Kryptolebias marmoratus (mangrove rivulus): 108248916
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Entry
108248916 CDS
T05608
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108248916 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108248916 (papolg)
Enzymes [BR:
kmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108248916 (papolg)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
108248916 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
GH97_C
DUF4269
Motif
Other DBs
NCBI-GeneID:
108248916
NCBI-ProteinID:
XP_017293456
UniProt:
A0A3Q3BBW2
LinkDB
All DBs
Position
LG22:29641618..29658896
Genome browser
AA seq
835 aa
AA seq
DB search
MKEMSSSTMMPGGQQPQKHYGITSAISLAPPREIDHLYTKKLCDAMKPFGVFEDEEELNH
RLAVLGKLNNFVKEWIAEISELKNLPPSAIGCVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVERIDFFQSFFEKLKLHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPD
NLDLRGDSILKNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNI
LGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMTEEFKHGLSVTDEILQGKAEWSK
LFEPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEFITLAHVNPQS
FPGSKENSNENKFVSMWFIGIIFKKVENAESVNIDLTFDIQSFTDTVYRQANNINMLKDG
MKIEATHVKKKQLHQYLPPELVQRKKRSIAELNRSSNSEGSKRISLDSSHLDSSRDTDSG
TPFTSPTSKPQKQAADTNDSEIPPKQLFVEDPPAPSTTAAAKEQGVSIAVISSKATVKAK
PPSPPASTSVSNVLSGSMKPSATSSPKEEPNGLEDPINEPPAKRPHSPTEEDLAKRHKDT
EVASSDDSTFKEPYPPSSDCAPHGEAPSTPPQAGAKAKPISTIDSSRTQRLPSMELPDAS
SPLPASNSCRVVKNSIKLALNRSTITPPKPPMFEGTLPTEAPAAAEEKGMSIPVIGSKHV
GPKHVAPPVGSSIPTLVSRISEPLNGAASKRPHSPSLEEQAKRLKETEKARVHIS
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcaagcagcaccatgatgcctggggggcagcagccgcagaaacattac
ggcatcacctctgccatcagcctggccccccctagagaaatagaccacctatataccaag
aagctgtgcgatgccatgaaaccttttggtgtgtttgaggacgaggaggaactaaatcac
agacttgctgttctcgggaagttgaataactttgtgaaggaatggatcgcagagatcagt
gaattaaagaatcttccaccatcagcaattggttgtgttgggggcaagatattcacattt
ggttcatacagactcggagtgcacacaaaaggagctgatattgacgccttgtgtgtagct
ccacgtcatgtcgaaagaattgactttttccaatctttttttgagaaattgaaactacat
gaagagattaaagatctcagagctgttgaggatgcttttgttccggtgataaaattcaaa
tttgatgggattgagatcgacctgctttttgccagattggccctccagtccatccccgac
aatctggatctgaggggagactcaattctgaagaatctggacattaggtgtatccgcagc
cttaacggatgtcgagtaactgatgagattttgtacctggtgccaaacaaagaaaacttc
aggttgacattaagagccatcaaactttgggcaaaacgtcgaggaatttattccaacatc
ttaggctttctgggtggcgtgtcgtgggccatgttggtggcgaggacctgccagctctac
cccaacgccgtggctgccacgctggttcataagttcttcttggtcttctccaaatgggag
tggccaaatcctgttttactgaaacaaccggaggacagcaatctgaatttacctgtgtgg
gatcctagagtgaacccatctgacaggtaccacctgatgcccatcatcacacctgcctac
ccccagcagaactccacgtacaacgtgtccacatcaacgcgcaccatcatgaccgaggag
ttcaaacacggtctcagcgtcacagacgagattcttcaaggcaaagcagaatggtccaag
ctctttgagccacccaactttttccaaaagtacaagcattacatcgttctgactgccagt
gcatccacagaagaaaaccacctggaatggattggacttgtggagtcaaagatccgggtt
ctggtgggaaaccttgagaggaacgagttcatcactctggctcatgtcaaccctcagtcc
ttcccagggtccaaagaaaacagcaatgagaacaaatttgtttccatgtggtttattgga
atcatcttcaagaaggtggagaacgcagagagcgtgaacattgacctgacctttgacatt
cagtccttcactgatactgtgtacagacaagctaacaacatcaacatgctaaaagacggg
atgaagattgaagcaacacatgtgaagaagaaacagttgcatcagtatctccctcctgag
cttgtacagagaaagaaacggagcatagcagagttgaaccgtagctcgaacagcgagggc
tccaagcggatctctctggacagcagtcacctggacagctccagagacaccgactcgggg
actcccttcacctccccaaccagcaaaccccagaaacaagcagctgacacaaacgacagt
gaaatcccccccaagcagctttttgtggaggacccgccagcaccgagcacaacagctgct
gctaaagagcagggcgtgtccatcgctgtcatcagctcaaaggccacagttaaagcaaag
cctccgtctcctccagccagcacctcagtcagcaatgttctgagtgggagcatgaagccc
agcgccaccagcagcccaaaagaggagcccaacggcctcgaggaccccatcaacgagccc
cctgccaagagaccacactcccctacagaggaggacttggccaagaggcacaaagatacc
gaagtggcatccagtgatgactccacatttaaagagccatacccaccatcctcagactgt
gctccacacggagaagcacccagtactccccctcaggctggagccaaagcaaagcccatt
tcaacaattgatagctcaaggacacagagacttcccagcatggagctcccagatgcatcg
tcacctctcccagctagcaacagctgtcgagttgttaaaaactccatcaaactggctctc
aaccgcagcaccatcaccccccccaaaccccccatgttcgaagggaccctccccactgag
gctcctgccgccgccgaagagaagggcatgtccattcctgtcatcggctccaaacatgtg
ggacccaaacatgtggcgccccctgttggcagctccatccccaccctggtgagcaggatc
tctgagcccctgaacggagcggcctcaaagagaccccactccccctccctggaggaacag
gccaagaggctgaaggaaacagagaaggccagagtccacatatcgtga
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