Kryptolebias marmoratus (mangrove rivulus): 108248943
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Entry
108248943 CDS
T05608
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108248943 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108248943 (rsf1a)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
108248943 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
Motif
Other DBs
NCBI-GeneID:
108248943
NCBI-ProteinID:
XP_017293497
LinkDB
All DBs
Position
LG2:complement(3091611..3106221)
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AA seq
1437 aa
AA seq
DB search
MAAPAVVVVARSSGPPLCPSFAEVCSFLERYGPALDLPEMTFPQMERYLRDTAAVPKPLV
DLHVKLLRKLGKSVTTDRWEKYLAKVCQELNSTWAWELEHKGYQEMSMECKSSILKYLCE
CQFDDNLKFKMLVNDEDSEKMRLQPIGRDQQGLLYWLQLDQEQNIRLYTEEQDDLDGSTW
KCIVRTRNDLAEALELLKAQVEPNQSPDQNQAASRSDSPAEKETGENNFGVTNAKLPQTT
EGQTDNKINLVKEEIPFMQVVKQEETLPVEQENTESAVKEENVDKKPSAFDNRVSTITAI
KPEPRDADSPKNARPIVMATTVSLTKLSKVEEAEWAAVRSNQQAKIPLKKRDLKLADSFH
SNHLNNSNSSSIIVCNPAAISSKDGKLLNSLGPLGSPAPLQQQVVVAPRQELTNGRASHL
PHKEGQNGVTGVLGQVVGHIGVIRSPSEYHRAPGAGQQEQNGPSSEPCGPRAVDEDKEVG
RQSVLVRKGPSERETTPAVAFLPPDVAMEDQTREEPQPSPLKTEGPPEDTETKVGSVGAS
SLSSVTKRKTDEDPDKITEEEESGASRQQKDEELEEAPERCVAEGVKGDPGKDSNISGQG
DSELSGTVLSLKTDKWDKTDQQGVNGGLASRARLKGSGFGSEQNQGPLEEASSELQKEGI
RLKIKIPPHRRNKLRKKGEKEEEKEREAQDEGRSLRRSARICRSSALPNCRPSSKAAESQ
RKKPQKKQTTPARAREEEQAEGEEEEEEEGDDEEHGSPAAKERKAEPAGKFRKRRGKRRH
GRPRWTNIRPKRRRPNEEGEAEDRGRKRGEEEEEEEEEGEGGSDSEEESCKSEQIPSEDA
CTHCGLPNHPELILLCDSCDKGYHTACLRPPLMLIPDGEWFCPPCQHKMLCEKLEEQLQN
LDSALKKRERAERRRERLVYVGISVENIIPEGDEDEEEEKTAKPKDSKKSKNLGRRSTRT
RKHISYRFDDFDDAIDEAIEEDIGDICGGAGTGKDITSVLSDDGKDGQRPIRSQTRLARN
RKKRRLNDLESDSTAIESEDEFLLSNSSEDEEFGASGGDDDAEEEDEDAGSDVGSWDRGT
RPKRGMRGAPKFKPKKTQRRGRRRGRRRSTEEEEEDSDIEMDSDQFSDMTDSDADKKRRG
LRRGQRQQVNYRETSESSDNSRPSAERDKAKRRGRPRKERLSSDFSDVSKDSEEEDDYED
EDEDDQRRRVNKRRREEQEDLRGRRRREKQRGYEEDEGAEERRRRMKRRQLERRDDKRRR
LSRTDREEEDLEKMGRGRRREILSEQRRRRLAQMLKKRRPSTDEEDEDESEDSDSSSEDG
RPIRKRLNRIDSDDEEEEDEGQKTVSKKSSAVERRADRRNDSDAQERGRGQSPTPSNRLQ
ASRGPEKPGTGSPAVPRDSAPSGRQERHNGPLREEEEYEEEEEESDSVNSVQSSPQS
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggcggtggtggtggtggcgaggagctccggcccgccgctctgcccgagc
ttcgcggaggtgtgctcgttcctggagcggtacggaccggcgctggacctccccgagatg
actttcccgcagatggagcggtatctgcgcgacaccgcggcagttcccaaacctctggtg
gatcttcatgtgaagctgctcagaaaactggggaagtctgtgaccacggaccgctgggaa
aaatacctggctaaggtttgtcaggagctgaacagcacgtgggcctgggagctggagcac
aaggggtaccaggagatgtctatggagtgcaagtccagcatcctcaagtatctgtgcgag
tgccagttcgatgacaacctgaagtttaagatgttggtcaacgacgaggactctgagaag
atgcgtctgcagcccatcggtcgggaccagcagggcttactgtactggctgcagctggac
caggagcagaacatccggctgtacacggaggagcaggacgatctggacggatccacctgg
aagtgcatcgtcaggactcgcaacgacctggctgaagctctggagctgctgaaggctcag
gtagaaccgaaccagagtccggaccagaaccaggctgcatccaggagcgacagtcctgca
gagaaagaaaccggggagaacaactttggagtcaccaacgccaaacttccccaaactaca
gagggacaaacggacaataagatcaacctcgttaaggaagaaataccattcatgcaagtg
gtgaagcaggaggaaacgctgcccgtcgaacaggaaaacacagaatccgcagtgaaggaa
gagaacgtggacaagaaaccgtctgccttcgataaccgcgtcagcaccatcaccgccatc
aaacccgaacccagggacgccgacagcccaaaaaatgccaggcccattgtcatggcgacg
actgtgagtttgacaaaactcagcaaggtagaggaagcggagtgggccgctgtcaggagc
aaccagcaggccaagatacctctgaagaagagggaccttaagctggcggatagcttccac
agcaaccaccttaacaacagcaacagcagcagcataatcgtctgcaaccccgcagcgatc
agcagcaaagacgggaagctgctcaactcattaggacccctgggaagtccggcgcctttg
cagcagcaggtcgtcgtggcgcccaggcaggaactgaccaacgggagagcttctcacctg
cctcacaaagagggacaaaacggtgtcacgggggttttaggtcaagttgttggtcacatt
ggggtcatccgcagcccgtctgagtatcacagagcccccggtgctgggcagcaggagcaa
aacgggccgagctcagaaccctgtggacccagggccgtggacgaggataaggaggtgggt
cggcagtcagtgctggtgaggaagggaccgagtgaacgggagacaacaccagcagtcgct
ttccttcctcctgacgtggcgatggaggatcagacgcgtgaagaacctcagccatcgcct
ctgaaaaccgagggacctcctgaagatacagagacgaaggtgggttctgttggcgcctcc
tctctgtcttcagtcaccaagagaaagacggacgaagacccggataaaatcacagaggag
gaggagtcgggagcgagtcgtcagcagaaagatgaggagctggaggaagccccggagcgt
tgtgtggccgaaggggtcaaaggtgatccaggaaaggactcaaacatttcaggacaaggg
gactcagagttaagcggcaccgttttatctctaaaaacagacaagtgggataaaacagac
caacagggggtcaacggtgggctggcgagccgagccaggctgaagggcagcgggtttgga
tcagaacagaaccagggtcccctggaggaggcctcctccgagctccagaaagaaggaatc
cgcttaaagatcaagattcctccccaccggagaaacaagctgaggaagaaaggagaaaag
gaggaggagaaagagcgggaggcgcaggacgaagggaggtcactgaggaggtccgcgagg
atctgcagatcatctgctttgccaaactgcaggccgagttcgaaggcggctgagagtcag
aggaagaaaccacagaagaagcagacgacaccggccagagcgagggaggaagagcaggca
gagggcgaggaagaggaggaggaggaaggagacgacgaggagcacggctcgcctgcagcg
aaagaaagaaaagccgagcctgctgggaaatttaggaaacgaagggggaaacggaggcac
ggacgaccccggtggaccaacattcgcccgaagagacgcagaccgaacgaggaaggcgag
gcagaggacagggggaggaaacggggagaggaggaggaggaggaggaggaggagggtgaa
ggagggagcgactcggaggaagaatcgtgtaaatcggagcagattcccagcgaggacgcc
tgcactcactgcggcctcccaaaccatcccgagctgatcctgctgtgtgactcgtgtgat
aaaggataccacacggcctgcctgcggccgccactcatgctgatcccagacggagaatgg
ttctgtccaccgtgtcaacacaagatgctgtgtgagaaactggaggagcagctgcagaat
ctggacagcgctctgaagaaaagagagcgagcggaaaggaggagggaacggctggtgtac
gtggggatcagcgtggagaacataattcctgagggtgatgaagacgaagaggaggagaaa
actgcaaagccgaaagattcaaaaaagagcaaaaatctgggcaggagatcgaccagaacc
agaaaacacatcagctacaggtttgatgactttgacgatgccatcgacgaggcgatcgag
gaggacatcggggacatctgtggtggagcagggacgggcaaagacatcacctccgtcctc
tcagacgacgggaaggacggccagcgtccaatcagaagccagacccggttggccaggaac
aggaagaaacggcgactgaacgacctggagagcgacagcacggcgatagagagcgaagac
gagttcctgctcagtaacagctcagaggatgaggagtttggcgcgtcggggggagatgat
gacgccgaggaggaagacgaggatgcaggcagtgacgtgggtagctgggacagagggacc
cggcccaaacgggggatgagaggggcaccaaaatttaaaccaaagaagacccaacgccgg
ggcaggagacggggacggagacgctccaccgaggaagaggaggaagacagcgatatagag
atggactcggatcagttcagcgacatgaccgacagcgacgcagacaaaaagaggcggggt
ctgaggcggggccagcgccagcaggtcaactaccgggagacctcggagtcgtcggacaac
tcccgcccctccgctgagcgggacaaggcgaaacgccgcggcaggccgcgcaaagagcgc
ctgtcgagcgacttcagcgacgtgtctaaagactccgaggaagaggacgactatgaggac
gaggatgaagacgaccagagaaggagagtgaacaagagaagaagagaggagcaggaggac
ctccggggcagaaggaggagagaaaagcaaagaggatacgaggaagacgagggcgccgag
gagcgaaggaggagaatgaagaggaggcagctggagaggcgcgacgacaagcggaggaga
ttatcgcggacagacagggaggaagaggatctggagaagatgggcagggggaggaggagg
gagatcctgtcggagcagcggcgccggcggctcgctcagatgctgaagaaacgacgacct
tccacagacgaggaggatgaggacgaatccgaggactcggattcttcatcagaagatggc
cgaccgatccgcaaaagactcaaccgcatcgactccgatgatgaagaagaggaggacgaa
ggacagaagactgtgagtaaaaagtcctcggcagttgagaggagggctgacaggagaaac
gacagtgacgctcaggaaagggggaggggccaaagcccgaccccgtctaacagacttcag
gcctccagaggccccgagaagcctgggactggaagtccagctgtgcccagggacagtgcc
ccctcaggcaggcaggaaaggcacaacggccccctgcgtgaggaggaagagtacgaggag
gaggaggaggagtcagactcagtaaactcggtccagagcagtcctcagtcatga
DBGET
integrated database retrieval system
