Kryptolebias marmoratus (mangrove rivulus): 108248658
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Entry
108248658 CDS
T05608
Symbol
ppfia1
Name
(RefSeq) liprin-alpha-1 isoform X12
KO
K26226
liprin-alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108248658 (ppfia1)
Membrane trafficking [BR:
kmr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108248658 (ppfia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Crescentin
Asd-4
Motif
Other DBs
NCBI-GeneID:
108248658
NCBI-ProteinID:
XP_024866697
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Position
LG15:31947093..32041421
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AA seq
1271 aa
AA seq
DB search
MMCEVMPTISEAEGPGGGNGSGQRGSGSPLQSDSEGHFESLMVSMLEERDRLLDTLRETQ
ENLGLTQSKLHEVSHERDSLQRQLNTALPQEFAALTKELNMCREQLLEKEEEIAELKAER
NNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKV
RERLRVALERCSVLEEQLTISHKELAYLREQSSQKRGLADGTSEVNHNSENTPTTNGKRS
SDDSLSQDEESGPGFGKACELQEVVDCQTADLGQLKESMAAMVSRISELEEDLDTARKDL
IKSEDMNTRLQRDLRESMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEVANKE
SLFRQSEERNRQLQEKLELAEQKLQQTIRKAETLPEVEAELAQRVAALTKPPCSNPQCAL
SGSKDTYNLIKAEERHGNVEESLRQLEAQLEEKNQELLRARQREKMNEEHNRRLSETVDK
LLSESNERLQLHLKERMSALEDKNALIRELEHTKKLIEESHHEKEQLLIQIETMRAENEQ
DRSRSNSLLHGCSQLGSTPDFRYPVSASSMVDTNSDHYGSALVLRRPQKGRVAAIRDEPS
KVQTLNEQEWERMQQANVLANVAHAFESDMDVSDLEEDRETIFSSVDLLSPAGQADAQTL
ALMLQEQLDAINNEIRMIQEEKENTTIRAEEIECRVGGGDVLGGRFRSLSSIPPSLCVGS
SLGGSPPSSGNSTPRRIPRSPNRELDRMGVMTLPSDLRKHRRKSAQDDKATIRCETSPPT
TPRSMRLNREAGLAASHEDIRDIRGLGSLQDGQGSNPSSSNSSQDSLNKAAKKKSIKSSI
GRLFGKKDKGRPSIPGKDSPSQAGTPEAEGSLKDGLGVGTLGGPSEKNRKLQKNPKTGHE
ILEEARRQGLPFAQWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREI
GISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTTGNVWVTHEEMESLAATPPTEDDEGSW
AQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMESLVDARMLDHLTKKDLRGQLKMVDSFH
RNSFQCGVMCLRRLNYDRKELERRREESQLELKDVLVWTNERVISWVQAIGLKEYSSNLY
ESGVHGALLALDESFDPNTLALLLQIPTQNTQARATLEREYTNLLAIGTDRKMEEDDDKN
FRRAPSWRKKFRPKDMRGMSLGASDTLPANFRVTSSSVASPSTQPKRSPMDGNRWSEDEG
QFPAFKTRMMN
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgcccaccatcagcgaggcagaagggcccggtgggggaaacggc
agcgggcagcgaggctcgggctcccctctgcagtcagactccgagggtcactttgagtcg
ttaatggtgtccatgttggaggagagggatcgccttcttgacactctgagagaaactcag
gagaatctgggcctgactcagagcaagctgcatgaagtgagccatgagagggattccctg
cagcgccaactaaacactgctttaccacaggagtttgctgcactgacaaaggagctgaac
atgtgccgggagcagcttctggagaaagaggaggagattgcagagctgaaggcagaaaga
aacaacactcggctcttgctggaacatttggagtgcctggtgtctcgtcatgagcggagt
ctgaggatgactgtggtgaagaggcaggctcagtctccagcaggtgtctccagtgaagtg
gaggtcctcaaagctctaaagtcactttttgaacatcacaaagcccttgatgagaaggtg
agggagcgacttcgtgttgctttagagcgatgcagtgtgttggaggaacagctcaccatc
tcgcacaaagaactggcttacctcagggagcagagcagtcagaaaagagggctggcagat
ggaaccagtgaggtcaaccacaactctgaaaacacaccaaccactaatggcaagaggtca
tcagatgactcactgagtcaggacgaggagtctggtcctggctttgggaaagcttgtgag
ctccaggaggtggtggactgtcagactgctgatctgggccagttgaaggagagcatggct
gccatggtgtcacgtatcagtgagctggaggaggacctggacacagcccgaaaagacctc
attaagtctgaagacatgaacacaaggttacagagagacctcagagagtctatggctcag
aaggaagacatggaggagaggatcaccaccctggagaagcgctacctggctgcacagcga
gaggctacttcagtccatgacctgaacgacaagctggagaacgaagtggccaataaggag
tccctcttcagacaatctgaggaaagaaacaggcagctccaggaaaagctggaactggcc
gagcagaagctgcagcagaccatccgtaaagcagagactcttcctgaggtggaagcagag
ttggctcagagggttgctgccctcacaaagcctccatgttcaaatcctcagtgtgctctg
tctggctctaaagacacttataatctgataaaggcagaagaacggcatggtaatgtggag
gaaagtctgaggcagctggaggcccaactggaggagaagaaccaggaactgctcagggca
cggcagcgagagaagatgaacgaggagcacaacagacgtctgtctgagaccgttgataaa
cttctttctgagtccaacgagaggctgcagcttcatctcaaagagaggatgtctgcgctg
gaggataagaatgctctgataagagaactggagcacacaaagaagctgattgaagaatct
catcatgagaaggagcagctcttaatccagattgaaacaatgagggcagaaaatgagcag
gacaggagcaggagtaactctttactgcacggatgctctcagctgggcagcactccagac
ttcagatatcctgtctcggcctcctccatggtggacactaactcagaccattacggtagc
gctcttgtcctgagacgacctcagaaaggacgcgtggcggcaatcagggatgagccatct
aaggtgcagactctgaatgagcaggagtgggagcgtatgcagcaggccaatgtgttagct
aatgtggcccatgcctttgagagcgacatggatgtgtcagacctagaggaggatcgggag
acgatcttcagctcggtggacctgctgtcccctgctggtcaggctgatgcacagaccctc
gccttgatgctgcaggagcagctggatgctatcaacaatgaaatcaggatgatccaagag
gagaaggagaacaccaccatccgtgcagaagagattgagtgcagggtcggtggtggggat
gtccttggaggacgtttccgctctttaagctccatccctccgtcactgtgtgtgggctca
tcgttggggggttcaccacctagctcgggcaactccacacctagacgcattccccggagc
cccaacagagaactggatcggatgggggtcatgactttgcctagtgacctgcgcaagcat
cgcaggaagtctgctcaggatgataaggctactattcgatgtgagacatctccccccacc
acaccacgctccatgcgcctaaacagggaggcagggcttgctgccagccatgaagatata
agagacattcgaggtttggggagcctgcaggacggtcagggcagtaaccccagcagcagt
aacagcagccaggactctctcaataaagcagccaagaagaagagcatcaagtcttccatt
ggacgcttgtttgggaagaaagacaagggcagacccagcattcctggcaaggactccccc
agccaagctggtactcctgaggcagagggctctctgaaggatggacttggagtgggcaca
cttggaggtccttctgagaagaacaggaagctgcagaagaatccaaagacggggcatgaa
atactggaagaagctcgcaggcagggcctgccgttcgctcagtgggatggaccaactgtt
gtgtcttggttagagctgtgggtgggcatgccggcctggtacgtggctgcatgtcgagcc
aatgttaagagtggagccataatgtcagcactgtctgacacagagatccaaagagaaatt
ggaatcagcaaccctttgcatcgcctcaaacttcgtctggccatccaggaaatcatgtct
ctcacaagcccctcagccccacccacctctagaacgaccacaggaaacgtttgggtcaca
catgaagagatggaaagtttggcagccacacctcctacggaggatgacgagggcagctgg
gcccagacgctggcatatggagacatgaaccacgagtggattggtaatgaatggctgccc
agtttggggctgccacagtatcgctcatacttcatggagtccctggtggacgcccgaatg
cttgaccacctgactaagaaggacttgagaggacagctgaagatggtggacagcttccac
aggaacagttttcagtgtggtgtgatgtgtctgaggaggctgaactacgacaggaaggag
ctggagaggaggagagaggagtcacagctcgagcttaaagatgtgctggtgtggacaaat
gaacgtgtgatcagctgggttcaagccatcgggctcaaagagtacagcagcaacctttat
gagagtggagttcacggagcactgctcgcattggatgaaagcttcgatcccaacactctg
gctcttctgctgcagatcccaacccaaaacacacaggctagagcaactcttgagcgtgaa
tacaccaatctgctggccattggcacagacaggaagatggaagaggatgatgataagaac
tttcgccgtgcgccttcgtggagaaagaagttcagacccaaagacatgagggggatgtcg
ttgggtgcatcagatactctacctgccaactttcgagtaacgagcagcagtgtggcatct
ccctccacacagccaaagaggagcccgatggacggtaaccgctggtcagaggatgaaggg
caattccccgcattcaaaaccaggatgatgaactga
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