Kryptolebias marmoratus (mangrove rivulus): 108249107
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Entry
108249107 CDS
T05608
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108249107 (brf1b)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
108249107 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
RB_B
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-GeneID:
108249107
NCBI-ProteinID:
XP_017293757
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All DBs
Position
LG19:103405..138627
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AA seq
696 aa
AA seq
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MTSRVCRTCGGSDIDVDQARGSAVCTGCGSVLEDNIIVSEVQFVEGSGGVSSTVGQFVSA
DGPVKAPILGSGFHISVGKESRAQTLQSGKRQIQQLGSQLQLNQHCLDTAFNFFKLVVSK
HLTRGRKMEHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGMKTHEVSMTALRLVQRMKRDWMHTGRRPSGLCGAALLVAARMH
KFRRSVKDVISVVKVCQTTLRKRLTEFEDTPTSQLTIDEFMKVDLEQECDPPSFTAGQHK
AKMQQLEQELARKLDEVEGEISCFKDEIETELEKSRPKLRGVYAAYTKEIAPEEEEVLSS
TSDPEETEETEMQATTQHLTQDFLCQVIQEEEGQGKTADEGFCDQETEPETLGTTTRPQV
TPLSVILGKLPSAARLGLQESFHTFAGSETGVKPDSEVPQSGELDLKDIDDQEIEKYILN
EKEVEVKTELWMKQNAEYLKEQKEKEERINKEKEQGTYKEKKKKYKKREQIEASTAGEAI
EKMLEKKKISSKINYDVLRDLNGVTGSPSTTTSDPPEGNATRKRLSRRRRKTSEVNPDLS
VNATIMGKRFRRLISSTPKKKKTPPQVETAVTMATKPTTTEAAAAPTPDAIPDTGSTPPA
APPPAEEEEEEEELEEECVSALQLVGDYGCEEEEVF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccgggtgtgccggacctgtgggggctccgacatcgatgtggaccaggcccgg
ggcagcgccgtgtgtacaggctgcggttcagttctggaggacaacatcattgtttctgag
gtccagtttgttgagggaagtggaggcgtgtcttccaccgtgggacagttcgtttctgcc
gacggtccagttaaagctccaattcttggttctggttttcacatcagtgttgggaaggag
tcccgagctcagaccctgcagagtggtaagcgtcagatccagcagctcgggagtcagctg
cagctcaaccagcactgtttagatacagccttcaacttcttcaagctggtagtcagcaaa
cacctgacccgagggcgtaagatggagcacgtcatcgccgcctgcctctacctggtgtgt
cgcaccgaggggacgccccacatgctgctggacctgagcgacctgctgcaggtgaatgtt
tacatcctgggaaagacgttccttctgctggcgagggagctctgcatcaatgcacccgcc
attgacccctgcctgtacatccctcgctttgctcacatgttggagtttgggatgaagact
catgaggtttccatgactgctcttcgtcttgttcagaggatgaagagggactggatgcac
actggtcgccgaccatctggactctgtggagcagctctcttggttgcagctcggatgcat
aaattccgtcggtcagtgaaggatgtgatcagtgtggtgaaggtttgccagacaacgctg
aggaagagattaacagagtttgaagacacgcccaccagtcagttaaccatcgatgagttc
atgaaagtggatctggagcaggagtgtgaccccccttccttcactgctggacagcacaaa
gccaagatgcagcagctggagcaggagctggccaggaaactggatgaagtagaaggagaa
atcagctgcttcaaagatgagatagaaactgagttggagaagagtcgtcccaaactgaga
ggagtctatgccgcctacaccaaagaaatagcccccgaggaggaagaagtcctgtcctcc
acatctgatccagaagagacagaggaaaccgagatgcaggccaccactcaacacctgacc
caagacttcctgtgccaagtgattcaggaagaggaggggcagggcaagacagcagatgaa
ggtttctgcgaccaagagacagagccagaaacattggggacaacaacacgtcctcaggtc
acccctctgtctgtcatccttggaaagctgccaagcgctgctaggctaggccttcaggag
agctttcacacctttgccgggtcggaaacaggtgtgaaaccagacagcgaggtgccgcag
agcggagagctggatctgaaagatatcgatgatcaggagatcgaaaagtacatcctgaat
gagaaggaggttgaagtgaagacggagctgtggatgaaacagaatgcagagtacctgaag
gagcagaaagagaaggaggagagaataaacaaggagaaggagcagggcacctacaaggag
aaaaagaagaaatacaaaaaacgtgagcagattgaggcgtcaacagcaggcgaggccatt
gagaagatgttggagaaaaagaagatttccagtaagataaactacgacgtcctcagagac
ctgaacggcgtgacaggaagtcccagcacaacgacctctgacccgccagagggcaatgca
acacgtaaacgactcagccgccgccgcaggaagaccagcgaggtcaacccagacctttct
gttaacgcgaccatcatggggaaaaggttccgccgcttaatttcctccacaccaaagaag
aagaaaacacctccccaggtggaaactgccgtcactatggcaacaaaaccaacaacaaca
gaagctgcagcagcaccgactcctgacgccatcccagacacaggctccacccccccagct
gctccgccccctgctgaggaagaggaagaagaggaagagttggaggaagagtgtgtgagt
gcactgcagctcgtaggagattatggttgtgaggaggaggaagtgttttag
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