| Entry |
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| Symbol |
prdm1b
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| Name |
(RefSeq) PR domain zinc finger protein 1 isoform X1
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| KO |
| K24501 | PR domain zinc finger protein 1 [EC:2.1.1.-] |
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| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
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| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:kmr03000]
108249346 (prdm1b)
Transcription factors [BR:kmr03000]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108249346 (prdm1b)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
LG5:complement(179174..199362)
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| AA seq |
696 aa
MKLEGTPEDPSIWREMDFAINCTYIVPDQVSDPSFSLPKAMTSIPRNLTFDYSTDNEVTG
VFSKEYIPQGTRFGPLQGDIYTKDGVPNEANRKYFWRIYSGGQLQHFIDGFDVHNSNWMR
YVNPAHSLAEQNLVACQNGRDIYFYTIRPVESKQELLVWYSQEFAQRLCNQQDELRHKCS
NEELTKQSLPHQTWLQDRTKEEQREEVSEEKIEVEMFERDTPPDTPDEQIVDFSKKMEKQ
PEQNEHTLGYNHLYLPDHHPSLSAPHRNLPLHLHGLYNHREGLVSSYPLYSQSRPLQPPY
EFLFPYGPHYPRFLLPSYSPPFPGILSSKGSLQYSSYLGSDGLPYPPVSSPSLLPVSLPY
APCPQGGLKELTPNVSPLRGTPATPELSPPAKPDIHHQLPDPSPSVREEAMNLSLSTSKT
TTTQHNGPGHKSLPYPLKKQNGKIKYECNICSKTFGQLSNLKVHLRVHSGERPFHCHLCK
KSFTQLAHLQKHHLVHSGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCNTKFT
QYIHLKLHRRLHSSRDRPYRCQLCTHSFFHRFSLYIHQHSCCPTSSNAFVNAHMKEMVER
FDASQEADTLAETASASQVGEAAERWLTRTLEGEGNGDQKEATVLLKTLTAVINTPVTPV
ARSAVPAPHHNTPLAFQERASVVHLNKRPTVKTEGQ |
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| NT seq |
2091 nt +upstreamnt +downstreamnt
atgaagctggagggcacaccagaagacccgagcatttggagggagatggactttgctatc
aactgtacatacattgttccagatcaggtgtcagacccaagcttcagcctgcccaaagcc
atgacctccatcccacggaacctcacattcgactacagcacagacaacgaggtaacaggt
gtgttcagcaaagagtacattcctcaagggactcgctttgggcccctgcaaggagacatc
tacaccaaagatggtgtacccaatgaggccaacaggaagtacttctggaggatttacagt
ggcgggcagcttcaacacttcattgatggctttgatgtccacaacagcaactggatgcgt
tacgtgaatccagctcattccctagcagagcagaacctggtggcctgccagaacggccga
gacatctacttctataccatacgaccggtggagtccaaacaggagctgctggtgtggtac
agccaggagttcgcccagagactctgcaatcagcaggacgagctccgacacaaatgcagc
aacgaggagctcaccaaacagagtctacctcatcagacatggctccaagacagaacaaaa
gaagaacagagggaggaagtcagcgaggagaagatagaagtggagatgtttgagagagac
acacctcctgatacacctgatgagcagatagtggacttcagcaaaaagatggagaagcag
cccgaacagaacgagcacaccttgggctacaatcacctttacctaccggatcaccacccc
tccctctcagctccacacagaaacctcccccttcacctccatggcctgtacaaccacagg
gaggggcttgtctcctcctaccctctctactctcaatccagacctcttcagcctccatac
gagttcctttttccatatggtcctcactatcctcgcttcctccttccttcctactcccct
ccttttcctggaattctgtcctcaaaaggatccctccaatacagcagttatctggggtct
gacggactcccatatcctccagtcagctcacccagcttgctcccagtgtcactcccgtat
gctccatgcccacaaggaggcctgaaggaactaacaccaaacgtttccccactaagaggc
accccagcaaccccagagctgtctccccctgccaagcctgacatccatcatcagctcccc
gatccgtccccttctgtccgtgaggaggccatgaacctcagcttgagcacaagcaagacc
accacaacgcagcacaatggccctggacacaaatccctgccctaccctcttaagaagcaa
aacggaaagatcaaatatgaatgtaacatctgctccaagacatttggacagctatctaac
ctgaaggtccatctgagagtgcacagcggtgagagaccatttcactgtcacctgtgtaag
aagagcttcactcagctggcccacctgcagaaacatcacctggtccattcgggagagaaa
ccacacgaatgtcaggtatgccataaacgcttcagcagcaccagtaacctgaaaacacac
cttcggctgcactctggagagaaaccttatcagtgcaagctgtgcaacaccaagttcacg
cagtacatccacctgaaactgcaccgccgcctccacagcagccgcgaccggccctaccgc
tgccagctctgcacccactccttcttccaccgcttttctctctacatccaccagcacagc
tgctgccccaccagctccaatgcttttgtcaacgcgcacatgaaggagatggtggagcgc
ttcgatgccagccaagaggcagacacactcgcagaaacagcatcagcctctcaggtgggg
gaagctgctgagcgctggctaacccgtaccctggaaggagagggtaatggggaccagaag
gaggccacggtactgctcaaaactctgacagcagtgatcaacacaccagtaacacctgtg
gcccggtctgcggtaccagcaccacaccacaacacacctctggcctttcaggagagggcc
agcgtggtacatctcaacaaacggccaacagtgaaaacagaaggacagtga |
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