Kryptolebias marmoratus (mangrove rivulus): 108249264
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Entry
108249264 CDS
T05608
Symbol
heatr1
Name
(RefSeq) HEAT repeat-containing protein 1 isoform X1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108249264 (heatr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108249264 (heatr1)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108249264 (heatr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_2
Cnd1
HEAT_EF3_N
RTP1_C1
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
108249264
NCBI-ProteinID:
XP_017294029
LinkDB
All DBs
Position
LG17:complement(26832501..26858290)
Genome browser
AA seq
2126 aa
AA seq
DB search
MTSLALQLKRLALPQSDPNLLTRKEVASLLFDPKDAAAMDRSTFYALGCTGLEELLGIEP
AFLEFQDTLFSPASMTLERSVQSKEVNEKLDAGISLFLTRLCPYFLLKPAHKCIEWLVHR
FHIQLYNVDSLLACALPYHDTNVFVRVLQLLKIRDASNRWNWLQPLQKPGVPLSRATLIT
HCYSDLSFMDFICTMVTRSIQAFSGLSDTFSQLRVIFSFYASTIVPALDAVDKVSDSIIA
KLLPYVQTGLKSPLLDFKATSYMIVCQLAVKVVMEAGLVNSLAVHVSKSLLKEPVLAQEG
LGCLTVLLQNQKEGSAGPRAVGQLCSMPALVSTLQVLAATHDVSPLLRYLLPHLVQNLFL
CSSGEVDRLVVLESILKSVPLTKDLDRIVAQLLLDQYLSQTERSAKDLLILDQTLLPLVQ
LFESRYGGALDDVLAGHVADKQQKRLFHRFLSLSMSSGKYEILGDSDTSLLLSLKHPQPS
VRVSAVEHLMGLISSGQQQSLDEGFLKDAVMERLKDDVPEVVAAALRVLQMLLDVLEPED
VVLCLLSLLDRAETSLAEPWLPVLMVAVRLLSDPRLGKGDAEFVQRTGWKLLPFLVITSA
ELELAVCVAQCSILAQNPLTHNWAHELDEVMKRRSKPGFVGSANQRLVSTLSRNLGDMEL
FSRRDALDKLLVLVEQQRGSGLRGRASFLVLTQTLLLGLRELSETQHLLTAQRVYTVLEP
PLLEGSGTDGAQEISLHPCVPASFSEALTLYLSRCEEQQGKRLDQFSSVLMVLLRDFVST
LRCPDASFKGESWWNPEKLDTNTCCYLGLICRLFSLVLSGSAEGPMAGSFRDLMKLLVQV
HLPEPPTLFRFLCVLWGYGRNHGDQLDVKVDAVLQTRALYMGRVLLDGSPVPTLDELAAA
DSPVVPSLLCSLTSLVQEVRRAALSTLQSLSEASSSPFQPITERLLKTSEELVADPSYLN
TVLGVLHDESSSSKQKKLKASLQHLLQSVQNPRCPSYSAAGLLRALSLVNGQSVLSALLP
VLDRLLDQTGPDSPSLLPDETQLLQLVLGKFNEASAPLLGQDQNSLDLFIRALKLPGCQV
FALEQITKPFFSALRDEKVQQKLLSEMFDLLVESRSPLVANTVSSVFKTIAVDAQLVANE
LAPPEKPRVSVTVQQTRRSKMTLRKAQDSGGVDPEGGAVPWQRVTLILELLQHKKKLKRA
QALVPVLFSLLSRCLDPCAGDPADMEYSKQLLLCCLLNICNKLSADGGLAAADLLDEEKF
SVELVVQCIRESDVPQTHHHALLLLGGVAPIFPEKVLHNIMPIFTFMGANILRLDDAYSF
RVIEKTLQMVIPALIQAHRLSDGSSSSSMVVVVTRIMHVFADALPHVPEHRRLPILSQLV
TTLGPSHFLWVLMLLLLKLHATQSSGGEKDAALERDGDFWVSLCCQFDVSDQLTTIINIL
NFLLQLPDDRGEAKCAVGRRAAKKKEEEKVEEVIFSVEAHSSKELRHFKFLCVSFMAQLL
GSSSFIQKVAEGGDAVSSSLQQLQQRLLEDVLRYIQSVARCVEENADKPTAKFWRVLLNK
AYEVLDKVNALLPTDTFITVMRGLMGNELALVRRKAMELLNNQLQHRAQWDEQQVLELLQ
LTSDLLTIVAKSHTKGSEEAELAINRQTALYSLKLLCRSFGSTHQEAFVPVLQQAVDIVT
ATEEEKNVTASALLCIAEVVNALKALAIPQLPRLMSAVLHALTDRKELLTTEIYLLSTVT
ALQRITESLPHFISPYLQDTTLQVCRLTRLLETSSSSSSSSSSSQLVARLSSLRTTLASK
LPPRVLLPTLSRCYSSIVLEKKDQLGALMSVLKEHIGHMTKEQLSFHQSELTTFFLTALD
FRAKHCQGDLQITSQVEGGVIDCLIAMVMKLSEVTFRPLFFKLFDWSKSDRKDRLLTFYR
LCDGVAERLKGLFVLFAGNLVKPLADVLRRTNSSSADELIFDSDRSEEKNCLLLQLVLDC
LQKIFLYDTQNFLNRDRADALLVPLVDQLENCLGGSQVYQNRVTQHLVPCVGQFSVALAD
DSQWKTLNYQILLKTRHSDPKVRFSSLVMLMELASRLKENYVVLLPETIPFLAELMEDEC
EEVEQQVQKVVQEMENILGEPLQSYF
NT seq
6381 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgttagctcttcagctgaagaggctcgctctgcctcagagtgaccccaacctt
ctgacccgtaaggaggtcgcctcgctgctctttgaccctaaagatgctgcggctatggac
cggagcaccttctacgccctcggctgcacggggctggaagagctgctgggaatcgaaccg
gcattcctggagttccaggacactttgtttagccccgcctccatgactctggagcgcagt
gtccaatccaaagaggtcaacgagaagctggacgcaggcatctcactcttcctcacccgc
ctctgtccgtacttcctcctcaaaccggctcacaagtgcatcgagtggctggttcaccgc
ttccacatccagctgtataacgtcgacagcctgctggcgtgcgcgctgccgtatcatgac
accaacgtcttcgtcagagtcctgcaactgctgaagatcagagacgcctccaaccgctgg
aactggctgcagcctctgcagaaaccgggcgtgcctctgtccagggcaactctgatcact
cactgctactcagacctgagcttcatggacttcatctgcaccatggtgacccggtccatc
caggcattctccggcctctcggacacgttctcccagctcagagtcatcttctccttctac
gcctccacaatcgtccccgctctggacgctgtggacaaagtttctgactccatcatcgcc
aagctgctgccctacgtgcagacgggtctaaagtcgcccctgctggacttcaaagccacc
tcctacatgatcgtgtgccaactcgccgtgaaggtggtgatggaggcgggtctggtgaac
agcctcgccgtgcacgtcagcaagtctctgctcaaagagccggttctggcccaggagggt
ctgggctgcctgacggtgctgctgcagaaccagaaggaaggttccgccgggcccagggcg
gtgggccagctgtgctcgatgccggcgctggtctccacactgcaggtcctggccgcgact
catgatgtcagtcctttgctgaggtacctgctgcctcacctggtccagaacctgttcctc
tgcagctcaggtgaggtggacaggctcgtcgtgttggagtccatcctgaaatctgtccca
ctgaccaaagacttggaccggatcgtggcccaattgctgttggaccagtatctgagtcaa
actgaacgttctgccaaggacttgttgattctggaccagactcttctgcctctggtccaa
ctgtttgagtccaggtacggtggagctctggacgatgtccttgctggtcatgtggcagac
aagcagcagaaacgtctcttccaccggttcttgtccctgtccatgagcagcgggaaatat
gagattttaggcgactcggacacgtcgctgctcctcagtctgaaacatccacaaccatcg
gtccgagtgtcggctgtggagcatctgatgggactcatctcctctggacagcagcagagt
ttggacgaaggcttcctgaaagacgccgtcatggagcgtctgaaggacgacgttcctgaa
gtggtcgcagcggcgctcagagttctgcagatgctgcttgatgttttggaaccggaggac
gtcgtgttgtgtttactgtctctgttggacagagctgaaacgtccctggctgagccgtgg
ctgcccgtactgatggtggcggtgcgtttactgtctgacccccggctgggaaaaggcgat
gctgagtttgtacagaggacaggctggaagttgcttcccttcctggtgatcacctcggct
gagctcgagctcgccgtctgcgtggcccaatgctccatcctcgcccagaaccccctcacc
cacaactgggcccacgagctggatgaggtgatgaagagaaggtccaaacccgggtttgtt
ggttctgccaaccagcgtctggtctccacgttgagcaggaacctgggagacatggagctg
ttctccagacgggacgctctggacaaactgcttgtgttggtggagcagcagcggggatcc
ggtctcagagggagggcctccttcctggttctgacccagactctgctgctgggtctaagg
gagctgagcgagacccagcacctgctgacggctcagagggtctacacagtgctggagccc
cccctgctcgagggcagcgggactgatggtgctcaggaaatctccctgcatccctgcgtc
cctgcatccttctctgaagccctgacgctctacctgagcaggtgtgaggagcagcaaggt
aaacgtttggaccagttcagctcagttctgatggttctgctcagggactttgtctccacg
ctcaggtgtcctgacgcctccttcaaaggtgagtcctggtggaacccggagaagctggac
accaacacctgctgctacctgggcctgatctgtcgtctcttcagcctcgtcctcagcggc
agcgccgagggtccgatggcaggcagcttcagggacctgatgaagctgcttgtccaggtc
cacctgccggagccgccgaccctcttcaggttcctttgtgtcctttggggatatggtcgt
aaccatggagaccagctggatgtgaaggtggacgccgttctgcagacccgggctctgtat
atgggtcgagttctgctggacggctcacctgtccccacgctggacgagctggcagctgca
gactcacctgttgtcccatccttgttgtgcagtctcacttctctggttcaggaggtccga
cgggctgccctcagcaccctgcagagcctatcagaagccagcagctccccatttcagcca
atcacagagcggctgctgaagacctcggaggagctggtggccgacccgtcctacctgaac
acggttctgggtgttcttcatgacgagtcttcatccagcaaacagaagaagctgaaggcg
tcgctgcaacatctgctgcagagcgtccagaacccccgctgcccgtcctacagcgccgcc
ggcctgctgcgagctctcagcctcgttaacggacagtccgtcctgtccgccctgcttcct
gttctggaccggctcctggatcagacaggtccggactctccatccctgctgccagatgag
acccagctgctgcagctggttctggggaagtttaacgaggcgtcggcgccgctgctgggc
caggaccagaacagtttggacctgttcatcagagctctgaaactgcccgggtgtcaggtc
ttcgctctggagcagatcacaaagcccttcttctcggctctcagagacgagaaggtgcag
cagaagcttctgtcggagatgttcgacctgctggtggagagcaggagccctctggtggcc
aacaccgtcagcagcgtcttcaaaacgatcgctgttgatgctcagctggtggccaatgag
ctcgctcctccagaaaaaccacgagtcagtgtgacggtgcaacaaacccgccggagcaag
atgactctcaggaaagctcaggacagtggcggtgtggatccagaggggggcgctgtgccg
tggcagagagtcactctgatcctggagctgctgcagcacaagaagaagctgaagagggcc
caggcgttggtgccggttctgttctctctgctctccaggtgtttggacccgtgtgcagga
gacccagccgacatggagtacagcaagcagctgctgctctgctgtttgctcaacatctgt
aacaaactgtcggctgatggaggtctggcagctgcagacctcctggatgaagagaagttc
agcgtggagctcgtggttcagtgcatcagagagtctgacgtgccgcagacgcaccaccac
gctctgctgctgctgggcggcgtcgcccccatcttccccgagaaagtcctccacaacatc
atgcccatcttcaccttcatgggcgccaacatcctgcgtctggatgacgcctacagcttc
agggtgatcgagaagacgctgcagatggtcatacctgcactcatccaggctcaccgcctc
tcagatggctcctcctcctccagcatggtcgtcgtggtgacgaggatcatgcatgtgttt
gccgacgcgctgcctcacgtgcccgagcaccggcggctgcccattctcagtcagctggtg
acaacgcttggcccctcccacttcctgtgggtcctgatgctgctgctgttgaagcttcac
gccacccagagcagcggtggcgagaaggatgcggctctggagcgggacggggacttctgg
gtctctctgtgctgtcagttcgatgtcagcgaccagctcaccaccatcattaacatcctg
aacttcctgctgcagctgccggacgacagaggcgaagcaaagtgtgctgtcggccggcga
gcagcaaagaagaaggaggaggagaaggtggaggaggtgatcttcagcgtggaggctcac
agcagcaaggagctgcgacacttcaagttcctctgcgtctccttcatggcccaactgctc
ggctccagcagcttcatacagaaggtcgcagaaggaggcgacgccgtcagctcgtctctg
cagcagctgcagcaaaggctgctggaggacgtccttcggtacatccagagcgtcgctcgc
tgtgtggaggagaacgctgacaaacccactgccaagttctggagagttctgctcaataag
gcctacgaggtcctggacaaggtgaacgccctgctgcctacagataccttcatcacggtg
atgagggggctgatgggaaacgagctggcgttggtgcggaggaaggccatggagctgctg
aacaaccagctgcagcaccgggcgcagtgggacgagcagcaggtgttggagctcctgcag
ctgacctctgacctgctgaccattgtggctaagagtcacactaagggctcagaggaggcg
gagctagccatcaacaggcagaccgcgctctacagcctcaagctgctctgtcgcagtttt
ggctccacccaccaggaggcgtttgtccccgtcctgcagcaggcggtggacattgtcacg
gcaacagaggaggagaagaacgtgacggccagcgctctgctctgtatcgccgaggtggtc
aatgcactgaaggcgctcgccatcccacagttacccaggttgatgtcagctgttctgcac
gcgctcactgacaggaaggagctgctgaccactgagatctacctgctgagcaccgtcaca
gctctgcagcgaatcacagagtcgctgccacacttcatcagcccatacctgcaggacacc
accttacaggtgtgtcggctgacccggctcctcgagacctcctcctcctcctcctcctcc
tcctcctcctcgcagctcgtcgcccgtctctcctccctgaggaccacgctggcctccaag
ctgccccccagggtcctcctgcccaccctgtccaggtgctacagcagcatagttctggag
aagaaggaccagctgggggcgctgatgagcgtcctgaaggaacacatcggtcacatgacc
aaagagcagctgagcttccaccaatcagagctcaccaccttcttcctcaccgcgttggac
ttccgggccaaacactgccagggcgatctgcagataacgtctcaggtggagggcggagtc
attgactgtctcatcgccatggtgatgaaactgtccgaggtcacgttcaggccgcttttc
ttcaagctgtttgactggagtaaatcggaccggaaggaccgcctcctgacgttttaccgg
ctgtgtgacggcgtcgccgagcgcctcaaaggactcttcgtcctgttcgcaggaaacctg
gtgaaaccgctggcggacgtcctgagacggaccaacagctcctcggcggacgagctgatc
tttgactcggaccggtccgaagagaagaactgtcttctgctccagttggtcctggattgt
ctccagaagatcttcctgtacgacactcagaatttcctgaaccgggaccgggccgatgcc
ctgttggttccgctggtggaccagctggagaactgtctgggtgggtcacaggtctaccag
aaccgggtcactcagcacctggttccctgtgtgggtcagttctctgtggctctggccgat
gactctcagtggaaaaccttgaactaccagatcctcctgaagaccaggcacagtgacccc
aaggtccggttctcctccctcgtcatgctgatggagttggcatccagactgaaggagaac
tacgtggttctgctgccggagaccatcccgttcctggcagaactcatggaagatgagtgt
gaggaggtggagcagcaggtccagaaggtggttcaggagatggagaacatcctgggagaa
cctctgcagagctacttctaa
DBGET
integrated database retrieval system
