Kryptolebias marmoratus (mangrove rivulus): 108248738
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Entry
108248738 CDS
T05608
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04080
Neuroactive ligand-receptor interaction
kmr04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108248738
04082 Neuroactive ligand signaling
108248738
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108248738
Ion channels [BR:
kmr04040
]
Ligand-gated channels
GABA-A
108248738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7205
Motif
Other DBs
NCBI-GeneID:
108248738
NCBI-ProteinID:
XP_017293197
UniProt:
A0A3Q3AJE3
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Position
LG9:7868349..7912708
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AA seq
454 aa
AA seq
DB search
MWSRGRTSSLLIIIRLLLLTALWEIRSVNASDDIKPNITLFTRILDSLLDGYDNRLRPGL
GDRVTEVKTNIFVTSFGPVSDTDMEYTIDVFFRQSWKDERLKFHGPMNILPLNNLMASKI
WTPDTFFHNGKKSVAHNMTMPNKLLRIKDDGTLLYTMRLTVHAECPMHLEDFPMDFHSCP
LKFGSYAYTISEVTYAWTRNASDSVVVEEESSRLNQYDLLGQTVGQETIKSSTGEYTVMT
AHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVSEKKKERASVV
KKNNAYAVAVANYAPNISKDSGTLPTIAKGGAADPSKPRADGKAQESKKTFNSVSKIDRM
ARIMFPVLFGSFNLVYWATYLNREPVIKDMVPSN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagagggagaacatcttcactcctcatcatcatccgcctgctgctgctcacg
gctctctgggaaatcagatcggtgaacgcgtctgatgacatcaaacccaacatcacgctg
ttcacacgcatcctggacagcctgctggacgggtatgacaatcgtctacggcctggtctc
ggagacagggtaaccgaggtgaagacaaacatcttcgtcaccagctttggacccgtttca
gacacagacatggagtacaccatagatgttttcttccggcaaagctggaaagatgaacgg
ttgaagtttcacggtccaatgaacattttgcccttgaacaacctcatggcgagtaagatc
tggactccagacaccttcttccacaacgggaagaagtctgtggctcacaacatgaccatg
cccaataaactgttacggatcaaagatgatgggacactgctctataccatgaggttaaca
gtgcatgcagagtgcccaatgcatctggaggatttccccatggactttcattcctgtcca
ctaaaatttggcagctatgcctacaccatctcagaggtgacttatgcttggaccagaaat
gcctcggactcggtggtggtggaagaagagagttctcgtctgaaccagtatgatctgctt
ggtcaaactgttggacaagaaaccattaaatcgagcacaggtgagtacacagtgatgacg
gctcacttccacctgaagaggaagatcggctactttgtcatccagacgtacctgccgtgc
atcatgacagtcatcctctcccaggtgtccttctggctgaacagagaatccgtgccggcc
aggactgtgtttggcgtgaccaccgttctcacgatgacaaccctgagcatcagcgcgagg
aactccctgccgaaggtggcctacgctactgccatggactggttcatcgccgtctgctac
gccttcgtgttctccgctttgatcgagttcgccaccgtcaattacttcacgaagcgcggc
tgggcctgggacgggaagagtgtcgtgagcgagaagaaaaaagagagggcatccgtggtg
aagaagaataatgcctacgcggtggccgtggccaactacgcgcctaatatcagcaaggac
tccggcacgcttccgaccatcgccaaaggcggcgccgcggatcccagcaagcccagagcg
gacggcaaagcccaagaaagcaagaagacattcaacagcgtgagcaaaattgacaggatg
gcacggattatgtttccggttctctttggctcgttcaaccttgtctactgggccacctac
ctgaacagagaacccgttataaaggatatggtcccgtccaattag
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