| Entry |
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| Symbol |
col4a3
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| Name |
(RefSeq) collagen alpha-5(IV) chain isoform X1
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| KO |
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| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108249250 (col4a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108249250 (col4a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108249250 (col4a3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108249250 (col4a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:kmr04147]
108249250 (col4a3)
00536 Glycosaminoglycan binding proteins [BR:kmr00536]
108249250 (col4a3)
Exosome [BR:kmr04147]
Exosomal proteins
Exosomal proteins of other cancer cells
108249250 (col4a3)
Glycosaminoglycan binding proteins [BR:kmr00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
108249250 (col4a3)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG5:complement(513779..553373)
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| AA seq |
1684 aa
MEPRTPRRNLVLLLVNLCLLSAGDTKQVCHCSGKSPCHCDGVKGQKGEPGFIGYPGLPGV
TGFPGQEGNPGPPGEKGNRENAGGPGMKGSQGLPGRPGFPGSPGLPGIPGNEGPVGRPGL
PGCNGTKGDVGFPGFPGVQGPPGQRGSEGPRGEKGDLLFYPVQQEIKGATGPQGPDGDTG
QSGDPGDTGQPGPPGPPGLIGRSGVPGIQGEKGQEGPSPTSPGPQGQKGDRGPPGIPGKK
GIKLYAEGPKELKGEPGEIGQKGCLGDPGVPGEPGIKGEKGDRGDSGSLGKPGKKGLQGE
FGEKGQPGDPGYLGPAGIVGILGEKGSRGLPGPPGEVVLINIFLKGQRGVPGPAGLPGVP
GDQGIIGFPGLKGEQGVALDGPPGSQGTPGSSGPRGDPGEPGPSITGPPGRTGVPGVRGA
EGEPGEPGIPNFVVVGTGLPGAKGLQGLTGPPGLKGEIGPKGDKGEMCSVCSLVSGLPGP
PGDPGEPGDSGMPGAAGIKGTIGDKGLKGVVGPPGPPGRFGRPGLEGSPGPAGEPGIMRM
VGQKGEDGDKGEPGLQGLEGTDGFSGEPGRKGVQGQKGNPGPPGPKGESGSLGETGPRGL
TGQMGPTGQFGIGAPGPQGPKGDIGFLGEPGEPGKQGEKGAPGESISFPGDPGQKGEKGL
FGYPGPEGVTGPAGLQGLGGPKGEKGLDGLSIPGFPGIMGLKGNKGSKGKPGFPSFGIKG
REGPSGPPGTVGLKGNRGVGVRGNQGQPGPQGEDGFVGPQGQPGPPGSQGVPGLRGQVGL
PGPKGRRGLDGGPGPTGLTGVCVPGTPGPRGVQGPKGVTGFIGIRGSKGLKGDPGFPGKG
PVGIQGPTGKQGFDGAPGSMGNTGPKGLRGNDREPGSPDKQTPDLQILSQMMSRFTLWIR
GNMGHPGPPGSPGQDGVKGETGPSGLKGQRGQDGDRGSQGTPGDQGDRGEPGQKGTEANI
TVLGAPGDPGHQGAQGSTGIKEERGASGLPGPNGRQGECGIPGPQGPVGDPGRDGEKGLP
GFIGPPGDIGLPGWLGYKGVKGSKGIGGVPGLNGLPGQDGYKGDKGEPSQPGPGAKGPPG
EKGISGLPGTPGPKGPPGHSGNFGPQGSDGPCGPKGPPGPPGGRGPPGYVGEKGFDGLPG
NNGPPGCSGPPGAKGPPGNPGPTGPKGNQGQDGIPGPPGEKGTMGGCGVGPNGPDGDKGE
PGCIGERGPPGPCGPPGPSGSAGDPGSPGTPGPPGPAGCPGPEGPCINGVKGDKGLPGEK
GPQGPPGYKGPPGLPGPGYKGHKGCKGQPGPPGPTGPFGDTGPPGSPGCCGPPGPPGMKG
TRGGNGPKGPTGMKGEKGPPGFIGPQGTQGLPGRQGEPGRNMITGVKLEPGHPGEKGDMG
DMGERGLPGPTGQTGDQGVNGDAGQKGQTGNKGSNGLRGETGNKGSTGPKGQAGERGYKG
AKGNSGEPGKRPVPPVKNGFLFTRHSQSRTVPKCPNGSSFIFSGYSLLFINGYSRAHGQD
LGTLGSCLHRFSTLPFLICESSGECKYAERNDYSYWLSNIKDPLPENPSTNTEELLKAKI
SRCSVCEAKANVIAVHSQTTSLPDCPAKWKTLWSGYSFVMETGLGAEGSGQPLASAGSCL
ENFHKMPFIECNGSPGNCKQDSSAYSYWLAALDSRSMFKKPKGWSTSGDSPEKISRCRVC
MKQI |
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| NT seq |
5055 nt +upstreamnt +downstreamnt
atggagcccagaaccccgaggaggaacctggttctgctgctggtgaacctctgcctcctg
tctgcgggagacaccaaacaggtttgccactgctccgggaaatctccctgtcactgtgat
ggggtcaaaggtcaaaagggagaacctggatttattggttaccctggacttcctggagtg
actggtttccctggacaagaggggaatccaggcccacctggagaaaagggaaatcgtgag
aacgcaggaggtccaggaatgaagggatctcagggacttccaggaagaccaggttttcca
ggctctccaggcctgccgggaattcctggaaatgaaggaccagtcggacggccgggactt
ccaggatgcaacgggaccaaaggtgatgttggttttccaggcttccctggggttcaagga
ccacctggccaacgaggcagtgaggggccacggggggagaagggagacttgttgttctac
cccgttcaacaggagataaaaggagcaacaggaccacaagggccagatggagacacgggt
caaagtggagatcctggagacacaggccaaccaggaccaccaggacctcctggacttatt
ggacgatcaggggtgccagggatccaaggagaaaagggtcaagaaggtcccagtccaacc
agccctggtccacaaggacaaaagggtgaccgtggacctccagggatccctggaaagaaa
ggcatcaaactgtatgctgaaggacccaaagaactgaagggagaaccgggtgaaattggt
cagaaaggttgtcttggagatcctggtgtcccgggagaacctgggattaaaggagagaag
ggtgacagaggtgactctggttcactgggtaaaccagggaagaaaggattacagggagag
ttcggagagaagggacagcctggggatcctgggtacctcggtcctgctggtatcgttggt
attttgggagaaaaaggcagtcgaggccttccaggtcctccaggagaggtggttctcatc
aacatctttctgaaaggccagcgtggtgtcccgggccccgctggactcccaggagtccct
ggagatcaaggaataattggttttccaggcctgaagggtgaacaaggtgtggctctcgat
ggcccacctggttcccaaggaacacctggttcttctggtcccagaggagatccaggagag
cctggaccctcgatcacagggcctccaggacggacgggggttccaggtgttcgtggagcc
gaaggagagcctggagaaccaggaataccaaactttgtggtggtaggaactggtcttcca
ggagctaaaggtttacaaggtttgacaggacctcctgggctgaaaggggagattggtccg
aagggtgacaaaggagagatgtgttcagtctgcagtttagtttctggcctgcctggacct
ccaggtgacccaggggagccaggtgacagtggcatgcctggtgcagctgggattaaagga
accattggggacaaaggtctcaaaggtgtcgtaggaccgcctggtccaccgggtcgcttt
ggtcgtcctggccttgagggatccccgggacctgcaggtgagccaggaatcatgaggatg
gtggggcagaagggtgaggacggggacaaaggggagcctggacttcaaggacttgaaggg
acggatgggttctcaggagaaccaggacgtaaaggtgttcagggacagaaaggaaaccca
ggtcctccggggccaaaaggtgagagtggctcacttggtgaaactggtcccaggggcctg
acagggcagatgggacctacgggacaatttgggatcggagctccagggcctcaaggacct
aaaggagacattggatttttgggagagccaggagaacctggaaaacaaggtgaaaaaggt
gctccaggagaaagtataagttttccaggtgatccaggccagaaaggagagaaaggttta
tttggatacccaggacctgaaggtgtgaccggacctgcaggtcttcagggactgggggga
ccaaagggagaaaaaggacttgatggattatctatcccgggtttccctggcattatgggc
ttaaagggaaacaagggttctaaaggaaaaccaggttttcccagttttggcatcaagggt
cgagaggggccatctggccccccaggaacagttggcctgaaggggaacaggggtgttggt
gtaagaggcaaccagggtcagccaggtcctcaaggagaagatggctttgtcggaccgcag
ggacaacctggacctccaggatcacagggagttcctggactgagaggacaagtgggtctt
ccagggcccaaaggtcgtcgtggtctggatggtggtcctggtcctactggcctgactgga
gtctgtgtccctggaactccaggacctcgaggagtgcaaggaccaaaaggtgtcaccgga
ttcatagggatcaggggatccaaaggcctgaagggagatccaggatttccaggcaaggga
cccgtagggattcagggaccaacagggaaacaaggatttgatggcgctccaggatcaatg
ggaaatacgggacctaagggcctgagagggaacgatagggagccagggagtccagacaaa
caaacaccagatctacagatcctctcacagatgatgtccagattcaccctttggatcaga
ggaaacatgggtcacccaggaccgcctgggagtccaggacaagatggagttaaaggggaa
accggaccatcaggactgaaaggtcagaggggacaggatggggacaggggctctcagggg
accccaggggatcagggggacagaggagaacccggacagaaagggactgaagcaaacatt
acagtgttaggagcacctggagaccctggacaccaaggtgctcaaggttctacagggatc
aaagaagaaaggggcgcctcagggctgccaggtccaaatggtcgacaaggtgaatgtgga
atcccaggaccacaaggacctgttggagatccaggtagagatggagagaaaggtcttcct
ggtttcattggacctcctggtgatataggactccctggatggctgggttataaaggtgtg
aaaggttcaaaggggattggtggagttcctggtttaaacggactaccaggacaagatgga
tataaaggtgataaaggagaaccaagccaaccaggaccaggagctaaaggtccccctgga
gagaagggaatttcaggacttccaggaactccaggaccaaagggaccaccaggacactct
ggaaactttggtcctcaaggatcagatggaccctgtggacctaaaggacccccaggacca
cctggagggagaggtcctcctgggtatgtcggtgagaagggcttcgatggtcttccaggg
aacaacggccctccaggatgctccggacccccaggagctaaagggcctcctggaaatcct
ggtccaactggtcctaaagggaaccagggacaggacgggattcctggacctccaggagag
aaaggaaccatgggaggatgtggagtcggacctaatggaccagatggagacaaaggtgaa
ccgggatgtataggggagaggggcccccctggaccctgtggcccccctgggccctctggt
tctgcaggagacccaggcagccccggtactcctggaccccctggtcccgctgggtgtcct
ggaccagagggaccctgtatcaatggagtgaagggagacaaagggcttcctggagagaaa
ggaccccaaggcccacctggctataaaggtcctcctggccttccaggtcctggttataaa
ggtcataaaggatgtaaaggacaaccaggtcccccaggaccaactggtccttttggtgac
accggcccaccaggcagtcctggttgttgtggaccaccaggccctccaggaatgaaagga
acaagaggaggaaatgggcccaaaggaccgactggtatgaagggggagaaaggaccacca
ggtttcatcggaccacaaggaactcaaggactacctgggagacaaggagaaccagggagg
aacatgatcacaggtgtgaagttggaacctggacacccaggggaaaaaggggacatgggg
gacatgggagaaagaggcctcccagggcccacaggacaaactggagatcagggtgtgaat
ggcgacgctgggcagaaaggtcagacaggaaataaaggaagtaatgggctgagaggagaa
acaggaaacaaaggatcaactggtccaaagggtcaggcaggagagcgaggttacaaagga
gctaaaggcaacagtggtgaaccaggtaaaaggcccgtcccaccggttaaaaatggcttc
ctgtttaccagacacagccagagccgcaccgttccaaaatgtccgaatggatcctccttc
attttcagcggatattctctgctgttcatcaacggctacagccgagctcacggacaggac
ctgggaacgttgggtagttgtctccaccgtttcagcaccttgcccttcctgatctgtgag
tctagtggagaatgtaaatatgctgaacgcaatgactactcctattggctgtccaacatc
aaagatccgttgccagaaaacccttcgaccaacaccgaggagctgctgaaggctaaaatc
agccggtgttctgtgtgtgaggccaaagccaacgtgattgctgtccacagtcagaccact
tcacttccagattgccccgccaagtggaagactctttggtccggatactcctttgtaatg
gaaacaggtttgggagcggaggggtcaggccagccattggcctcagccggatcctgtctg
gaaaacttccataaaatgcctttcatcgagtgtaacggaagcccaggaaactgcaaacaa
gacagcagcgcctacagctactggctggctgctctggacagtcgcagcatgttcaaaaaa
ccaaaaggctggagcacttcaggggactctccggaaaaaatcagccgctgtcgagtctgc
atgaagcagatttaa |
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