Kryptolebias marmoratus (mangrove rivulus): 108248748
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Entry
108248748 CDS
T05608
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108248748 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108248748 (rad54l)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108248748 (rad54l)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
108248748
NCBI-ProteinID:
XP_017293211
UniProt:
A0A3Q3AAD2
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All DBs
Position
LG24:22900306..22959048
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AA seq
739 aa
AA seq
DB search
MRKSLAPSQVAKRKLAGASSKDDDWTPETEKRRKCDEMKESQISPYRKPLSQLNIWPAAV
DANKHEAFIQHILSKPFKIPIPNYTGSLGGRALGLKRAGVRRSLHDPFAEDALVLYEPPI
LSAHELIKADKEKLPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIPGSYGCIMADEM
GLGKTLQCITLMWTLLRQSPDARPEIDKAIVVSPSSLVRNWYNEVGKWLGGRLSPVTIDG
GSKEEIDKQLVNFISQRGLRVPAPILIISYETFRLHAEILHRGKVGLILCDEGHRLKNSD
NQTYQALNAMGGQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKQFELPILKGR
DADASDKERQTGEEKLKVLIGIVNRCLIRRTSDVLSKYLPVKIEQVVCCRLTPLQTELYK
LFLKQAKPMETLQEGKISISSLSSITSLKKLCNHPALIYDRCVEGEEGFEGALNLFPPGF
SLKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRHRRYLYVRLDG
TMSIKKRAKIVERFNSPHNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA
RVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELF
TLNEGTASDTHDKFRCRRCVNGREVRPPAEDSDCTSDLSQWNHCLDKKGLRDQVLKASWD
AAVSFVFHQHSHEDHRRVV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagagtctagctcccagtcaggtggctaaacggaagttagcaggagcttcgagt
aaagacgacgactggacaccggaaacggagaagagaagaaaatgtgatgagatgaaagaa
agccagatttctccctacaggaagcctctgagccagctgaacatctggcctgcagctgtg
gatgctaacaaacatgaagcgtttattcaacatattctctctaagccttttaagattcct
attcctaattacacaggttctctgggaggcagagcgctcggtctgaaacgtgctggagta
aggagatcgctccatgatccgtttgcagaagatgccttggttctgtatgagcccccaatt
ctgagcgcacatgaacttattaaagctgacaaagaaaagcttccagttcatgttgttgtg
gatccagttttaggaaaagtacttagaccccatcagagagagggggtgaagtttctgtgg
gagtgtgtgacgggcagacgcatcccaggatcctatggctgcatcatggctgatgagatg
ggcctgggaaagactttgcagtgtatcaccctcatgtggactttactacggcaaagtcct
gatgctagacctgagatagacaaggccattgtggtttcaccttcaagtcttgttcgcaac
tggtataatgaagtaggaaagtggctgggaggccgcctttcaccagtgactattgatgga
ggctcaaaggaggagatcgataagcaactagtgaatttcatctctcagcgtggtttaaga
gttccagccccaatcctgatcatttcatacgagacatttcgactgcatgctgagatccta
cacagaggcaaagttggccttattctctgtgatgagggccatcggctgaagaactccgac
aaccagacgtaccaggctctgaatgccatgggtggtcagaggagagtgctgatatcaggc
actcccatccagaatgatctgctcgagtatttcagcctggtccattttgttaatgctgga
atccttggtacagcccaagaatttaaaaagcaatttgagcttcctatcctgaaaggtcgg
gatgcagatgccagtgataaagaaagacagacaggagaagaaaaactgaaagtgcttatt
ggcattgtcaacaggtgtttgataaggagaacatcagatgtcctgtcaaagtatcttcct
gtgaaaattgaacaggttgtgtgctgcaggctgactcctctgcagactgaactctataag
ctgtttctaaagcaggccaaacccatggagactttacaagaaggcaaaataagcatttcc
tccctttcttccatcacatccctgaagaagctctgcaatcacccagctctgatctatgac
aggtgtgtggaaggtgaggagggctttgagggggctctgaatctgtttcctccaggcttc
agcttgaaagctgtcgaacctcagctctctggaaagatgctggttctggattatattctg
gcaatgactcggaccacgaccagtgacaaggtggtgctggtctccaactacactcaaaca
ctggacctgtttgaaaaattgtgtagacacagaagatacctgtacgttagacttgatggc
acaatgtccatcaagaaaagagccaagattgtggaaagattcaacagtccacataaccca
gagtttattttcatgctgagcagcaaagccggaggatgtggcctgaatctgatcggtgca
aatcgcctggtgatgtttgacccagactggaacccagccaatgatgagcaggcaatggct
cgggtgtggagagacggccagaagaagacctgctacatctatagactgctctctactgga
actattgaggagaagatcctgcagagacaggcccataagaaagccctgagcagctgtgtg
gtggatgaggagcaggacgtggagcgtcacttctctctgggcgaactccgagaactcttc
acactcaacgaagggacagccagcgacacgcatgacaagtttcgctgtcgtcgctgtgta
aatggcagagaagtgaggccacctgcagaagattctgactgtactagtgacctttcccag
tggaatcactgcttggacaagaagggcctgagggaccaagtactgaaggcgtcctgggat
gctgctgtctcctttgtctttcaccagcactctcatgaggaccacaggagggttgtgtag
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