggttcccggtgtcactgccatcgagctggatgaggagacggga
actttcaggatttatggagagacagaggaggcagtaaagaaggccaggaacttcttggaa
tttgtggaagattcagtccaggtgccaaggaacctcgttggtaaagtcattggtaagaat
ggtaaggtcatccaggaaattgtagacaagtctggtgtggtgagagtcaaaatagaagga
gacaatgacaacaaacagcccagacaagagacgcagggaatggtcccattcacctttgtt
ggtactaaggagagcattggcaacgttcaggtcttgttggaataccacatttcttacctg
aatgaggttgagcagcttcgcctggagcggatgcaaattgatgaacagttgcgacagatc
acccagggtcaccgaccagttgacagggagcgaggagataggggagagagaggagcgtat
aatacagacaacagtgccaatgccacctcgtcttccttacgtgggagtcgctcctacaat
ggacgaggtcgtgggcgcagaggctataactacaatcctggatatggcaccaactcggag
cagtcgaatgcctctgagactgattcagagcgcaaggaggagctcagtgattggtccctg
gctggagaggacctggatggggaaagagagagaggccctagaccacaaagagatggccgt
agaagaccaggacccggcagaggccgaggagggcctggaggaagaggaagaggaggatac
agcaacagttctgcccctcgggatcatgagaactaccaaccttacggaactgtagaggca
aacactgagaccgaccagacagccgatacagatgctagtgagtccaacttgccagcaaac
cgccgccgcaggtcacgaagacgcagaacagatgaggacgccacgctgatagatggcatg
agcgagtctgacaacgcctcagtgagcgaaaacgggatagagtactctgaagcaaaacct
cagcgtcgcaatcgtagccggcgtcgccgcacccgcctgccagaagagaggcagccagtg
actgtggcagactacatatccagggctgaatctcagagcagacagacgatggccaaggac
accaagaagaacaaagatgtgggtcaggtggaagtgattgatgaactcagtccacagtct
gctccaccaaccaccaatggttctaataatgaggtttctgacagttcgggcaacagtgcc
acaaaagctcccagatcttctgctgacaagcctgccgaagtctcgagtcctcaacctgtt
gttaacggactgtcctaa
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