Kryptolebias marmoratus (mangrove rivulus): 108249483
Help
Entry
108249483 CDS
T05608
Name
(RefSeq) E3 SUMO-protein ligase ZBED1 isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108249483
04121 Ubiquitin system [BR:
kmr04121
]
108249483
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
108249483
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108249483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
CBF
Motif
Other DBs
NCBI-GeneID:
108249483
NCBI-ProteinID:
XP_017294384
LinkDB
All DBs
Position
LG12:25228639..25232816
Genome browser
AA seq
647 aa
AA seq
DB search
MASSGEISIEDAPATFKSFVWRHFGYPVVTINGDRVTDKTRTICKHCKKISPYTSANTST
MHRHLQNHHRSLLDQHENPQNRHRPPRNHRKSLFKPAAVAVKAEPSRQTEPPQLPQLTDR
AAEITRDIGIFIAADLTPFSVVENVGFKRLLNTLEPNYTIPTRGHFSHTVVPSLYKECKT
RVVQVLKDAESVAMTTEAWSFRGTLSYVTVTAHAMSSAWEMVNVVLLTRPLFDSRTGANM
AEVLLEAVSEWELKKPNRSIAIVTDDVDNTEVAVRQVGLEPQVQCFAHTVNLATRAGLGV
TRVTALLGRMRRVISVFQSPTAAAVLKFKQKLLQLPCQALSTDVRTRWNSTLDMLSRYLE
QQAAIAGALSSPDLGLNTQIDALDSNDMRDTEDLVRLLDPLKTATTVLCEEKSPPVSLIV
PLKSMIEQSMTPNHDDSTTVADTKRAILSNISGTYSGDIYNFLLECTALDPRFRTLPLLD
GNQREAIFLRVQKKVKRLQTQTLAAKKTQQKAEEATPSHGENWDLKSESELTEPASKKTA
LEDLLGDSFSPEPECSNVSEQIRREIEHYRREASIPLSSCPLRWWKENSPQYPLLSPLAK
AYLSIPVTSVPSQRVFSAAGDIVNAQRSQLLPEHLDMLIFLNQNMTV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtctggtgaaattagcatcgaagacgctcccgccacctttaaatcgtttgtg
tggcggcacttcgggtacccggtagtaacgataaacggtgaccgagtgacagacaagacc
cgaaccatctgtaagcactgtaagaaaatatctccgtacacctcggctaacacgagcact
atgcacagacacctacagaaccaccacaggtctttgctggaccaacacgagaatccacag
aaccgccacagacctccccggaaccaccgcaagtctctgtttaagcccgcagcggttgca
gtgaaggcggaaccgagcagacagacagaaccgccccagcttccacagctgactgacaga
gccgctgaaataactcgagacatcggtattttcatcgctgccgacttgacgccattttct
gtggtggaaaatgtggggttcaagcggctgctcaacacgctggaaccgaactataccatc
ccgacacgcggccatttttcccacacggtggttccgagcttgtacaaagaatgcaagaca
agggttgtacaagttttaaaggacgcggaaagcgtcgccatgacgaccgaggcttggtct
ttcagaggtacgttgagctacgttacagttacagctcacgcgatgagtagcgcgtgggaa
atggtgaatgttgtgctcctgactcgcccactgttcgactcccgcacaggagcaaacatg
gcggaggttttgttagaagctgtctctgagtgggaacttaagaagccaaaccgtagcatc
gccatagtaactgatgacgtagacaatacggaagtagcggtgcgccaggtaggactggag
ccccaagtccagtgctttgcacacactgtaaacctggcgacccgggctggcctcggcgtg
acgcgggtcacggctttgctcgggcgcatgagacgtgtaatttctgtgtttcagagtccg
acagctgccgcggtgctgaagttcaagcagaagctgctccagctaccgtgccaggcttta
agcacggacgtcagaacacgatggaacagcaccctggacatgctgagccggtacctggag
cagcaggccgccatagcaggagcgctcagcagcccggacctcggactcaacacccaaatt
gatgcactggacagcaacgacatgagagacactgaagacctggtgaggctgctggatcct
ctgaagacggcgaccacagtcctgtgtgaggagaagagccccccggtgtctctcattgtg
ccactgaagagcatgatcgaacagagcatgacaccaaaccatgatgattccaccactgtg
gctgacactaagagagcaattcttagtaatatttcaggcacatacagtggggacatttac
aactttctactggagtgcacagcactggacccgaggttccggacactacccctactggac
ggcaaccagcgcgaggccatcttcctgagggtacagaagaaggtgaaacggctgcaaact
cagaccttagctgctaaaaagactcagcagaaggcagaagaggccaccccctcacatgga
gaaaactgggatctgaaatcagaatcagaactgacagaacccgcgtccaagaagacggca
ctcgaggacctgctgggggactctttctctcctgagccagaatgttccaatgtctcagaa
cagatccgcagagagatcgaacactacagaagagaggcctctatccctctcagtagctgc
cctctgaggtggtggaaagaaaactctcctcagtatcctttgctgtctccacttgccaaa
gcatatctgtccattcctgttacctctgtcccaagtcagcgggtcttttctgctgcaggg
gacatagttaacgcccaaaggtctcagctactgccagaacacctagacatgctcatattc
ctgaaccagaacatgaccgtataa
DBGET
integrated database retrieval system
