Kryptolebias marmoratus (mangrove rivulus): 108249138
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Entry
108249138 CDS
T05608
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
kmr00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
kmr01100
Metabolic pathways
Module
kmr_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
108249138
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
108249138
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
kmr01003
]
108249138
Enzymes [BR:
kmr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
108249138
Glycosyltransferases [BR:
kmr01003
]
O-Glycan biosynthesis
Glycosaminoglycan
108249138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
DCR
Motif
Other DBs
NCBI-GeneID:
108249138
NCBI-ProteinID:
XP_017293804
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All DBs
Position
LG12:complement(167660..190849)
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AA seq
814 aa
AA seq
DB search
MTGNPCARRLARRSRSALLLSAVAVLLIQTLIVWDFSSLDPGGGGDGGARSREKREDRTG
GLNKADKEPPRRKEGKAAVRHQLQAEAYHSHRPKEKLHLDSNNNENFDGNSNLGTRSQRQ
RLPVQNVQRTMDKTPSMLGTEVHKPAPVITKSPDRTRKARPQLPTLPGPAQGSNQDPPFY
QTRRPASPPLPPSLEPKKEPPQCEISGKEAISALSRAKSRECRQQIVEVYCKHKERALMP
EKVPRYCQIEGKANVNAQWDDAAASDAAPPVRIAFVLVVHGRASRQLQRLFKAIYHTSHF
YYIHVDKRSDFLHREVLSLAAQFPNVRVTSWRMATIWGGASLLSMYLRSMKDLLLMSDWS
WDFFINLSAADYPIRTNEQLVAFLSKYRSMNFIKSHGRDNARFIRKQGLDRLFYECDNHM
WRLGDRRIPEGIAVDGGSDWFLLNRPFVDYVVNSKDELVGGMKRFYGYTLLPAESFFHTV
LENSVLCETMVDNNLRLTNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQASRPTFF
ARKFEASVSQEIIGQLDAFLFGPFPSGTPGLQAYWENVYEQETDGLSSLSDSRLSHYHAF
GRMGVSRAAASLQGRPNANSCRFVATSHPVSVHLYFLSDQFQGYLVRLMATNRASAQLES
LETWVTPKDHFTLASPPISNNRLQHIQIGSDWDPKERLFRNWGGLLGPEDEPAAAQRWTR
SQSNLTATVVWIDPTNVIAATYDIMVDASAEVTHYRPPLSGPLRPGVWTLRVLHHWNLLG
QTSFIVAPLEFHRQQLVQKGGGFFESIMGQMFLH
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggaacccgtgcgcccgcaggctggcccgccgctcccgctccgccctgctgctg
tccgccgtggcggtcctgctgatccagaccctcatcgtgtgggacttcagcagcctggac
cctggaggagggggggacggaggcgccaggagccgggagaagagggaggaccggactggg
gggctcaacaaagccgacaaagagcccccgcggaggaaggaggggaaggcagctgttcgg
caccagctgcaggcggaggcgtaccactcccatcggcctaaagagaaactccacctggac
agcaacaacaacgagaacttcgacggcaacagcaacctggggacccgatcacaacgccag
agacttcctgtccaaaatgtccagagaacgatggataagactccgagcatgctgggaact
gaggtccacaaacctgctcccgtcattacaaaaagtcccgaccgcactcgtaaggcccgg
ccccagctgccgaccctcccaggaccggctcaggggtccaaccaggaccctccgttctac
cagaccaggaggccggcttcccctccgctgccgcccagtctggagccgaaaaaggagccc
ccgcagtgcgagatcagcgggaaggaggcgatctctgccctgtccagagccaagagccgc
gagtgtcggcagcagatcgtcgaggtttactgcaaacacaaagagagggcgctgatgccc
gagaaggtcccgcggtactgccagatagaaggtaaagccaacgtgaacgctcagtgggac
gacgccgcagcctcggacgccgctccgcccgtacgcatcgccttcgtcctggtcgtccat
ggccgagcctcccggcagctgcagcgcctctttaaggccatctaccacacctcccacttc
tactacatccacgtggacaagaggtccgacttcctccacagagaggttctgtctctggca
gcccagtttccaaacgtcagagtgacgtcctggcggatggccaccatctggggcggagcc
agcctcctgagcatgtacctgcgcagcatgaaggacctcctcctaatgagcgactggtcc
tgggacttcttcatcaatctgagcgccgccgattaccccatcaggactaacgagcagctg
gtggcgttcctgtccaaatatcgcagcatgaacttcatcaaatctcacggcagagacaac
gcacgtttcatccgtaaacagggtctggaccgactcttctacgagtgcgacaaccacatg
tggcgtctcggagatcggaggatccctgaaggcatcgctgtggacggaggttctgattgg
ttcctgctcaaccgcccgtttgtggattacgttgtgaactcgaaggacgagctggtcggc
ggcatgaaacgtttctacggttacacgctgctgcccgccgagtcgttcttccacaccgtc
ctggagaacagcgtcctctgtgagaccatggtggacaacaacctgagactcaccaactgg
aaccgtaaactgggctgtaagtgtcagtacaagcacatcgtggactggtgcggctgctcg
cccaacgacttcaaaccgtcggatctgccgcgcttccaggcctccagacccaccttcttc
gcccggaagtttgaggccagcgtgagtcaggagatcatcggccagctggacgccttcctg
ttcggaccgttcccctccggcacgccgggccttcaggcctactgggagaacgtctacgag
caggagacggacggactctccagcctgtcggattctcggctcagtcactaccacgccttc
ggccgaatgggcgtgtcccgcgccgccgcctcgctgcagggacgtcccaacgccaacagc
tgcaggtttgtagccacgagccacccggtgtcggtgcacctttacttcctgtcggaccag
ttccagggctacctggtgcgtctcatggccaccaaccgggcctcggctcagctggagagc
ctggagacctgggtgacacctaaagaccacttcaccctggccagtccacccatctccaac
aacaggctccagcacatccagattggctcggactgggacccaaaggagcgcctcttcagg
aactgggggggtctgctgggacccgaggacgagccagcagccgcgcagcgctggactcga
agccagagcaatctgacggccaccgtggtctggatcgaccccaccaacgtcatcgctgcc
acctacgacatcatggtggacgcgtctgctgaggtcacccactaccggccgcctctgagc
ggcccgctgaggccaggcgtctggaccctgagggttctgcaccactggaacctgctgggt
cagaccagcttcattgtagctcctctggagtttcaccgacagcagctggtccagaaaggt
gggggattctttgagtccattatgggacaaatgtttctgcactga
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