Kryptolebias marmoratus (mangrove rivulus): 108249382
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Entry
108249382 CDS
T05608
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108249382 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108249382 (runx1)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
108249382 (runx1)
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
Motif
Other DBs
NCBI-GeneID:
108249382
NCBI-ProteinID:
XP_037829845
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Position
LG23:16607947..16648923
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AA seq
497 aa
AA seq
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MDVWMDLQNNRKTFRESSLFFPTDPAPGRRYTPPSTSLATGGKMAEALPLGAQEPGGGGA
LMGKLRIADHGMAEVISDHPGELVKTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDIPD
GTLVTVMAGNDENYSAELRNATAAIKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPTQV
ATYQRAIKITVDGPREPRRHRQKLDEVKAGSLAFSERLTELEQLRRSSIRVTPPHHHHHQ
SSANSRQSAVLNSATFSSPPHSQITADSRQMQSSPSWSYDQSYSYLGQITTPSVHTANPL
SPSRSSLSDLSSRLTGPDLAAFGDPRMTLERPFTSLPSLPDSRFSDPRVHYPPTAAAFSY
TPSHNSVSNGTLGITMATAIATTPTGRYHTYLPPPYPPNTPHQAQNGPFQSTSSPYHLYY
STTTGSYQFSMMAGGGSSSDSRSPPRILPPCTNASTGSSLLHPSLPNQNEGVNVEVESSH
SSSPTNMAAAEAVWRPY
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatggatggatttacagaacaacagaaaaacatttagagaatcttcccttttt
ttccccacagacccagctcctggccggcgttacactcccccctccacctcacttgccaca
ggagggaaaatggccgaggcactgcccctaggagcacaggagcctggtggagggggtgct
ctaatgggcaaactgcgcatagctgaccacggcatggcagaggtgatctcagatcatcca
ggagagttggtgaagactgacagtccgaatttcctctgctcggtgctgcccacccactgg
aggtgtaacaagacactacccattgcttttaaggtggtcgccctgggtgacatccctgat
ggcaccttggtaacagtgatggctggaaatgatgagaattactcagcagagcttcgtaac
gccacagctgccatcaagaaccaagtggcaagattcaatgacctgcgctttgtgggccgc
agtggaagaggaaagagtttcactttgacaatcacggtattcaccaaccccacccaggtg
gctacgtatcagagggctattaaaattacagttgatggtcccagagagccacggcgtcat
cgtcagaaactagacgaggtcaaagctggctctttggcattctctgagaggctaacagag
ctggaacagctaagacggagctccattcgagtgacccctcctcaccaccatcatcatcaa
tcctctgcaaacagccgccagtctgcagttctcaattctgcgacattctccagccctcca
cactctcaaataacagctgattccaggcagatgcagtcatctccatcttggtcctatgat
cagtcctattcatatcttggtcagataactactccttctgtccacacagccaatccactt
tcacctagtcgatcctccctcagtgatctgtcctcaagacttacaggtcctgaccttgca
gcctttggtgaccccaggatgaccttagaacggccttttacttctctcccctccctgcct
gactcccgtttctctgatccccgggtgcactaccctcccacagcagctgcgttctcctac
acaccgtcccacaactctgtctctaatggtacccttggcatcaccatggcaacagccatt
gcaaccaccccaacagggcggtaccacacatacctgcctcctccctatccaccaaacacc
cctcaccaagcgcagaatgggcccttccaatccacttcgtcaccatatcatctgtactac
tccaccaccactgggtcgtaccagttctccatgatggctggaggaggaagcagtagtgac
tcacgctcaccaccaagaatcttgccaccatgcaccaatgcctccacgggctcttctctt
ctgcacccttctttacccaatcagaatgaaggagtaaatgtggaggtggaatccagccat
agtagctctccaacaaacatggctgccgccgaagctgtatggagaccttactga
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